BAC Information

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BAC

Clone NameB6Ng01-328D20
Chromosome6 (Build37)
Map Location 45,129,316 - 45,130,145
singlet/doubletsinglet
Overlap geneCntnap2
Upstream geneLOC100040210
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328D20.bB6Ng01-328D20.g
ACCGA115559GA115560
length1,2111,168
definitionB6Ng01-328D20.b B6Ng01-328D20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacttaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggtgagaagctggaagcaatcccactaaa
atcaggaactagacaaggctgtccactttctctctacctattcaacattg
tacttgaagtcctagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaggaagaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagatctcctaagcc
tgataaacagcttctgtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaaggataaacaggctgagaaagaaactcg
ggaaacaacatctttctcaatagtcacaaataatataaaataccttggca
tgacgctaactaaggaagtgaaagatctgtatgataagaacttcaagtct
ctgaagaaagaaattaaagaagatcttaggtgatggaaagatctcccatg
ctcatggattggcaggatcaatatagtaaaaatagctatcttgccaaatg
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattacaaagggcaatctgcaaattcatcaggaataacaaaaaacc
taggatagcaaaaattcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctgtactatagagcaattgtgataaaaactgca
tggtacttgtatagcgacagacaagtagaccaatggaatagaattgaaga
cccagaagtgaacccacacacctatggtcacttgatctttgacaagggag
caaaaaccatccagtggaaaaaagacagcattttcaacaatggtgctggc
acaattggcggttatcatgtagaagatgggaattgatccattcctatctc
tgtactaaggtcaaatctaagtggattaggactcacataaaaccagagac
actgaaacttagagagagaaaatagggaaagctcgaagattgtacagggg
aaatcttgaatagaaacagcattgcctgtgctgtaagatcgagaatcaac
atgactcataaattgcaggttctgcaagccaagaacctgtcgataggacg
aaggtgcatca

gaattctgtactttttttggaaaataaccacttattagtgaatacatacc
atgcatgtcctttgggggctgagttacctcactcaggacaatattttcta
gttccatccattggtcttcaaaactcaggatgtctttgttcttaataact
gagtaatattccattgtgtaagtgaatcacattttctgtatccattcttc
tgtcatggtacatctgggttgttttcagcttctggctatcacagacaagg
ttgctatgaacataatgaaacatgtacccctgtggcatggcggggcatct
tttgggtatattctcgagtggtattgctggatcttcatatagatcaattt
tcaattttctgaggagccgccagattgatttgcagactggttgtacctgt
ttgcaatcccatccacaatggaggagtgtggatttctctacatcctggcc
agtatgttttgtcacctgcattttttatcttagccattctgaatggtgta
aggtggaatctcagggttgttttgattttcatttctctgatcattaaaga
ctttgaacatttttttaggttcttttcagccatttgagattcctcttttg
tgaattcttggtttagtgctatacctcatttttttttaaactgggttgtt
tggtttttttggtggttagcttcttaagttctttatatattttagatatt
agctctacattggatgtggggttagtgaagattttttcccaatctcttgg
ttgcagatttgtcttattaaatatgtcctttgccttacagaagctttcca
gttttatgaagtcccatttatgacttcttgatcttgtttttagatgtaaa
tacaaatttcttaatgggcactggaacacaggtacctaactaggacccac
agccacacacgggaatgctttccttttcccttagtgactgttaaatattc
ctactattaatgaaagtgttatatattaataataatgttcttcatattaa
attttaaatattttgagtattaatacaggtataccatgttacatgataca
tgtattcctcatttttctgccacaacttatcctctagatctccctccaca
agtccccttacaacttccatgtttccatttgagagattaataaataatgc
ttaaggctttattactgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_45129316_45130145
seq2: B6Ng01-328D20.g_404_1233

seq1  ATAGATCAATTTTCAATTTTCTGAGGAGCCGCCAGATTGATTTGCAGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATCAATTTTCAATTTTCTGAGGAGCCGCCAGATTGATTTGCAGACT  50

seq1  GGTTGTACCTGTTTGCAATCCCATCCACAATGGAGGAGTGTGGATTTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTACCTGTTTGCAATCCCATCCACAATGGAGGAGTGTGGATTTCTC  100

seq1  TACATCCTGGCCAGTATGTTTTGTCACCTGCATTTTTTATCTTAGCCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCCTGGCCAGTATGTTTTGTCACCTGCATTTTTTATCTTAGCCATT  150

seq1  CTGAATGGTGTAAGGTGGAATCTCAGGGTTGTTTTGATTTTCATTTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATGGTGTAAGGTGGAATCTCAGGGTTGTTTTGATTTTCATTTCTCT  200

seq1  GATCATTAAAGACTTTGAACATTTTTTTAGGTTCTTTTCAGCCATTTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATTAAAGACTTTGAACATTTTTTTAGGTTCTTTTCAGCCATTTGAG  250

seq1  ATTCCTCTTTTGTGAATTCTTGGTTTAGTGCTATACCTCATTTTTTTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTCTTTTGTGAATTCTTGGTTTAGTGCTATACCTCATTTTTTTTTA  300

seq1  AACTGGGTTGTTTGGTTTTTTTGGTGGTTAGCTTCTTAAGTTCTTTATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGGTTGTTTGGTTTTTTTGGTGGTTAGCTTCTTAAGTTCTTTATAT  350

seq1  ATTTTAGATATTAGCTCTACATTGGATGTGGGGTTAGTGAAGATTTTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGATATTAGCTCTACATTGGATGTGGGGTTAGTGAAGATTTTTTC  400

seq1  CCAATCTCTTGGTTGCAGATTTGTCTTATTAAATATGTCCTTTGCCTTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCTCTTGGTTGCAGATTTGTCTTATTAAATATGTCCTTTGCCTTAC  450

seq1  AGAAGCTTTCCAGTTTTATGAAGTCCCATTTATGACTTCTTGATCTTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTTTCCAGTTTTATGAAGTCCCATTTATGACTTCTTGATCTTGTT  500

seq1  TTTAGATGTAAATACAAATTTCTTAATGGGCACTGGAACACAGGTACCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGATGTAAATACAAATTTCTTAATGGGCACTGGAACACAGGTACCTA  550

seq1  ACTAGGACCCACAGCCACACACGGGAATGCTTTCCTTTTCCCTTAGTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGACCCACAGCCACACACGGGAATGCTTTCCTTTTCCCTTAGTGAC  600

seq1  TGTTAAATATTCCTACTATTAATGAAAGTGTTATATATTAATAATAATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAATATTCCTACTATTAATGAAAGTGTTATATATTAATAATAATGT  650

seq1  TCTTCATATTTAATTTTTAAATATTTTTGAGTATTAATACAGGTATACCA  700
      |||||||| |||| ||||||||| ||||||||||||||||||||||||||
seq2  TCTTCATA-TTAAATTTTAAATA-TTTTGAGTATTAATACAGGTATACCA  698

seq1  TGTTACATGATTACATGTATT-CTCCATTTTCTG-CAC-ACTTATTCCTC  747
      |||||||||| |||||||||| |||  ||||||| ||| ||||| |||||
seq2  TGTTACATGA-TACATGTATTCCTCATTTTTCTGCCACAACTTA-TCCTC  746

seq1  TAGATCTCCCTCAACAAGTCCCCTTACAACTTCATTGTTTCCCTTT-TGA  796
      |||||||||||| ||||||||||||||||||||  ||||||| |||  ||
seq2  TAGATCTCCCTCCACAAGTCCCCTTACAACTTCCATGTTTCCATTTGAGA  796

seq1  GATAAATAAATAAGTGCTTAAGTC-TTATTACTGC  830
      ||| ||||||||| |||||||| | ||||||||||
seq2  GATTAATAAATAA-TGCTTAAGGCTTTATTACTGC  830


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