BAC Information

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BAC

Clone NameB6Ng01-319K16
Chromosome6 (Build37)
Map Location 67,237,838 - 67,238,935
singlet/doubletsinglet
Overlap genenone
Upstream geneTpm3-rs3, LOC627751, Mad2l1, V1rc15, LOC100041941, Aurkb-ps, V1rc14, LOC546901, V1rc12, LOC627833, V1rc11, V1rc10, LOC100042816, LOC546902, V1rc13, EG546903, LOC100042008, 4930597O21Rik, Gng12, LOC100042837, Gadd45a, E230016M11Rik, EG667310, LOC667318, Serbp1
Downstream geneIl12rb2, LOC667324, EG667326, LOC672137, EG209589, LOC100042890, Il23r, Tacstd2, Igk, Igkv2-137, 4930515G16Rik, Igkv1-136, Igkv1-135, LOC723992, EG628006, Igkv14-134-1, Igkv17-134, EG628027, LOC384401, EG628042, EG243423, EG628056, EG628072, Igkv9-129, Igkv9-128, EG243433, Igkv14-126-1, LOC723993, EG628127, ENSMUSG00000050218, EG243431, EG628144, Igkv1-122, EG667435, EG434025, Igkv9-119, Igkv14-118-2, Igkv14-118-1, EG384405, Igkv11-118, Igkv1-117, EG434026, EG628206, Igkv11-114, Igkv2-113, LOC232047, EG381776, Igkv14-111, Igkv1-110
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319K16.bB6Ng01-319K16.g
ACCGA109239GA109240
length1,0961,006
definitionB6Ng01-319K16.b B6Ng01-319K16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagaatttctggtagtttcaacttgattttatataccttttaag
tatattccttatgtattcatggtttacttgggtgctaacatctaacataa
agttagaaaacttttgttgtgtgggagacctgtgtgtccgcatgggggat
ggaatggtgaatccatattcttagcagctaggtaagaatgtatgtgcctc
acactttcaaaagaaagtgagacttggtcactatattttaaaaaaaatct
agattaaattttttattagtagtgataagcctagcctccatgtatctcat
aaagaatctagattaactttctattaatagtgataggccttagtgaaagg
gttgattaagtctggtatttaagtaaataatgaccaggggttttgttcct
tatatttagttttggagatagttattaaaaatagagttccagtatgtttc
ttactggctgagaacttttgttatatagaccacaactaggctagcctcta
gctcatgagtgctgggattaaaagtaggagccactgcactagacttttta
tagtgtttttaaactagtgaaaatattcttgagtttcaaggtttttgaga
agttaatgagaatcactctaccctttttctgaaaacatacccactaagta
tactgtataatgaagatagaactttcaattacttattcatggcacaaaat
taagacattaatttgggtagaattacgaggtgaaagtttattctcacata
gtgtttaacaggcactgctaggcttggtggtacttgaggttgaatttaaa
gggttataatctgaagtcttgttaaatagcatcatcctatcttaaaacca
gatctctgcacattgaaagatatatcagtgaaatgtaggtctttcgtgaa
tttagcacacttgtctgggaagggagcataatttggggaattgcttatat
tagattggcctgtacccatttctgtgtgataatttcttggtttatgatga
tgtgagagctcaacttgcagagtgccacctcccagggtttggatttattt
tcttctaaaaagcaagttaaccaatccacagaaccagcatgtcttt
gaattccatgacaaaaccaaattcacacaatatctttccatgaatccagc
ccttcagaggataataacggggaaacaccaacacaaagacggaaactaca
cccaagaaagtaatccttcaacaaacctaaaagaacacaaccacaggaat
agaatcccaactctaacaacaaaaataacaggaagaaacaattccttttc
cttaatatctcttaatatcaatggactcaattcccaaataaaaagacata
gactaacaaactggctacataaacaggacccaaatgtttgctgcttacag
gaaacccacctcagggaaaaagagacactacctcagggtaaaaggctgga
aaacaattttccaagcaaatggtccaaagaaacaaggtagagtagtcatt
ctaatatcgaataaaatcgactttcaacccaaagttatcaaaaaagacaa
ggaggggcacttcaaactcatcaaagatcaaaccttccaagatgaactct
cagttccgaatatctatgctccaaatgcaagggcagccacattcattaaa
gaaactgtagtaaagctcaaagcacataatgcacctcacacaaaaatagt
gggagacttcaacaccccactctcatcaatggaaagatcatggaaaaaga
aaatagagacacattgaaactaacagaagttatgaaagaaatggatttaa
cagatatctacagaacattttattctaaaacaaaaggatataccttcttc
tcagcacctcatggcaccttctccaaaatcgaccataaaattggttgcaa
aacagacctcaacagatacaaaaatattgaaattaccccatgcatcctat
caaatcaccacaaactaaggctagtcttcaataacaacaaaaataataga
aagcaaacatccacatggaagctaaagaacactctactcaatgatacctt
ggtcatggaagaaaataatgaaagaaattaaagactttttagagtttaat
gaaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_67237838_67238935
seq2: B6Ng01-319K16.b_45_1140

seq1  GAATTCCAGAATTTCTGGTAGTTTCAACTTGATTTTATATACCTTTTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAATTTCTGGTAGTTTCAACTTGATTTTATATACCTTTTAAG  50

seq1  TATATTCCTTATGTATTCATGGTTTACTTGGGTGCTAACATCTAACATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCCTTATGTATTCATGGTTTACTTGGGTGCTAACATCTAACATAA  100

seq1  AGTTAGAAAACTTTTGTTGTGTGGGAGACCTGTGTGTCCGCATGGGGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGAAAACTTTTGTTGTGTGGGAGACCTGTGTGTCCGCATGGGGGAT  150

seq1  GGAATGGTGAATCCATATTCTTAGCAGCTAGGTAAGAATGTATGTGCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGGTGAATCCATATTCTTAGCAGCTAGGTAAGAATGTATGTGCCTC  200

seq1  ACACTTTCAAAAGAAAGTGAGACTTGGTCACTATATTTTAAAAAAAATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTTCAAAAGAAAGTGAGACTTGGTCACTATATTTTAAAAAAAATCT  250

seq1  AGATTAAATTTTTTATTAGTAGTGATAAGCCTAGCCTCCATGTATCTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAAATTTTTTATTAGTAGTGATAAGCCTAGCCTCCATGTATCTCAT  300

seq1  AAAGAATCTAGATTAACTTTCTATTAATAGTGATAGGCCTTAGTGAAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATCTAGATTAACTTTCTATTAATAGTGATAGGCCTTAGTGAAAGG  350

seq1  GTTGATTAAGTCTGGTATTTAAGTAAATAATGACCAGGGGTTTTGTTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATTAAGTCTGGTATTTAAGTAAATAATGACCAGGGGTTTTGTTCCT  400

seq1  TATATTTAGTTTTGGAGATAGTTATTAAAAATAGAGTTCCAGTATGTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTAGTTTTGGAGATAGTTATTAAAAATAGAGTTCCAGTATGTTTC  450

seq1  TTACTGGCTGAGAACTTTTGTTATATAGACCACAACTAGGCTAGCCTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGGCTGAGAACTTTTGTTATATAGACCACAACTAGGCTAGCCTCTA  500

seq1  GCTCATGAGTGCTGGGATTAAAAGTAGGAGCCACTGCACTAGACTTTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATGAGTGCTGGGATTAAAAGTAGGAGCCACTGCACTAGACTTTTTA  550

seq1  TAGTGTTTTTAAACTAGTGAAAATATTCTTGAGTTTCAAGGTTTTTGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTTTTTAAACTAGTGAAAATATTCTTGAGTTTCAAGGTTTTTGAGA  600

seq1  AGTTAATGAGAATCACTCTACCCTTTTTCTGAAAACATACCCACTAAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAATGAGAATCACTCTACCCTTTTTCTGAAAACATACCCACTAAGTA  650

seq1  TACTGTATAATGAAGATAGAACTTTCAATTACTTATTCATGGCACAAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTATAATGAAGATAGAACTTTCAATTACTTATTCATGGCACAAAAT  700

seq1  TAAGACATTAATTTGGGTAGAATTACGAGGTGAAAGTTTATTCTCACATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACATTAATTTGGGTAGAATTACGAGGTGAAAGTTTATTCTCACATA  750

seq1  GTGTTTAACAGGCACTGCTAGGCTTGGTGGTACTTGAGGTTGAATTT-AA  799
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GTGTTTAACAGGCACTGCTAGGCTTGGTGGTACTTGAGGTTGAATTTAAA  800

seq1  GGGTTATAATCTGAAGTCTTGTTAAATAGCATCATCCTATCTTAAAACCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTATAATCTGAAGTCTTGTTAAATAGCATCATCCTATCTTAAAACCA  850

seq1  GATCTCTGCACATTGAAAGATATATCAGTGAAATGTAGGTCTTTCGTGAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCTGCACATTGAAAGATATATCAGTGAAATGTAGGTCTTTCGTGAA  900

seq1  TTTAGCACACTTGTCTGGGAAGGGAGCATAA-TTGGGGAATTGCTTATAT  948
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTTAGCACACTTGTCTGGGAAGGGAGCATAATTTGGGGAATTGCTTATAT  950

seq1  TAGATTGGCCTGTACCCATTTCTGTTGTGATAATTTCTTGGTTTATGATT  998
      |||||||||||||||||||||||| ||||||||||||||||||||||| |
seq2  TAGATTGGCCTGTACCCATTTCTG-TGTGATAATTTCTTGGTTTATGA-T  998

seq1  GATGTGAGAAGGCCCAACTTGCAGAGGTGCCA-CTCCCAGGGGTTTGAAT  1047
      |||||||||  || ||||||||||| |||||| |||||| ||||||| ||
seq2  GATGTGAGA--GCTCAACTTGCAGA-GTGCCACCTCCCA-GGGTTTGGAT  1044

seq1  TTA-TTTCTTCTAAAAAGCAAGGTAAACAAACCACAGAA-CAGCATGGTC  1095
      ||| |||||||||||||||||| ||| ||| |||||||| |||||| |||
seq2  TTATTTTCTTCTAAAAAGCAAGTTAACCAATCCACAGAACCAGCAT-GTC  1093

seq1  TTT  1098
      |||
seq2  TTT  1096