BAC Information

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BAC

Clone NameB6Ng01-324A12
Chromosome6 (Build37)
Map Location 11,029,567 - 11,030,724
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC330264, LOC100040285, LOC667650, AA545190
Downstream geneNdufa4, Phf14, LOC100040844
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324A12.bB6Ng01-324A12.g
ACCGA112453GA112454
length8581,163
definitionB6Ng01-324A12.b B6Ng01-324A12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctcaggtgagaattctttgtttagctctgagccccattttttat
tggggttatctgattttctggagtccaccttcttgagttctttttttttt
tttttttttttttttttgatgtaaaagcatgaggtagtttaatgatggag
ctctgggccattaagtatctcccacaggagacagaggtgttgaccacatg
gtggagccacaatggtggagctccgggtcgaaaagtatctcatgcaggag
acagaggttttgatcctgaggcttggaagctagggatttttatagaaaag
gggtggggctgggggaggaattggcacgttttcacattattggtccactt
aaacattagcagactgtcagaagggcgggagatagggaggctcagggcca
gtccagcctgtcttaacgaagggcttgcccgggcatgtcctggcctgttc
tgctatgttctcagccccaggtttcaaagctcacaaacaactctttgggc
tatttgacctacattacatgaatcacaggtctcaagttttaattcctttc
attcccctcttcttctactaagtaattctaatcttagaattttagaagtc
tatatctctatgtggagaatagaaatcaacaggataagaagggatagtaa
acagaactaggcagggacgcttctagtgagatttgagggtctgggtgatg
taggtgcacatggatcagatctctgtctggaactggtgagatgtcttttg
gggtacccggctcgttcactgtaaccaattgtgaccagctttctttctgc
accacctgcaagccttttaacttagtttacagattattattacaaaacat
gtaggttt
gaattctcagccatgagaaaagaactgtaatgctcagagccagtgctact
gagacagagcagttttccaggcctgggctggaattctcagctgcgagaaa
gaggagagggaaattacacccaagggaaagggtcttaaaatgaggggtaa
ccctgagctcacgaaatcttctctgtgaccatgcagaaggtcactgagac
tagtgcgaatggggacttaccagatctgggctagcgagcgtggtagtggc
tgaggatgggatgcaaacccgtagagtttctgggtccgaatcacagtgca
ccaatgttgtgatgataaaaagataaggagctataagaataggtcctggc
agggtgtgagggaagggggtgcctcagagggctcaagccaaagcatccct
tccctccttccccccagggaccagacacacgggtataataaagaatggag
tttattcagggcatggggagcggagttaagagagtagcagagacagagaa
aggtagagaaggagatagtagagaagtagatgctggccatgaccaccacg
tggagagagggggaagtaagggggcaagaggcaagggagagaagcaggag
taggagagagagaggagggggcaagcagccctttttatagggccgggcct
atctgctgttgccagttaactggggcagagtatacctgactactgccagg
aactatggggtggagtctggacaaagtaccaacattaagtatcacagtca
aacttcaatattttaagaagttttaaatataacacacaccctcatttctt
caaaattttagcagtatcaatttaaaactctgggactatattgaagcttt
agagaatgagttttcagatagagtccttgcactatacagtgtaatggtgc
cataataattcctaaatgctcctctaatcatgtctaaaagcagtcttagc
ttattgtcctctaaggacaactcatacaaactcacataccattgtaatgc
aatgagccttgacttccattatacatatttttctgtttttaagtcagaga
accgaagaattcttttggaaagaaattacacaggcattcatggtagagtt
ttcaatatccattttccaaggtacatttctcattcacacagtaactcatt
gatgcgttttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_11029567_11030724
seq2: B6Ng01-324A12.g_65_1227

seq1  GAATTCTCAGCCATGAGAAAAGAACTGTAATGCTCAGAGCCAGTGCTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGCCATGAGAAAAGAACTGTAATGCTCAGAGCCAGTGCTACT  50

seq1  GAGACAGAGCAGTTTTCCAGGCCTGGGCTGGAATTCTCAGCTGCGAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGAGCAGTTTTCCAGGCCTGGGCTGGAATTCTCAGCTGCGAGAAA  100

seq1  GAGGAGAGGGAAATTACACCCAAGGGAAAGGGTCTTAAAATGAGGGGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGAGGGAAATTACACCCAAGGGAAAGGGTCTTAAAATGAGGGGTAA  150

seq1  CCCTGAGCTCACGAAATCTTCTCTGTGACCATGCAGAAGGTCACTGAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAGCTCACGAAATCTTCTCTGTGACCATGCAGAAGGTCACTGAGAC  200

seq1  TAGTGCGAATGGGGACTTACCAGATCTGGGCTAGCGAGCGTGGTAGTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCGAATGGGGACTTACCAGATCTGGGCTAGCGAGCGTGGTAGTGGC  250

seq1  TGAGGATGGGATGCAAACCCGTAGAGTTTCTGGGTCCGAATCACAGTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGATGGGATGCAAACCCGTAGAGTTTCTGGGTCCGAATCACAGTGCA  300

seq1  CCAATGTTGTGATGATAAAAAGATAAGGAGCTATAAGAATAGGTCCTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGTTGTGATGATAAAAAGATAAGGAGCTATAAGAATAGGTCCTGGC  350

seq1  AGGGTGTGAGGGAAGGGGGTGCCTCAGAGGGCTCAAGCCAAAGCATCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGTGAGGGAAGGGGGTGCCTCAGAGGGCTCAAGCCAAAGCATCCCT  400

seq1  TCCCTCCTTCCCCCCAGGGACCAGACACACGGGTATAATAAAGAATGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCTTCCCCCCAGGGACCAGACACACGGGTATAATAAAGAATGGAG  450

seq1  TTTATTCAGGGCATGGGGAGCGGAGTTAAGAGAGTAGCAGAGACAGAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCAGGGCATGGGGAGCGGAGTTAAGAGAGTAGCAGAGACAGAGAA  500

seq1  AGGTAGAGAAGGAGATAGTAGAGAAGTAGATGCTGGCCATGACCACCACG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGAGAAGGAGATAGTAGAGAAGTAGATGCTGGCCATGACCACCACG  550

seq1  TGGAGAGAGGGGGAAGTAAGGGGGCAAGAGGCAAGGGAGAGAAGCAGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGAGGGGGAAGTAAGGGGGCAAGAGGCAAGGGAGAGAAGCAGGAG  600

seq1  TAGGAGAGAGAGAGGAGGGGGCAAGCAGCCCTTTTTATAGGGCCGGGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGAGAGAGAGGAGGGGGCAAGCAGCCCTTTTTATAGGGCCGGGCCT  650

seq1  ATCTGCTGTTGCCAGTTAACTGGGGCAGAGTATACCTGACTACTGCCAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCTGTTGCCAGTTAACTGGGGCAGAGTATACCTGACTACTGCCAGG  700

seq1  AACTATGGGGTGGAGTCTGGACAAAGTACCAACATTAAGTATCACAGTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATGGGGTGGAGTCTGGACAAAGTACCAACATTAAGTATCACAGTCA  750

seq1  AACTTCAATATTTTAAGAAGTTTTAAATATAACACACA-CCTCATTTCTT  799
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AACTTCAATATTTTAAGAAGTTTTAAATATAACACACACCCTCATTTCTT  800

seq1  CAAAATTTTAGCAGTATCAA-TTAAAACTCTGGGACTATATTGAA-CCTT  847
      |||||||||||||||||||| |||||||||||||||||||||||| | ||
seq2  CAAAATTTTAGCAGTATCAATTTAAAACTCTGGGACTATATTGAAGCTTT  850

seq1  AGAGAATGAGTTTTCAGATAGAGTCCTTGCACTATACAGTGTAATGGTGC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATGAGTTTTCAGATAGAGTCCTTGCACTATACAGTGTAATGGTGC  900

seq1  CATAATAATTCCTAAATGCTCCTCTAATCATGTCTAAAAGCAGTC-TAGC  946
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CATAATAATTCCTAAATGCTCCTCTAATCATGTCTAAAAGCAGTCTTAGC  950

seq1  TTATTGTCCTCTAAGAACAACTCATACAAACTCACATACCATTGTTATGC  996
      ||||||||||||||| ||||||||||||||||||||||||||||| ||||
seq2  TTATTGTCCTCTAAGGACAACTCATACAAACTCACATACCATTGTAATGC  1000

seq1  AATGAGCCTTTGACTTCCATATAACATA-TTTTCTGTTTTTAAAGTCAGA  1045
      |||||||| |||||||||||   ||||| |||||||||||| ||||||||
seq2  AATGAGCC-TTGACTTCCATTATACATATTTTTCTGTTTTT-AAGTCAGA  1048

seq1  GAAACCGAG-ATTCTTTTG--AAGAA--TACACA-GCA-TCATGGTTAGA  1088
      ||| |  || |||||||||  |||||  |||||| ||| |||||| ||||
seq2  GAACCGAAGAATTCTTTTGGAAAGAAATTACACAGGCATTCATGG-TAGA  1097

seq1  ATTTTCAATATCCATTTT-CAAAGTACATTTCCTCATTCCACAAGTTAAC  1137
       ||||||||||||||||| ||| |||||||| |||||| ||||   ||||
seq2  GTTTTCAATATCCATTTTCCAAGGTACATTT-CTCATT-CACACAGTAAC  1145

seq1  TCATTTGATTGCTGTTTTTTT  1158
      ||| |||| ||| ||||||||
seq2  TCA-TTGA-TGC-GTTTTTTT  1163