BAC Information

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BAC

Clone NameB6Ng01-325L07
Chromosome6 (Build37)
Map Location 130,737,321 - 130,738,080
singlet/doubletsinglet
Overlap geneLOC625566
Upstream geneKlra17, Klra5, LOC667764, Klra6, LOC100038893, LOC100038894, LOC100038895, Klra4, LOC667769, LOC100038897, Klra8, EG654449, Klra9, Klra7, LOC100038898, Klra12, Klra10, Klra13, Klra3, Klra1, LOC100038902, LOC100038903, LOC625436, EG625473, LOC640779, LOC667793, EG667798, EG625558
Downstream geneEG636947, LOC625628, EG625648, LOC667830, EG434094, Klra2, LOC434095, 2010012C16Rik, Styk1, Csda, LOC625758, 5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325L07.bB6Ng01-325L07.g
ACCGA113696GA113697
length1,2441,093
definitionB6Ng01-325L07.b B6Ng01-325L07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacctccattaaatagaaaggcacccaaatgaccaaaccactgtg
aaaatttctgttctgaatttgttcctgtgtgaaagcactacagtgtcaaa
atttgtgaagagattgtaggaaagctggtccattgactgttcagtccatt
gactgacctaccaggggattcatctcgtagcagggtaccaaggcttgaca
ctgctatttattcaatgttgtgctttcagaatgcagcctattatggctgt
cttttgagaggccctaccaggagctgactgagacagaagcacatactagc
aaccatccattggactgaagtcagaaacccctatggatgaatgaggggaa
taattaacgaagctgatcggcatatgactccataggaagaccagcaacat
tatctccctgtgaaccccgataaccccccaaatactgaaccaacagagat
gcagcattccctgggtattctgaggcctctggtgtatatgtagcagaaga
ctacctcatctaatctccgtgggagaagaggtgcctaatatgcatggaac
tgaagccctagggaattgtgagttctgtcagagggaagcgtcctctctga
ggtatgaggtggcagattgggatgaggaacactttgagtagggactggtg
aagggtgcaatggctgtagtgtaaatgattaaaaattgatcatcatcata
ataatatttactttaagagaaagaagagggtcttcagaacatgatgcact
ctaatatgatgaaaatttattcatggtgatggagcctcacaatttttatc
tcattctctctgtatcgaagtttcattctaccttatttttcttctctcca
tttctttgctttcttttttattactttttttcttttctgttcaattttgg
tatatctttgtgtaaaagagctttgtaaagcaacagaagccaggtgacca
cttcaggaagtatatttttttttcctttctcacatagtgggtctttagga
ggaacttaggtcttaaaccttggtgactgtcacttttgtgtaaagcatct
tcttcagtaaaacttcttctattaatataggcactttaccactttatatt
ttcttatttctgtggccacatcttcactatgaccacattggaaccatcac
tcaatctacacttgtacgatattattgttccattctcccatataacaggt
tccatgtgaatgggccatataccccagattttcacgaaaataat
gaattctgtaatgaactttaaattttgaggattgtgtaaaagatttgcca
cattcattacatttgtaaggtttctctcctgtatgaattctgtagtgatt
tttaagcactttgttctgtgtaaaacatttgccacattcattacatttgt
aaggtttctctcctttgtggattctgtagtgaacttgaaattttgaggat
tgtgtaaaagatttcccacatttgttacatttgtaaggtttctctcctgt
atggactctgtagtgatttttaagcactttgttctgtgtaaaacatttgc
cacattcattacatttgtaaggcttttctcctgtatggattctgtagtga
actttaaagtctgtgttccatgtaaaagatttgccacattcattacattt
gtaaggtttctctcctgtatgaattctgtagtgatttttaagcactttgt
tctgtgtaaaacatttgccacattcattacatttgtaaggcttttctcct
gtatggattctgtagtgaactttaaagtctgtgttccttgtaaaagattt
gccacattcattacatttgtaaggtttctctcctgtatgaattctgtagt
gaacttttagcactttgttctgtgcaaaagatttgccacattcactgcat
ttgtaaggcttttcttctgtatggattctgtagtgaactttaagctctga
gttctttgtaaaagatttcccacattcattacatttgtaaggtttctctc
ctgtgtggattctgtagtgaacttgaagttttgaggactgtgaaaatgat
tttgcgcagttattagagttatgaagtctttctcctgtacagttttcatg
gctcactttgagaattgaggagcaggtaaagaatttttcaaattcattac
atttgtaaggtgtctcttgggtaggagttctataataagcttgagatttg
aggactctataaatgacttaccatacttatacatttatttactttctgtg
ctttcttgaaatttaacgattcatttgagaaatccctgtatgtatcataa
gagtatctctggactctccatatcatgtccagtattaccagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_130737321_130738080
seq2: B6Ng01-325L07.g_404_1157

seq1  TTCTGTAGTGAACTTTAAAGTCTGTGTTCCATGTAAAAGATTTGCCACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTAGTGAACTTTAAAGTCTGTGTTCCATGTAAAAGATTTGCCACAT  50

seq1  TCATTACATTTGTAAGGTTTCTCTCCTGTATGAATTCTGTAGTGATTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTACATTTGTAAGGTTTCTCTCCTGTATGAATTCTGTAGTGATTTTT  100

seq1  AAGCACTTTGTTCTGTGTAAAACATTTGCCACATTCATTACATTTGTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACTTTGTTCTGTGTAAAACATTTGCCACATTCATTACATTTGTAAG  150

seq1  GCTTTTCTCCTGTATGGATTCTGTAGTGAACTTTAAAGTCTGTGTTCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTCTCCTGTATGGATTCTGTAGTGAACTTTAAAGTCTGTGTTCCTT  200

seq1  GTAAAAGATTTGCCACATTCATTACATTTGTAAGGTTTCTCTCCTGTATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAGATTTGCCACATTCATTACATTTGTAAGGTTTCTCTCCTGTATG  250

seq1  AATTCTGTAGTGAACTTTTAGCACTTTGTTCTGTGCAAAAGATTTGCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGTAGTGAACTTTTAGCACTTTGTTCTGTGCAAAAGATTTGCCAC  300

seq1  ATTCACTGCATTTGTAAGGCTTTTCTTCTGTATGGATTCTGTAGTGAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACTGCATTTGTAAGGCTTTTCTTCTGTATGGATTCTGTAGTGAACT  350

seq1  TTAAGCTCTGAGTTCTTTGTAAAAGATTTCCCACATTCATTACATTTGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCTCTGAGTTCTTTGTAAAAGATTTCCCACATTCATTACATTTGTA  400

seq1  AGGTTTCTCTCCTGTGTGGATTCTGTAGTGAACTTGAAGTTTTGAGGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCTCTCCTGTGTGGATTCTGTAGTGAACTTGAAGTTTTGAGGACT  450

seq1  GTGAAAATGATTTTGCGCAGTTATTAGAGTTATGAAGTCTTTCTCCTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAATGATTTTGCGCAGTTATTAGAGTTATGAAGTCTTTCTCCTGTA  500

seq1  CAGTTTTCATGGCTCACTTTGAGAATTGAGGAGCAGGTAAAGAATTTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTCATGGCTCACTTTGAGAATTGAGGAGCAGGTAAAGAATTTTTC  550

seq1  AAATTCATTACATTTGTAAGGTGTCTCTTGGGTAGGAGTTCTATAATAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCATTACATTTGTAAGGTGTCTCTTGGGTAGGAGTTCTATAATAAG  600

seq1  CTTGAAGATTTGAGGACTCTATAAATGACTTACCATACTTATTACATTTA  650
      |||| |||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTTG-AGATTTGAGGACTCTATAAATGACTTACCATACTTA-TACATTTA  648

seq1  TTTACTTTCTGTGCTTTCTTGAAATTTAACGATTCATTTGAGACATCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTTACTTTCTGTGCTTTCTTGAAATTTAACGATTCATTTGAGAAATCCCT  698

seq1  GTATGTATCATAGAGGTATCTCTTGGACTCTCCATTAATCCATGGTCCAG  750
      ||||||||||||   ||||||| ||||||||||||  || ||| ||||||
seq2  GTATGTATCATAAGAGTATCTC-TGGACTCTCCAT--AT-CAT-GTCCAG  743

seq1  TA-TACCAGCT  760
      || ||||||||
seq2  TATTACCAGCT  754