BAC Information

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BAC

Clone NameB6Ng01-321H17
Chromosome6 (Build37)
Map Location 73,936,097 - 73,937,280
singlet/doubletsinglet
Overlap genenone
Upstream geneDnahc6, Suclg1, Olfr210-ps1, 4931417E11Rik, LOC100043338
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321H17.bB6Ng01-321H17.g
ACCGA110575GA110576
length1,1961,174
definitionB6Ng01-321H17.b B6Ng01-321H17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctacaactccagcatatccaacatcttggggtctccaagaagtcg
ccttcacagcttcatataatggcctctataggcctccattcaaagatagt
gatgacacacacctggcctcaatggtttttctttgccatgaggggaaatt
tcacaaccatgctttttctagtcttttctaataaatccagaagaacatgg
ctaaatctgccaagttctttttgctgaggctagatagattacactccttc
aacgcccttcaataatgtcttcattggctttctgttattatggtttcctt
aactatctaaccttggctgaccttgaacttcatctgtaggttgggctgga
ctcaaactcagaggtccccctgcctctgtcacctacatcttggattaaag
atatgtactaattaatgggctctaaacttttctataatgcctttttaaga
gttggaagcttagctgcttggagtcttgttctgaggtcaactttccattt
agcacatttagcatcacatttttctttaaacattttatcgccttgatcac
tagacttgactccattacacttcgtggtattctttttctcctaaaacagt
acattttgtatttgccttgctcagcttggtcttgttcactatggatttgc
ataatagatatgcataagagtgagcatgactaactacatattatattcaa
tactaggctgatttgaaatctcctccaccaaggttcttaaaactcttcaa
tttaccctcgggcagattttctggacaagagcagaaagcagccacattct
tcacctaaacattataagaaaaatctctaagccacatattaatattaata
ttctgctcctctgaaatcactttagccagaccatcataatctacactctt
tgcaccgctgtcttccctgttcctaccagtatggcctattaaaccacact
taaatgccaaatgctttcctaaaacaaatcccaagttcacattctgttaa
aagaaatgtgatcagacctatcacagcatactagtgctgataacactctg
tcttagattctattgctataaaacatatcatgacatgccactctatgaga
aacattacctggcctagcctacaggagcagagttaagtcatatctatgca
tgagcatggcacactccttgcgaaactgtatgtcttatgggacgac

gaattctcatgttcttatcattattcttcgttattcattgtaaatacaat
tgatgacttattggtcaaaagaaaatgtataatgttttgttttcctagta
gatataggtccagatccatatggcatttttgttgatggctctaaaaattt
agtagttagtataaaacacataaattaacataaaggtaatatactgattt
caatgtataaagaacaataattaaatgggtgtgtgtgtgcttagtaagta
tctctcaactttgaaatttttggaatcacattagcatcccatttccttca
gtatgctgatcttcacacagcatgtgttttctttttctttttcttttcct
ttaaattatagtgtttctgtgtgcactattgtctttgagtatgtacaagc
cagatgttcaagtcttgagagtttttctagatcaatattttttcagattt
actttattttatttgtatgagtgttttgcctgtatgtatttatgtgtggc
atgtgtatgcttggtatccagggagatcagtataggatgtcagatctttg
gaaactagatttgtatataattgtgtactgctaagtggtttctgggaact
aaatcctggtcccctgcaagaacaatcagtgttcttaactactgagccat
ctctatagccctatcttatcttttgaaatagcatttctcaatgaaaatgg
agctcacttctttgactaggaagatttgctagcaaaccattgggatactc
ctgtcatttctcctgtaagctccaacacttactgagccaagcttacctga
tatggttgataaaaatgaatttttattaggccaggatgaaatggtgtcag
caagactgaggctgaaatcagtttatccaagtaacagactctttctatcc
ttattagaagtggaatatagcagtggctgccagaatcaaaacaggagtag
tttccaggatacaatgatattttcaagctttacagggtacacagattaat
gtctaagaccagttgtctatcaagctaccatatgctttactgacgtccag
ggaaacagaaatccacaagcaacctgaaatgtttcactacctgaagggat
gcctcaatttcttaggaactgaaggcaccaagtactcagaccatgggtct
ctacccttgacctacaatctctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_73936097_73937280
seq2: B6Ng01-321H17.g_65_1238

seq1  GAATTCTCATGTTCTTATCATTATTCTTCGTTATTCATTGTAAATACAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATGTTCTTATCATTATTCTTCGTTATTCATTGTAAATACAAT  50

seq1  TGATGACTTATTGGTCAAAAGAAAATGTATAATGTTTTGTTTTCCTAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGACTTATTGGTCAAAAGAAAATGTATAATGTTTTGTTTTCCTAGTA  100

seq1  GATATAGGTCCAGATCCATATGGCATTTTTGTTGATGGCTCTAAAAATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAGGTCCAGATCCATATGGCATTTTTGTTGATGGCTCTAAAAATTT  150

seq1  AGTAGTTAGTATAAAACACATAAATTAACATAAAGGTAATATACTGATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTTAGTATAAAACACATAAATTAACATAAAGGTAATATACTGATTT  200

seq1  CAATGTATAAAGAACAATAATTAAATGGGTGTGTGTGTGCTTAGTAAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTATAAAGAACAATAATTAAATGGGTGTGTGTGTGCTTAGTAAGTA  250

seq1  TCTCTCAACTTTGAAATTTTTGGAATCACATTAGCATCCCATTTCCTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCAACTTTGAAATTTTTGGAATCACATTAGCATCCCATTTCCTTCA  300

seq1  GTATGCTGATCTTCACACAGCATGTGTTTTCTTTTTCTTTTTCTTTTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCTGATCTTCACACAGCATGTGTTTTCTTTTTCTTTTTCTTTTCCT  350

seq1  TTAAATTATAGTGTTTCTGTGTGCACTATTGTCTTTGAGTATGTACAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTATAGTGTTTCTGTGTGCACTATTGTCTTTGAGTATGTACAAGC  400

seq1  CAGATGTTCAAGTCTTGAGAGTTTTTCTAGATCAATATTTTTTCAGATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGTTCAAGTCTTGAGAGTTTTTCTAGATCAATATTTTTTCAGATTT  450

seq1  ACTTTATTTTATTTGTATGAGTGTTTTGCCTGTATGTATTTATGTGTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATTTTATTTGTATGAGTGTTTTGCCTGTATGTATTTATGTGTGGC  500

seq1  ATGTGTATGCTTGGTATCCAGGGAGATCAGTATAGGATGTCAGATCTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTATGCTTGGTATCCAGGGAGATCAGTATAGGATGTCAGATCTTTG  550

seq1  GAAACTAGATTTGTATATAATTGTGTACTGCTAAGTGGTTTCTGGGAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTAGATTTGTATATAATTGTGTACTGCTAAGTGGTTTCTGGGAACT  600

seq1  AAATCCTGGTCCCCTGCAAGAACAATCAGTGTTCTTAACTACTGAGCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTGGTCCCCTGCAAGAACAATCAGTGTTCTTAACTACTGAGCCAT  650

seq1  CTCTATAGCCCTATCTTATCTTTTGAAATAGCATTTCTCAATGAAAATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATAGCCCTATCTTATCTTTTGAAATAGCATTTCTCAATGAAAATGG  700

seq1  AGCTCACTTCTTTGACTAGGAAGATTTGCTAGCAAACCATTGGGATACTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCACTTCTTTGACTAGGAAGATTTGCTAGCAAACCATTGGGATACTC  750

seq1  CTGTCATTTCTCCTGTAAGCTCCAACACTTACTGAGCCAAGCTTACCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCATTTCTCCTGTAAGCTCCAACACTTACTGAGCCAAGCTTACCTGA  800

seq1  TATGGTTGATAAAAATGAATTTTTATTAGGCCAGGATGAAATGGTGTCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTTGATAAAAATGAATTTTTATTAGGCCAGGATGAAATGGTGTCAG  850

seq1  CAAGACTGAGGCTGAAATCAGTTTATCCAAGTAACAGACTCTTTCTATCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACTGAGGCTGAAATCAGTTTATCCAAGTAACAGACTCTTTCTATCC  900

seq1  TTATTAGAAGTGGAATATAGCAGTGGCTGCCAGAATCAAAACAGGAGTAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGAAGTGGAATATAGCAGTGGCTGCCAGAATCAAAACAGGAGTAG  950

seq1  TTTCCAGGATACAATGATATTTTCAAGCTTTACAGGGTACACAAGATTAA  1000
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTTCCAGGATACAATGATATTTTCAAGCTTTACAGGGTACAC-AGATTAA  999

seq1  TGTCTAAGACCAGTTGTCCTATCAAGCTACCATATGCTTTACTGACGTCC  1050
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TGTCTAAGACCAGTTGT-CTATCAAGCTACCATATGCTTTACTGACGTCC  1048

seq1  A-GGAAACAGAAAATCACAAGGCAACCTG-AATGTTTCACTACCTGAGGG  1098
      | |||||||||||  ||||| |||||||| ||||||||||||||||| ||
seq2  AGGGAAACAGAAATCCACAA-GCAACCTGAAATGTTTCACTACCTGAAGG  1097

seq1  AATGCCTCAATTTCTCAGGAACTGAAAGGCACACAGTACCTCAGGAACCA  1148
       |||||||||||||| |||||||| |||||||  |||| |||||  ||||
seq2  GATGCCTCAATTTCTTAGGAACTG-AAGGCACCAAGTA-CTCAG--ACCA  1143

seq1  T-GGTCTCTACCCTGGAAAACCTACACAATCCTCTCA  1184
      | |||||||||||| |   ||||  ||||| ||||||
seq2  TGGGTCTCTACCCTTG---ACCT--ACAAT-CTCTCA  1174


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