BAC Information

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BAC

Clone NameB6Ng01-322A08
Chromosome6 (Build37)
Map Location 26,335,663 - 26,336,718
singlet/doubletsinglet
Overlap genenone
Upstream geneGpr37, Pot1a, EG626912, LOC100041210
Downstream geneLOC100041247, Grm8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322A08.bB6Ng01-322A08.g
ACCGA110976GA110977
length1,0391,203
definitionB6Ng01-322A08.b B6Ng01-322A08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaagacatagaactacagctcattcacactgaaagggttataat
aatcaatacatagtcacagaatatctatctatctatctatctatctatct
atctatctatctatctatctatgtatctatctatctatctatctatctat
ctatctatctatctatctatatctttatgtggatacatgagagttttaca
gtaccatctaatctaatcttcacttgaatgtcacaaatccattcctagag
aaaatggcacctgaaataaattgagtctttctacatccatcatcattata
tgtgctttaattattaagtagtccattgtgttggggtgctgtgacaggac
agaaaatataattaactgttttgactctccagcaacagattttggaggtc
ttcattttacgcctaggtagaactagtgatgatgtatttgtgaatatttt
tgatgttctttgagaaagtataacaaataactttcaaataataaacaagg
ccatttaatttaatatcactgaaatatatagagaaatattttcaaaaata
ttagtttacaaaccaaattggtgatattagctttaattgttatcttaacc
caacctagaatcacctaaacatagatcaccctgggagactgtcaatacta
gactgggctcttggcatttctgtatgggattgtcttaattaacttaaatg
gcatgggaagacaccttctagtatgatttgtggcacgccctatgcatggt
tgtcctgaactacattctaaaatattgggctgagcacaagtaaagagtaa
gcctgaatatactcctttctctttctactcctgacttgtgaaacaacagc
tatatcacactctgctactatgatgtccctgtaatgatggacactaacct
ggaattgaagtgaaataccctttatttctcagttgcttttgtctgacagt
tatacagcatagaatgaaacagacactagtcatctatcttttctctgact
gaagatgcagacattattgtgcatctcatcgacatttgc
gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaatg
ctcagcatctttagtcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacactaatcagaatggctaaaataaaaaattcaggtgacagc
agatgctggcaaggaagtagagaaagaggaacactccttcattgttggtg
ggattgcaagcttgtataaccactctggaaatcagtctggcggttcctca
gaatgttagacatagtactactggaggatcctgcaatacctctcctgggt
acatatccagaagatgtcccaaccggtaagaaggacacatgctctactat
gttcatatcagccttatttataatagccagaagctggaaagaacccagat
ggccctcaacagaggaatggatacaaaaaatgtggtttatttacacaatg
gagtactactcagctattaaaatgaatgaatttatgaaattcctaggcaa
atgtttggacttagagggcatcatcatgagtgaagtaacacaatcacaaa
agaactcaaatgatatgtactcactgataaatggatattagcccagaaac
ttagtatacccgagatacaagagacaatttgtaaaacacatgaaactgaa
gaagaacagagaccaaagtgtgaacactttgcctcttcttagaattggaa
acaatcacccattgaaggagttacagagacaaagtttgtagctgagacaa
aagaatggaccatgtagagactgccatatccagggatccatcccataatt
agcctccaaacgatgacaccattgcatacactagcaagtgtttgctgaaa
ggaccctgatatagctgtctctcgtgaggctaggctggggcctagcaaac
acagaagtggatgctcacagtcagctattggatgggtcacagggccccaa
tgtagagctagagaaagtatccaaggagctaagagatcctcaccctgtag
gtgcaacacattatgactaaccagtacccagtgcctcctcgactctagct
gcatattgtattcaaaaagattgccctagtagcatcacggtaaagagagg
ccattgggaacacgccaacactttattgccttaatacagggatgcagcaa
agttggatagtgtgtgtatagagcgtatagtggcgaacattctcttggtg
act
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_26335663_26336718
seq2: B6Ng01-322A08.b_43_1081

seq1  GAATTCAAAGACATAGAACTACAGCTCATTCACACTGAAAGGGTTATAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGACATAGAACTACAGCTCATTCACACTGAAAGGGTTATAAT  50

seq1  AATCAATACATAGTCACAGAA----TATCTATCTATCTATCTATCTATCT  96
      |||||||||||||||||||||    |||||||||||||||||||||||||
seq2  AATCAATACATAGTCACAGAATATCTATCTATCTATCTATCTATCTATCT  100

seq1  ATCTATCTATCTATCTATCTATGTATCTATCTATCTATCTATCTATCTAT  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATCTATCTATCTATCTATGTATCTATCTATCTATCTATCTATCTAT  150

seq1  CTATCTATCTATCTATCTATATCTTTATGTGGATACATGAGAGTTTTACA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTATCTATCTATCTATATCTTTATGTGGATACATGAGAGTTTTACA  200

seq1  GTACCATCTAATCTAATCTTCACTTGAATGTCACAAATCCATTCCTAGAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCATCTAATCTAATCTTCACTTGAATGTCACAAATCCATTCCTAGAG  250

seq1  AAAATGGCACCTGAAATAAATTGAGTCTTTCTACATCCATCATCATTATA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGCACCTGAAATAAATTGAGTCTTTCTACATCCATCATCATTATA  300

seq1  TGTGCTTTAATTATTAAGTAGTCCATTGTGTTGGGGTGCTGTGACAGGAC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTTAATTATTAAGTAGTCCATTGTGTTGGGGTGCTGTGACAGGAC  350

seq1  AGAAAATATAATTAACTGTTTTGACTCTCCAGCAACAGATTTTGGAGGTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATATAATTAACTGTTTTGACTCTCCAGCAACAGATTTTGGAGGTC  400

seq1  TTCATTTTACGCCTAGGTAGAACTAGTGATGATGTATTTGTGAATATTTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTTACGCCTAGGTAGAACTAGTGATGATGTATTTGTGAATATTTT  450

seq1  TGATGTTCTTTGAGAAAGTATAACAAATAACTTTCAAATAATAAACAAGG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTTCTTTGAGAAAGTATAACAAATAACTTTCAAATAATAAACAAGG  500

seq1  CCATTTAATTTAATATCACTGAAATATATAGAGAAATATTTTCAAAAATA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTAATTTAATATCACTGAAATATATAGAGAAATATTTTCAAAAATA  550

seq1  TTAGTTTACAAACCAAATTGGTGATATTAGCTTTAATTGTTATCTTAACC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTACAAACCAAATTGGTGATATTAGCTTTAATTGTTATCTTAACC  600

seq1  CAACCTAGAATCACCTAAACATAGATCACCCTGGGAGACTGTCAATACTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTAGAATCACCTAAACATAGATCACCCTGGGAGACTGTCAATACTA  650

seq1  GACTGGGCTCTTGGCATTTCTGTATGGGATTGTCTTAATTAACTTAAATG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGGCTCTTGGCATTTCTGTATGGGATTGTCTTAATTAACTTAAATG  700

seq1  GCATGGGAAGACACCTTCTAGTATGATTTGTGGCACGCCCTAGGCATGGT  746
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GCATGGGAAGACACCTTCTAGTATGATTTGTGGCACGCCCTATGCATGGT  750

seq1  TGTCCTGAACTACATTCTAAAATATTGGGCTGAGCACAAGTAAAGAGTAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGAACTACATTCTAAAATATTGGGCTGAGCACAAGTAAAGAGTAA  800

seq1  GCCTGAATATACTCCTTTCTCTTTCTACTCCTGACTTGTGAAACAAACAG  846
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GCCTGAATATACTCCTTTCTCTTTCTACTCCTGACTTGTGAAAC-AACAG  849

seq1  CTATATCACACTCTGCTACTATGATGTCCCTGTAATGATGGACACTAACC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATCACACTCTGCTACTATGATGTCCCTGTAATGATGGACACTAACC  899

seq1  TGGAATTGGAAGTTGAAATAACCCTTTTATTTCCTCAGTTGCTTTTTGTC  946
      ||||||| |||| |||||||  || ||||||| ||||||||| |||||||
seq2  TGGAATT-GAAG-TGAAATA--CCCTTTATTT-CTCAGTTGC-TTTTGTC  943

seq1  TGGACAGTTTATTACAGCCATAGAAATGAAACAGACACTAGGCCATTCTA  996
      | |||||||   ||||| ||||| ||||||||||||||||| |   ||| 
seq2  T-GACAGTT--ATACAG-CATAG-AATGAAACAGACACTAGTC--ATCT-  985

seq1  ATCTTTTCTTCTGACTTGAGAGATTGCAGACATTTATTTGTGCATCTCAT  1046
      |||||||| |||||||  |||   ||||||||||   |||||||||||||
seq2  ATCTTTTC-TCTGACTGAAGA---TGCAGACATT--ATTGTGCATCTCAT  1029

seq1  CGACATTTGC  1056
      ||||||||||
seq2  CGACATTTGC  1039