BAC Information

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BAC

Clone NameB6Ng01-321D05
Chromosome6 (Build37)
Map Location 54,305,823 - 54,438,644
singlet/doubletdoublet
Overlap geneWipf3
Upstream geneCreb5, LOC384386, 1200009O22Rik, Cpvl, LOC666305, Chn2, LOC100042056, Prr15, EG640926
Downstream geneScrn1, Fkbp14, Plekha8, LOC100041292, 2410066E13Rik, Znrf2, Nod1, A030007L17Rik, Gars, Crhr2, Inmt, C330043M08Rik, Aqp1, Ghrhr, Adcyap1r1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321D05.bB6Ng01-321D05.g
ACCGA110373GA110374
length91122
definitionB6Ng01-321D05.b B6Ng01-321D05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(54,438,553 - 54,438,644)(54,305,823 - 54,305,944)
sequence
ctaaaggagggctttggggggggggggagacaggacagctttgtctgagc
ccggtgtgaaccgtgggtttcctatgtaaatgggtctgccc
taggtgctgctggacatgacctagctaccaagctacatgatctagggagg
agaataaatgggggagaacagggctacgtgggccaggcacgaagacccag
ggtgggaggagggaggtggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_54438553_54438644
seq2: B6Ng01-321D05.b_48_138 (reverse)

seq1  GGGCAGAACCCATTTGCTTTGGGAAGCCCAGGGTTCACACTGGGCACAG-  49
      |||||| |||||||| |  | |||| |||| ||||||||| |||| ||| 
seq2  GGGCAG-ACCCATTTAC-ATAGGAAACCCACGGTTCACACCGGGCTCAGA  48

seq1  CCAAGCTGTCCTGTCTCCCCCCCCCCCCAAAGCCCTCCTTTAG  92
      | |||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCTGTCCTGTCTCCCCCCCCCCCCAAAGCCCTCCTTTAG  91

seq1: chr6_54305823_54305944
seq2: B6Ng01-321D05.g_72_193

seq1  TAGGTGCTGCTGGACATGACCTAGCTACCAAGCTACATGATCTAGGGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGCTGCTGGACATGACCTAGCTACCAAGCTACATGATCTAGGGAGG  50

seq1  AGAATAAATGGGGGAGAACAGGGCTACGTGGGCCAGGCACGAAGACCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAAATGGGGGAGAACAGGGCTACGTGGGCCAGGCACGAAGACCCAG  100

seq1  GGTGGGAGGAGGGAGGTGGGGG  122
      ||||||||||||||||||||||
seq2  GGTGGGAGGAGGGAGGTGGGGG  122