BAC Information

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BAC

Clone NameB6Ng01-323F01
Chromosome6 (Build37)
Map Location 22,771,331 - 22,772,366
singlet/doubletsinglet
Overlap genenone
Upstream geneTspan12, LOC100041358, Ing3, A430107O13Rik, LOC667307, Wnt16, D6Wsu176e, LOC100040948, LOC100040959, LOC668018, LOC668022
Downstream genePtprz1, Aass, EG668044, EG546894, EG668053, EG384356, Fezf1, Cadps2, Rnf133, Rnf148
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323F01.bB6Ng01-323F01.g
ACCGA111924GA111925
length7901,078
definitionB6Ng01-323F01.b B6Ng01-323F01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgatgtgtggacactatgcctagtcggccatcactgga
aagagaggcccattggacttgcaaactttatatgccccagtacaggggaa
taccagggccaaaaagggggagtgggtgggcaggggagtg
gaattcagaagcgaacacatctcaataaataaagtagagagtgccggcag
aagagtcttgacagtaactttggacctgcacatgtatgtgtacattcagg
catgcagataaacacacatgtgcatgacaatgcatgcacacacaccctct
ccatacacagtcgcatgcacatgtgcaagtttatcagcccatcgttgcag
ccctgggataaactgcacttgatcatcacccattatttttatagtctgtt
atatttgctttgctgttgcttaggtgagaagtatctcacgggataatttg
tctgcagtttttccttccatcttctgtttaggcttagtgttagaataagg
ctaaggatttgggaaatagccacaccttttctggaagagtttggataaag
tgtttgtttttacttcaatgtttcgggaaattcacgattgaaagtgagcc
tgtacttctctgtgggagaagctgacatgaaaataaaatttcctttatag
ccaggtatgatggtttatacctatgatcctagtacttaggaagatcatga
gtgcttagggcgcctgcctgcttccctgtgtcaagagtgataactccttt
cctcattcccaatgctgatggcttcagttaacactgctttcctccaatac
atctgaatagagatttatcaggcttaatgattttccccaagaatcagctt
tcagttttatggatgttctctactgtttctttttctaaaaccctactgag
taccacactggtattattaatctccttttgtctgacgatttgctctggtg
aattttgtcattgttagtgttttaagctggaggctgaggccatccgtttg
acggctctagtcctttcctcacccaagaacttagtttctatatattttct
tctaaatatttttaccagaggcagcccacacattttttatatgtttttcc
ctgatttaatcagcttacatttctaattttatttttccatttatttttgg
cacaggatatcagagggtagtaactttattcccaaagcattgggattcca
gaagagctttctgttgcttgaatttgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_22771331_22772366
seq2: B6Ng01-323F01.g_111_1143 (reverse)

seq1  CTCAAAATC-AGCAACAGAAGGCTC-TCTGGGAAATCCCCAAATGC-TTG  47
      |||||| || |||||||||| |||| |||||  ||||||  ||||| |||
seq2  CTCAAATTCAAGCAACAGAAAGCTCTTCTGG--AATCCC--AATGCTTTG  46

seq1  GGAATTAAGTTACTAACCCTCTGGATAATCCTTGTGCCAAAAATAAATGG  97
      ||||| |||||||| ||||||| ||| |||| ||||||||||||||||||
seq2  GGAATAAAGTTACT-ACCCTCT-GAT-ATCC-TGTGCCAAAAATAAATGG  92

seq1  -AAAATAAAATTAGAAATTGTAAGCTGATTAAAATCAGGGAAAAACATAT  146
       |||||||||||||||| |||||||||||| |||||||||||||||||||
seq2  AAAAATAAAATTAGAAA-TGTAAGCTGATT-AAATCAGGGAAAAACATAT  140

seq1  AAAAAATGTGTGGGCTGCCTCTGGT-AAAATATTTAGAAGAAAATATATA  195
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAAAAATGTGTGGGCTGCCTCTGGTAAAAATATTTAGAAGAAAATATATA  190

seq1  G-AACTAAGTTCTTGGGTGAGG-AAGGACTAGAGCCGTCAAACGGATGGC  243
      | |||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GAAACTAAGTTCTTGGGTGAGGAAAGGACTAGAGCCGTCAAACGGATGGC  240

seq1  CTCAGCCTCCAGCTTAAAACACTAACAATGACAAAATTCACCAGAGCAAA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCCTCCAGCTTAAAACACTAACAATGACAAAATTCACCAGAGCAAA  290

seq1  TCGTCAGACAAAAGGAGATTAATAATACCAGTGTGGTACTCAGTAGGGTT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCAGACAAAAGGAGATTAATAATACCAGTGTGGTACTCAGTAGGGTT  340

seq1  TTAGAAAAAGAAACAGTAGAGAACATCCATAAAACTGAAAGCTGATTCTT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAAAGAAACAGTAGAGAACATCCATAAAACTGAAAGCTGATTCTT  390

seq1  GGGGAAAATCATTAAGCCTGATAAATCTCTATTCAGATGTATTGGAGGAA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAAATCATTAAGCCTGATAAATCTCTATTCAGATGTATTGGAGGAA  440

seq1  AGCAGTGTTAACTGAAGCCATCAGCATTGGGAATGAGGAAAGGAGTTATC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTGTTAACTGAAGCCATCAGCATTGGGAATGAGGAAAGGAGTTATC  490

seq1  ACTCTTGACACAGGGAAGCAGGCAGGCGCCCTAAGCACTCATGATCTTCC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTGACACAGGGAAGCAGGCAGGCGCCCTAAGCACTCATGATCTTCC  540

seq1  TAAGTACTAGGATCATAGGTATAAACCATCATACCTGGCTATAAAGGAAA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTACTAGGATCATAGGTATAAACCATCATACCTGGCTATAAAGGAAA  590

seq1  TTTTATTTTCATGTCAGCTTCTCCCACAGAGAAGTACAGGCTCACTTTCA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTCATGTCAGCTTCTCCCACAGAGAAGTACAGGCTCACTTTCA  640

seq1  ATCGTGAATTTCCCGAAACATTGAAGTAAAAACAAACACTTTATCCAAAC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTGAATTTCCCGAAACATTGAAGTAAAAACAAACACTTTATCCAAAC  690

seq1  TCTTCCAGAAAAGGTGTGGCTATTTCCCAAATCCTTAGCCTTATTCTAAC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCAGAAAAGGTGTGGCTATTTCCCAAATCCTTAGCCTTATTCTAAC  740

seq1  ACTAAGCCTAAACAGAAGATGGAAGGAAAAACTGCAGACAAATTATCCCG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGCCTAAACAGAAGATGGAAGGAAAAACTGCAGACAAATTATCCCG  790

seq1  TGAGATACTTCTCACCTAAGCAACAGCAAAGCAAATATAACAGACTATAA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATACTTCTCACCTAAGCAACAGCAAAGCAAATATAACAGACTATAA  840

seq1  AAATAATGGGTGATGATCAAGTGCAGTTTATCCCAGGGCTGCAACGATGG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATGGGTGATGATCAAGTGCAGTTTATCCCAGGGCTGCAACGATGG  890

seq1  GCTGATAAACTTGCACATGTGCATGCGACTGTGTATGGAGAGGGTGTGTG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATAAACTTGCACATGTGCATGCGACTGTGTATGGAGAGGGTGTGTG  940

seq1  TGCATGCATTGTCATGCACATGTGTGTTTATCTGCATGCCTGAATGTACA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGCATTGTCATGCACATGTGTGTTTATCTGCATGCCTGAATGTACA  990

seq1  CATACATGTGCAGGTCCAAAGTTACTGTCAAGACTCTTCTGCC  1036
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATGTGCAGGTCCAAAGTTACTGTCAAGACTCTTCTGCC  1033