BAC Information

Click to search

BAC

Clone NameB6Ng01-325I16
Chromosome6 (Build37)
Map Location 26,258,113 - 26,258,641
singlet/doubletsinglet
Overlap genenone
Upstream geneGpr37, Pot1a, EG626912, LOC100041210
Downstream geneLOC100041247, Grm8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325I16.b
ACCGA113574
length1,004
definitionB6Ng01-325I16.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctctctgtctttaaacatatttaacatttttaatgaattattt
tatttatttacgttccaaatgttgtccttcttcctggtcacctctgcaag
ttcttcccctatcccccatccactttgcttttgagagggtactcccctac
catcttccacctcaccccactagcatcctccttccctgtgacatcaagtt
tctacagaattaagcccattctttcctactgaggccagacaaagcattcc
tctgttacttctttagtgggagccacagaccaggccatgtatgttctttg
gctggtaaattagcctctgggagctctgaggggtccagcttagttgatat
gtattttcttcctatggggttgtgattcccttcggctccttcagtctttc
ccctcactcttccatggggtccccaacttcagtccaatgtttggctgtaa
gtacctgtctctctcagtcagctgctggtagagtctctcagaggatagtc
atgctagactcctgcaagctgatgtcatgacatcagctgtacaagggatg
gatcccaagtttgaagtctagagacaccaatgcacctagaaaatatttta
ccccaaattgctcctgtctaaaagaaatgcaggcacaaaaatggagtata
gactgagggaatgtctgaccagtgagaagtctaacttgtggtccatccca
tgggtgggcactaatccctgacactatttctgatgctatgctatacttgt
aaacaggtgcctagcataggtgtcttgtgagaggctctacccagctagaa
cataggcagatacccacagccaagcattgaacagatgtggattcctatgg
aatgataaggataggattgaaggaactgaagaggatgacaatcccaaagg
aaggccacaagtctcaagtaatctggaacactgagtgttcccagagacag
agccaccgaacaaaatcatacatgagatgctctgagtccctggaatgcat
ctct
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_26258113_26258641
seq2: B6Ng01-325I16.b_44_572

seq1  GAATTCTCTCTCTGTCTTTAAACATATTTAACATTTTTAATGAATTATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTCTGTCTTTAAACATATTTAACATTTTTAATGAATTATTT  50

seq1  TATTTATTTACGTTCCAAATGTTGTCCTTCTTCCTGGTCACCTCTGCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTACGTTCCAAATGTTGTCCTTCTTCCTGGTCACCTCTGCAAG  100

seq1  TTCTTCCCCTATCCCCCATCCACTTTGCTTTTGAGAGGGTACTCCCCTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCCCTATCCCCCATCCACTTTGCTTTTGAGAGGGTACTCCCCTAC  150

seq1  CATCTTCCACCTCACCCCACTAGCATCCTCCTTCCCTGTGACATCAAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTCCACCTCACCCCACTAGCATCCTCCTTCCCTGTGACATCAAGTT  200

seq1  TCTACAGAATTAAGCCCATTCTTTCCTACTGAGGCCAGACAAAGCATTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAGAATTAAGCCCATTCTTTCCTACTGAGGCCAGACAAAGCATTCC  250

seq1  TCTGTTACTTCTTTAGTGGGAGCCACAGACCAGGCCATGTATGTTCTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTACTTCTTTAGTGGGAGCCACAGACCAGGCCATGTATGTTCTTTG  300

seq1  GCTGGTAAATTAGCCTCTGGGAGCTCTGAGGGGTCCAGCTTAGTTGATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTAAATTAGCCTCTGGGAGCTCTGAGGGGTCCAGCTTAGTTGATAT  350

seq1  GTATTTTCTTCCTATGGGGTTGTGATTCCCTTCGGCTCCTTCAGTCTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTCTTCCTATGGGGTTGTGATTCCCTTCGGCTCCTTCAGTCTTTC  400

seq1  CCCTCACTCTTCCATGGGGTCCCCAACTTCAGTCCAATGTTTGGCTGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCACTCTTCCATGGGGTCCCCAACTTCAGTCCAATGTTTGGCTGTAA  450

seq1  GTACCTGTCTCTCTCAGTCAGCTGCTGGTAGAGTCTCTCAGAGGATAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTGTCTCTCTCAGTCAGCTGCTGGTAGAGTCTCTCAGAGGATAGTC  500

seq1  ATGCTAGACTCCTGCAAGCTGATGTCATG  529
      |||||||||||||||||||||||||||||
seq2  ATGCTAGACTCCTGCAAGCTGATGTCATG  529