BAC Information

Click to search

BAC

Clone NameB6Ng01-318L03
Chromosome6 (Build37)
Map Location 75,254,166 - 75,255,155
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668132, LOC668136, LOC621306
Downstream geneLOC100042942, LOC668143, EG668145, EG546907, LOC100042952
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318L03.bB6Ng01-318L03.g
ACCGA108516GA108517
length9931,136
definitionB6Ng01-318L03.b B6Ng01-318L03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacaggaagacccacagtgtcaactaacatggacacatggggcc
tctcagagactgaatcaccaaagagaatgcaagagctgaagtgagcccac
actcctcgagggcacatatgtagcagaaacacagcttggtcttcatgtgg
ggcctccaagaactgttgcctgcccatggatcctgttttctctgccttgc
cttgtctggcctcagtgggagaggaagtgcctagtcctatattaacttta
cataccaggataggttggtacatgtgtgggagagggcatccccttcaccg
agaaggagagagcagaggtgtgttatataaaatggtgactaagcagagaa
tggaagactgcgatcaggatgtgaataaaaaaaaaaaaaaaagaaagaaa
gacataacaaaatacattcactttacactcttcctttccttgttccttga
tatcataaatcactctaaaatgaattctttattgtggttaatttacatga
acttgcttagagctaaaaattaaatgaataaataacaatgtttactgaat
gaaatggatttttctatctagaacaattacattcttttcacacactattt
tcaaatgaagaatataattgtaggaaacaaattattatttgccaaattac
acaggtagatatttacatagttttacataagagtatttatgtccttcata
cacatcagtaatagaaataaacattttcccagaaaaatattatctcaaac
tgttatatgaaaagttacagtataaatataaaaataaatacataggtaca
tacatacacacacacattatgtttacaacataatcaattaagacaaaatt
taacttacagaaaataaagttagtttcagatcacaggattttaaaggttg
atgcttccttatttttctttgccatcttcataagtcttagaacatctctg
atgtttcttcttttttaaagttgttacctttaatttgtgtgtg

gaattcttttgcagttaaggagagagagaacaaaaaaatatatgcttgct
gtctcctaagaatcaaagggctgggtttgggtcaatggatgctgattcat
aagataataaaaaggaaatgataatcaaaagatattcaaaatgactggat
tgatatgaaaataaaagactagagcaggagatgaacaagccagagaaatt
ttttaagataaataaaggagagaactgcttgaaaaactgacacacactca
agcaagcagaatatggacagagagataaatatcttggaataacattcaaa
cggaatattgacagagaaatcttcagagcgaaagtagaacacagagaaaa
tcagactggaaaaggtagatcaagcaaaacacgggtcgtcatcttagatc
catgatttgactatgagtccttcttttgccactctcagacaccacttctc
tcagaactcttctccaggctgagtttgcagagaacaatcctgtgacctag
catcagccaggattatttgggtatttctataagaccaccacaataaactc
aaccatttgaaacatagtcccaccacaaggaaactttacgggcttcaaga
gatggacagttcaaataccatatcctccattactaggaggactcagaatc
accaacatagattccaggatgtttcaatggtactagattcccacactgtg
cttccattccatctgtttctctctgtactctctctctctctctccatcca
gtttaactggtccattctgctccattccacacactaccagcccaccagaa
aatctcttctatttctcctttttaagaagatccatgtagcctctctagag
ccttcctttttacttaacctctctaggtctatataacatctttgttatac
ccaatagctaatatccatttattagaaaatatataatgcataatgtattg
tctttctgatctggttacttcactcagaatatatatatatatatatatat
atatatatatatatattatatttttcagtgcgatgcgagttggtctggaa
acttcaatgatgcccactttaaatagctggagttatactcatagtaatgt
acttagagctataggtaagttgaagatgaaccttgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_75254166_75255155
seq2: B6Ng01-318L03.b_48_1040 (reverse)

seq1  CACACACAAAT---AAGTAACAACTTTAAAAAAGAAGAAACATCAGAGAT  47
      |||||||||||   | ||||||||||||||||||||||||||||||||||
seq2  CACACACAAATTAAAGGTAACAACTTTAAAAAAGAAGAAACATCAGAGAT  50

seq1  GTTCTAAGACTTATGAAGATGGCAAAGAAAAATAAGGAAGCATCAACCTT  97
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAAGACTTATGAAGATGGCAAAGAAAAATAAGGAAGCATCAACCTT  100

seq1  TAAAATCCTGTGATCTGAAACTAACTTTATTTTCTGTAAGTTAAATTTTG  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCCTGTGATCTGAAACTAACTTTATTTTCTGTAAGTTAAATTTTG  150

seq1  TCTTAATTGATTATGTTGTAAACATAATGTGTGTGTGTATGTATGTACCT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAATTGATTATGTTGTAAACATAATGTGTGTGTGTATGTATGTACCT  200

seq1  ATGTATTTATTTTTATATTTATACTGTAACTTTTCATATAACAGTTTGAG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTTATTTTTATATTTATACTGTAACTTTTCATATAACAGTTTGAG  250

seq1  ATAATATTTTTCTGGGAAAATGTTTATTTCTATTACTGATGTGTATGAAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATTTTTCTGGGAAAATGTTTATTTCTATTACTGATGTGTATGAAG  300

seq1  GACATAAATACTCTTATGTAAAACTATGTAAATATCTACCTGTGTAATTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAAATACTCTTATGTAAAACTATGTAAATATCTACCTGTGTAATTT  350

seq1  GGCAAATAATAATTTGTTTCCTACAATTATATTCTTCATTTGAAAATAGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAATAATAATTTGTTTCCTACAATTATATTCTTCATTTGAAAATAGT  400

seq1  GTGTGAAAAGAATGTAATTGTTCTAGATAGAAAAATCCATTTCATTCAGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAAAAGAATGTAATTGTTCTAGATAGAAAAATCCATTTCATTCAGT  450

seq1  AAACATTGTTATTTATTCATTTAATTTTTAGCTCTAAGCAAGTTCATGTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTGTTATTTATTCATTTAATTTTTAGCTCTAAGCAAGTTCATGTA  500

seq1  AATTAACCACAATAAAGAATTCATTTTAGAGTGATTTATGATATCAAGGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAACCACAATAAAGAATTCATTTTAGAGTGATTTATGATATCAAGGA  550

seq1  ACAAGGAAAGGAAGAGTGTAAAGTGAATGTATTTTGTTATGTCTTTCTTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGAAAGGAAGAGTGTAAAGTGAATGTATTTTGTTATGTCTTTCTTT  600

seq1  CTTTTTTTTTTTTTTTTATTCACATCCTGATCGCAGTCTTCCATTCTCTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTTTTTTTTTTTATTCACATCCTGATCGCAGTCTTCCATTCTCTG  650

seq1  CTTAGTCACCATTTTATATAACACACCTCTGCTCTCTCCTTCTCGGTGAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTCACCATTTTATATAACACACCTCTGCTCTCTCCTTCTCGGTGAA  700

seq1  GGGGATGCCCTCTCCCACACATGTACCAACCTATCCTGGTATGTAAAGTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATGCCCTCTCCCACACATGTACCAACCTATCCTGGTATGTAAAGTT  750

seq1  AATATAGGACTAGGCACTTCCTCTCCCACTGAGGCCAGACAAGGCAAGGC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGGACTAGGCACTTCCTCTCCCACTGAGGCCAGACAAGGCAAGGC  800

seq1  AGAGAAAACAGGATCCATGGGCAGGCAACAGTTCTTGGAGGCCCCACATG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAACAGGATCCATGGGCAGGCAACAGTTCTTGGAGGCCCCACATG  850

seq1  AAGACCAAGCTGTGTTTCTGCTACATATGTGCCCTCGAGGAGTGTGGGCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCAAGCTGTGTTTCTGCTACATATGTGCCCTCGAGGAGTGTGGGCT  900

seq1  CACTTCAGCTCTTGCATTCTCTTTGGTGATTCAGTCTCTGAGAGGCCCCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCAGCTCTTGCATTCTCTTTGGTGATTCAGTCTCTGAGAGGCCCCA  950

seq1  TGTGTCCATGTTAGTTGACACTGTGGGTCTTCCTGTGGAATTC  990
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCCATGTTAGTTGACACTGTGGGTCTTCCTGTGGAATTC  993


| Home | SequenceCutter | Blast | Download |