BAC Information

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BAC

Clone NameB6Ng01-327H19
Chromosome6 (Build37)
Map Location 18,084,840 - 18,086,028
singlet/doubletsinglet
Overlap genenone
Upstream geneEG232599, Cav2, Cav1, Met, Capza2, St7, Wnt2, Asz1
Downstream geneLOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7, LOC626180
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-327H19.bB6Ng01-327H19.g
ACCGA115021GA115022
length1,1891,158
definitionB6Ng01-327H19.b B6Ng01-327H19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacaaattaaagatgctgcactccacaaagttagtgttgaggat
ttctgaaatgttaagacatggtcattccttaatcttcctcccttagaaaa
agaattatagctcttacttcttgtggagaatgagaactaagctgatccat
gagccagttgctagtagaaattagtgttgtgctgtgtttgtgatatttgc
tgagttttagtgtagtattcgtgcacacagtgcactcattcaagatggct
gttgttgcaagagtagaaactgggaaagtatttcttctcatgtgttcatt
ttagatgattcagttcttattttaatgtggccatttaatctgatctatat
tagaaagtgacatactttagtatagtttttattttcatcccaatcttaac
ccataagcaatatgcttccatctgaacagttcttccatcaggaaatgaag
tattccaatttagtctagcctaatgaaaatttcataacactaaactttcc
tgtttaagttatacttctttccagtatgccgtctaagcattttaactttt
ctcttttcttcctttcttcttttttttaaccagcagagggcagataagac
agagaaaagaaatgacaagaaattggcctcagtttcaagtggttaatact
tctctccaagtcatatataaagtgagttagttggctttctcttttaaaaa
cagcctaataataagatttagtttcttacacaggtatctaacttgactaa
ggtatctaataaaattagtacttttaattttcaattgtttacaaatcact
aattttaaaagtctaaatattctttatattttgaagtgatgtggtgaaat
accccttcctactttgagcagagttaaacgtctttcttccatgattttga
attcacttatggatagatttatatgactcttttcttctgttttaataaag
ccattagctatttttgtagtttgagtactacatatcttaaaaataattga
aagtaactcaaatgacacacaatcattatctttttctttttggcaataag
tgctccacagaaggcttagtactgttgtaggatattaggtaaaatgtttt
ctcttgcacatttaaagttgttcatcacaataaagaaacatcggttcctg
aacattaggtgtacaatacctacgttcattccaacagat
gaattctcacctgaaaaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacactagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaattccgctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcatg
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacatccatggaaggagttacagagacaaactttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcactgtcagctaatggatggatcatagggctccca
atggaggagctagagaaagtagccaggagctaaagggatctgcaccccta
taggtggacacatatgaactaaccagtaccccgagctctgactctagctg
catatatatcaaagatgactagcgacattcagtgaaagagaggtccattg
gactggcacttaatgcctagtacagcaacccagtcaaagggcagattggg
ttgggcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18084840_18086028
seq2: B6Ng01-327H19.b_48_1236

seq1  GAATTCCACAAATTAAAGATGCTGCACTCCACAAAGTTAGTGTTGAGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAAATTAAAGATGCTGCACTCCACAAAGTTAGTGTTGAGGAT  50

seq1  TTCTGAAATGTTAAGACATGGTCATTCCTTAATCTTCCTCCCTTAGAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAATGTTAAGACATGGTCATTCCTTAATCTTCCTCCCTTAGAAAA  100

seq1  AGAATTATAGCTCTTACTTCTTGTGGAGAATGAGAACTAAGCTGATCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTATAGCTCTTACTTCTTGTGGAGAATGAGAACTAAGCTGATCCAT  150

seq1  GAGCCAGTTGCTAGTAGAAATTAGTGTTGTGCTGTGTTTGTGATATTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAGTTGCTAGTAGAAATTAGTGTTGTGCTGTGTTTGTGATATTTGC  200

seq1  TGAGTTTTAGTGTAGTATTCGTGCACACAGTGCACTCATTCAAGATGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTTAGTGTAGTATTCGTGCACACAGTGCACTCATTCAAGATGGCT  250

seq1  GTTGTTGCAAGAGTAGAAACTGGGAAAGTATTTCTTCTCATGTGTTCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGCAAGAGTAGAAACTGGGAAAGTATTTCTTCTCATGTGTTCATT  300

seq1  TTAGATGATTCAGTTCTTATTTTAATGTGGCCATTTAATCTGATCTATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATGATTCAGTTCTTATTTTAATGTGGCCATTTAATCTGATCTATAT  350

seq1  TAGAAAGTGACATACTTTAGTATAGTTTTTATTTTCATCCCAATCTTAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGTGACATACTTTAGTATAGTTTTTATTTTCATCCCAATCTTAAC  400

seq1  CCATAAGCAATATGCTTCCATCTGAACAGTTCTTCCATCAGGAAATGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAGCAATATGCTTCCATCTGAACAGTTCTTCCATCAGGAAATGAAG  450

seq1  TATTCCAATTTAGTCTAGCCTAATGAAAATTTCATAACACTAAACTTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCAATTTAGTCTAGCCTAATGAAAATTTCATAACACTAAACTTTCC  500

seq1  TGTTTAAGTTATACTTCTTTCCAGTATGCCGTCTAAGCATTTTAACTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAAGTTATACTTCTTTCCAGTATGCCGTCTAAGCATTTTAACTTTT  550

seq1  CTCTTTTCTTCCTTTCTTCTTTTTTTTAACCAGCAGAGGGCAGATAAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTCTTCCTTTCTTCTTTTTTTTAACCAGCAGAGGGCAGATAAGAC  600

seq1  AGAGAAAAGAAATGACAAGAAATTGGCCTCAGTTTCAAGTGGTTAATACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAAGAAATGACAAGAAATTGGCCTCAGTTTCAAGTGGTTAATACT  650

seq1  TCTCTCCAAGTCATATATAAAGTGAGTTAGTTGGCTTTCTCTTTTAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCAAGTCATATATAAAGTGAGTTAGTTGGCTTTCTCTTTTAAAAA  700

seq1  CAGCCTAATAATAAGATTTAGTTTCTTACACAGGTATCTAACTTGACTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTAATAATAAGATTTAGTTTCTTACACAGGTATCTAACTTGACTAA  750

seq1  GGTATCTAATAAAATTAGTACTTTTAATTTTCAATTGTTTACAAATCACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCTAATAAAATTAGTACTTTTAATTTTCAATTGTTTACAAATCACT  800

seq1  AATTTTAAAAGTCTAAATATTCTTTATATTTTGAAGTGATGTGGTGAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTAAAAGTCTAAATATTCTTTATATTTTGAAGTGATGTGGTGAAAT  850

seq1  ACCCCTTCCTACTTTGAGCAGAGTTAAACGTCTTTCTTCCATGATTTTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTTCCTACTTTGAGCAGAGTTAAACGTCTTTCTTCCATGATTTTGA  900

seq1  ATTCACTTATGGATAGATTTATATGACTCTTTTCTTCTGTTTTAATAAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACTTATGGATAGATTTATATGACTCTTTTCTTCTGTTTTAATAAAG  950

seq1  CCATTAGCTATTTTTGTAGTTTGAGTACTACATATCTTAAAAATAATTGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTAGCTATTTTTGTAGTTTGAGTACTACATATCTTAAAAATAATTGA  1000

seq1  AAGTAACTCAAATGACACACAATCAATTATC-TTTTCTTTTTGGCAATAA  1049
      |||||||||||||||||||||||| |||||| ||||||||||||||||||
seq2  AAGTAACTCAAATGACACACAATC-ATTATCTTTTTCTTTTTGGCAATAA  1049

seq1  GTGCTCCACAGGAAGGCTTAAGTACTGTTGTAGGGATAT--AGTAAAATG  1097
      |||||||||| |||||||| |||||||||||| ||||||   ||||||||
seq2  GTGCTCCACA-GAAGGCTT-AGTACTGTTGTA-GGATATTAGGTAAAATG  1096

seq1  TTTTCTCTTGCAACATTAAGGTTGTTTCATCAACAATA---AGACATCGT  1144
      ||||||||||||   |||| |||| |||||| ||||||   | |||||| 
seq2  TTTTCTCTTGCACATTTAAAGTTG-TTCATC-ACAATAAAGAAACATCGG  1144

seq1  TTCCTGAACATTAGGTGGTACAATTACCTACG-TCA-TCCAACAGAT  1189
      |||||||||||||||| |||||| |||||||| ||| ||||||||||
seq2  TTCCTGAACATTAGGT-GTACAA-TACCTACGTTCATTCCAACAGAT  1189