BAC Information

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BAC

Clone NameB6Ng01-320P01
Chromosome6 (Build37)
Map Location 79,028,526 - 79,029,724
singlet/doubletsinglet
Overlap genenone
Upstream geneEG434050, Pap, Reg3d, Reg3a, Reg2, Reg1, Reg3g, LOC621716, Ppia-ps6_789.1, LOC384440
Downstream geneLOC621815, LOC100043392, Lrrtm4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320P01.bB6Ng01-320P01.g
ACCGA110180GA110181
length1,184715
definitionB6Ng01-320P01.b B6Ng01-320P01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatgaaaatatcaatgaattaatagtgtggtgagtccccagatt
gtaagaagcattggtccaacctgagcttctgtagaaaattatggtttcaa
aattaatcactgcaggaaatcctaatgaatgcagcattggcatatgatgg
ccatttctttctatcctaaagtaacttttttcactgtatcacttcaacaa
agcatgttatctatctgcttctagtaagttgatctccattaaaaaaaaaa
atcacctcttttcttaacttagtatctttcttgtctgaccacatataggt
taaaggaatgtgttggatccttttttgtctctctccactcgaaactgtgt
cttgaccagaagatcaaactttgtttttaagttgatcctataccttccca
agtttctgatgtgtctatttcaaagcctggggttctctttttgttcccac
actaagctatggatatttttttccactttcttactgtgatttccttccat
ctcaaccaagcagcatatttagttctttgagataaggtattttaagaaca
tgtcttcagcttccttccaggaaagctttggcattaatttaaaaaataaa
tatcaacacaaaaatgtgtatattgtgcatattttagactagttttgtat
gcttcatttactaagcatatctcttctctaaaaccctattttgaaaccat
atcttaggctataaatatacatgaccctatggaatacttagtgtttctgt
gtgtctcactttttatttgtttttcaaagatttacatttgatttatgtgt
aggagacttttgcctgcaagtttgtctgcacactatgtgtgtgcagaaga
gaggggaactagttccagagagctgtatgggtattaccctatgtgggtaa
tgtgttaccctatgtgggtaatgtgactccacccaggcacactgagaaaa
caacagtactcttaaggacatacatctctcagtcgtgcattctcattttt
ttttttactagatattcttcttttatttacacttcaatcttattccaaag
gtttctatcctccgcagctctgcttcccttacccacccacttccatttct
tgctagcattaccctatactggggcattataaaggttggcaatatacaag
gactcttcatgatgcctgttagttaatgttgttc

gaattcatgaaattcttaagcacatggatagaactagaaaatttcatcct
aactgaggtaacacaatcacaaaagaaagtgcatcgtatgcgctcactga
taagtggctagtagcccaaaagccacaaataaccaggatacaattcatag
accacatgaagcctaaaaagtaggaagaccaaagtgtggctgctttggtc
cttcttagaaggagaacacaatactcacaggagcaaatatgaaaataaag
tgtagatcagagactaaaggaaacaccacccagagactgtcccacctggg
gattcatcccatatacagttaccaaacccagacactattgtggatgccaa
gaagtgcatgttgaaaggagcctgatatggctgtctcctgagaggccctg
ccagaaccttacaaatacagagaaggatgttagcagccaacaattggact
gagcatggggtccctactagagatgttagagaagagactgaaggagttga
aggggtttgcagccccataggaagaacaacaatattaaccaatgagaacc
cgcagaactcccagtgacaaagccattaacaaaggagtacacattgctac
agatgcatatgtagcagaggatggccttgtcatgcatcaatgggaggaga
ggtccttgttcctatgaaggctcaatcgatgcccaagtgtaggggaatag
aggatggggaggtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_79028526_79029724
seq2: B6Ng01-320P01.b_47_1230 (reverse)

seq1  GAACAACAATATGAACTAACAGCCATCATTGGGAAGAGAGGCTCCTTG-G  49
      |||||||   || ||||||||| ||||||   ||||||    ||||||  
seq2  GAACAAC---ATTAACTAACAGGCATCAT---GAAGAG----TCCTTGTA  40

seq1  TATTG-CAAACTTTAT-ATGCCCCAGTATAGGGTAATGCTAGGGCCAAGA  97
      ||||| ||| |||||| |||||||||||||||||||||||||   |||||
seq2  TATTGCCAACCTTTATAATGCCCCAGTATAGGGTAATGCTAG---CAAGA  87

seq1  AATGGGAGTGGGTGGGT-AGGGGAGCAGAGCTGCGGGAGGGGATAGGAAA  146
      ||||| ||||||||||| |||| ||||||||||||   | ||||| ||||
seq2  AATGGAAGTGGGTGGGTAAGGGAAGCAGAGCTGCG---GAGGATA-GAAA  133

seq1  CTTTTGGGATAAGATTTGAAGTGTAAATAAA--GAGAATATCTAGT-AAA  193
      | ||||| |||||| ||||||||||||||||   |||||||||||| |||
seq2  CCTTTGGAATAAGA-TTGAAGTGTAAATAAAAGAAGAATATCTAGTAAAA  182

seq1  AAAAAAATGAGAATTGGCACGACTGAGAGATGTATGTCCTTAAGAGTACT  243
      ||||||||||||||  ||||||||||||||||||||||||||||||||| 
seq2  AAAAAAATGAGAAT--GCACGACTGAGAGATGTATGTCCTTAAGAGTAC-  229

seq1  TGTTGTTTTCTCAGTGTGCCTGGGTTGGAGTCACATTACCCACATAGGGT  293
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGTTGTTTTCTCAGTGTGCCTGGG-TGGAGTCACATTACCCACATAGGGT  278

seq1  AACACATTACCCACATAGGGTAATACCCATACAGCTCTCTGGAACTAGTT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATTACCCACATAGGGTAATACCCATACAGCTCTCTGGAACTAGTT  328

seq1  CCCCTCTCTTCTGCACACACATAGTGTGCAGACAAACTTGCAGGCAAAAG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCTCTTCTGCACACACATAGTGTGCAGACAAACTTGCAGGCAAAAG  378

seq1  TCTCCTACACATAAATCAAATGTAAATCTTTGAAAAACAAATAAAAAGTG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTACACATAAATCAAATGTAAATCTTTGAAAAACAAATAAAAAGTG  428

seq1  AGACACACAGAAACACTAAGTATTCCATAGGGTCATGTATATTTATAGCC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACACAGAAACACTAAGTATTCCATAGGGTCATGTATATTTATAGCC  478

seq1  TAAGATATGGTTTCAAAATAGGGTTTTAGAGAAGAGATATGCTTAGTAAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATATGGTTTCAAAATAGGGTTTTAGAGAAGAGATATGCTTAGTAAA  528

seq1  TGAAGCATACAAAACTAGTCTAAAATATGCACAATATACACATTTTTGTG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCATACAAAACTAGTCTAAAATATGCACAATATACACATTTTTGTG  578

seq1  TTGATATTTATTTTTTAAATTAATGCCAAAGCTTTCCTGGAAGGAAGCTG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATATTTATTTTTTAAATTAATGCCAAAGCTTTCCTGGAAGGAAGCTG  628

seq1  AAGACATGTTCTTAAAATACCTTATCTCAAAGAACTAAATATGCTGCTTG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATGTTCTTAAAATACCTTATCTCAAAGAACTAAATATGCTGCTTG  678

seq1  GTTGAGATGGAAGGAAATCACAGTAAGAAAGTGGAAAAAAATATCCATAG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGATGGAAGGAAATCACAGTAAGAAAGTGGAAAAAAATATCCATAG  728

seq1  CTTAGTGTGGGAACAAAAAGAGAACCCCAGGCTTTGAAATAGACACATCA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTGTGGGAACAAAAAGAGAACCCCAGGCTTTGAAATAGACACATCA  778

seq1  GAAACTTGGGAAGGTATAGGATCAACTTAAAAACAAAGTTTGATCTTCTG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTGGGAAGGTATAGGATCAACTTAAAAACAAAGTTTGATCTTCTG  828

seq1  GTCAAGACACAGTTTCGAGTGGAGAGAGACAAAAAAGGATCCAACACATT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGACACAGTTTCGAGTGGAGAGAGACAAAAAAGGATCCAACACATT  878

seq1  CCTTTAACCTATATGTGGTCAGACAAGAAAGATACTAAGTTAAGAAAAGA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAACCTATATGTGGTCAGACAAGAAAGATACTAAGTTAAGAAAAGA  928

seq1  GGTGATTTTTTTTTTTAATGGAGATCAACTTACTAGAAGCAGATAGATAA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATTTTTTTTTTTAATGGAGATCAACTTACTAGAAGCAGATAGATAA  978

seq1  CATGCTTTGTTGAAGTGATACAGTGAAAAAAGTTACTTTAGGATAGAAAG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTTGTTGAAGTGATACAGTGAAAAAAGTTACTTTAGGATAGAAAG  1028

seq1  AAATGGCCATCATATGCCAATGCTGCATTCATTAGGATTTCCTGCAGTGA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGCCATCATATGCCAATGCTGCATTCATTAGGATTTCCTGCAGTGA  1078

seq1  TTAATTTTGAAACCATAATTTTCTACAGAAGCTCAGGTTGGACCAATGCT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTGAAACCATAATTTTCTACAGAAGCTCAGGTTGGACCAATGCT  1128

seq1  TCTTACAATCTGGGGACTCACCACACTATTAATTCATTGATATTTTCATT  1193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACAATCTGGGGACTCACCACACTATTAATTCATTGATATTTTCATT  1178

seq1  GAATTC  1199
      ||||||
seq2  GAATTC  1184


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