BAC Information

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BAC

Clone NameB6Ng01-329B19
Chromosome6 (Build37)
Map Location 53,731,152 - 53,732,280
singlet/doubletsinglet
Overlap genenone
Upstream geneJazf1, LOC666259, LOC666516, D430007I03, Creb5, LOC384386
Downstream gene1200009O22Rik, Cpvl, LOC666305, Chn2, LOC100042056, Prr15, EG640926, Wipf3, Scrn1, Fkbp14, Plekha8, LOC100041292, 2410066E13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329B19.bB6Ng01-329B19.g
ACCGA116178GA116179
length1,1251,186
definitionB6Ng01-329B19.b B6Ng01-329B19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactcacaccttcatggacagcggtggactaatgaaggcaagaat
gatttaactttactggtagcttcgggtctcaacaaggctattatgtgcac
ttgacaactctcagagacccagaaagggcttgtattttttttttccttac
cacattaaatttgggttaaatatgtaaatacacacaatggccaccagagg
gcgacaacctctcagcatgattgagtagaagtcctctagccctgttgaca
acggcttgattcctgccttgaatgtgtgcattgactggtattttaaataa
gtaaataaatccaacataaatgtcaaaagagacatgaaggtaaatgcctt
aaatggttttctaaacaaagagttgtagaaaccacagtatagtcagatga
cagataagagataggtaggcagatttatcaattgactgactcagggtcag
ggccttgcatgtagcccagaatggccttcaattcacaatgtctctactcc
ctcaagcacgaaccaagattacaggcttgtaccaccatgacttgttgtta
gttttgtggttattcacagcccatttctttctaaaatataaattaaaaga
cagagccccactctttgctgggatggtctcccaggccttgctctgaaagc
ccattccaccacagtgcctctgctcagaattgctttcttgcttccagcat
aggcagacaacctaagtctagcttttaattttatctcttattttttgaga
atttcaagtgtatgatgcagcagatgacgtcaccacacactttggctata
aggacatagagaaatcaatctcacactaactggagaacttcctccttgct
ggctcgttttcacaagtgcctgtggtctgtgcaggctcctggtgggaaaa
aataaagatcttctcagcgctagacctcgcatccttccatgctgagctgc
caggcaatatctgcccacttctgccatagtggcatggctgttttcgggta
ataagccacttgatgagttttgaactctgttctgttggaggaatgtcatg
ccaggtactagacctgttcaaagccctggcctgggagagcatatggctat
tttactaaatgaattatgctgttaa
gaattctttgggaagcattagtattaggttttggaggtccgatgggtcca
gccatgaatccatctaggtggtgagttacttttaggtgaaagaattgttt
ttgatattggcctcactgcttgaggtcactttaaattgtcttggtttggt
ttggggacatcatttcatctaaaaagccatccatttgttttagattttcg
gaattataaaatatatgcttttaaaggtgtgtcctagtgagttctgagtt
tcatcagcatctttcacgactttcatctctaattttgtccactcaagact
tttgtttagcttggctaaggctttgtcaatctaatttaattttttttcaa
agaattgactctttgtttcattgtttttttttttttttctcattttcaca
ttgttaatgtctgtcctgatcttattattactttccttctactgatttga
ggcctggtttttcttgttttcccagttccctaggatatataaataagtta
cctacttgcaatttctctgatttcttaacatgggcacttactgcgataag
cttccttcttaagactgtaggggtttttttttagtttgtggtgttgttat
tttcagtttctaggaatgtattgactttctccttgatttcttcaagcacc
cgtgcaccagtgttatctcatctctgagatcctgcgcatgctctgctgtt
gcccttgctgatgatctggaaatttacggcgttgcaaatcaagagaatac
aagaagttgtgtcagttttcttgtgtatgtggagacttgctttgtgtttt
aagatatgatctaattagatcgtgatccagggctgctgagaaacagtgtg
tgctctacactggaatacttaagtccatttgacccatgataccattaggc
tggtttctctgtttatttcaacttattactttatttatttggctgtttgg
tctttaataggacagggtctcacttggtgttacctggtctgccctgggat
tctttataagtaacgaggctggtgtgactccacagagactgctgcttctg
cttctgtagcactggatacagcacctacacacccggaccttctggttttc
taggacgggaaaatggggctgttcattgggaagatagcatccagtaacca
gataattatcgtgtttggaagacgcgagactgacgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_53731152_53732280
seq2: B6Ng01-329B19.b_43_1167

seq1  GAATTCACTCACACCTTCATGGACAGCGGTGGACTAATGAAGGCAAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCACACCTTCATGGACAGCGGTGGACTAATGAAGGCAAGAAT  50

seq1  GATTTAACTTTACTGGTAGCTTCGGGTCTCAACAAGGCTATTATGTGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAACTTTACTGGTAGCTTCGGGTCTCAACAAGGCTATTATGTGCAC  100

seq1  TTGACAACTCTCAGAGACCCAGAAAGGGCTTGTATTTTTTTTTTCCTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAACTCTCAGAGACCCAGAAAGGGCTTGTATTTTTTTTTTCCTTAC  150

seq1  CACATTAAATTTGGGTTAAATATGTAAATACACACAATGGCCACCAGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTAAATTTGGGTTAAATATGTAAATACACACAATGGCCACCAGAGG  200

seq1  GCGACAACCTCTCAGCATGATTGAGTAGAAGTCCTCTAGCCCTGTTGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGACAACCTCTCAGCATGATTGAGTAGAAGTCCTCTAGCCCTGTTGACA  250

seq1  ACGGCTTGATTCCTGCCTTGAATGTGTGCATTGACTGGTATTTTAAATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCTTGATTCCTGCCTTGAATGTGTGCATTGACTGGTATTTTAAATAA  300

seq1  GTAAATAAATCCAACATAAATGTCAAAAGAGACATGAAGGTAAATGCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATAAATCCAACATAAATGTCAAAAGAGACATGAAGGTAAATGCCTT  350

seq1  AAATGGTTTTCTAAACAAAGAGTTGTAGAAACCACAGTATAGTCAGATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTTTTCTAAACAAAGAGTTGTAGAAACCACAGTATAGTCAGATGA  400

seq1  CAGATAAGAGATAGGTAGGCAGATTTATCAATTGACTGACTCAGGGTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAAGAGATAGGTAGGCAGATTTATCAATTGACTGACTCAGGGTCAG  450

seq1  GGCCTTGCATGTAGCCCAGAATGGCCTTCAATTCACAATGTCTCTACTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTGCATGTAGCCCAGAATGGCCTTCAATTCACAATGTCTCTACTCC  500

seq1  CTCAAGCACGAACCAAGATTACAGGCTTGTACCACCATGACTTGTTGTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGCACGAACCAAGATTACAGGCTTGTACCACCATGACTTGTTGTTA  550

seq1  GTTTTGTGGTTATTCACAGCCCATTTCTTTCTAAAATATAAATTAAAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTGGTTATTCACAGCCCATTTCTTTCTAAAATATAAATTAAAAGA  600

seq1  CAGAGCCCCACTCTTTGCTGGGATGGTCTCCCAGGCCTTGCTCTGAAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCCCCACTCTTTGCTGGGATGGTCTCCCAGGCCTTGCTCTGAAAGC  650

seq1  CCATTCCACCACAGTGCCTCTGCTCAGAATTGCTTTCTTGCTTCCAGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCCACCACAGTGCCTCTGCTCAGAATTGCTTTCTTGCTTCCAGCAT  700

seq1  AGGCAGACAACCTAAGTCTAGCTTTTAATTTTATCTCTTATTTTTTGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGACAACCTAAGTCTAGCTTTTAATTTTATCTCTTATTTTTTGAGA  750

seq1  ATTTCAAGTGTATGATGCAGCAGATGACGTCACCACACACTTTGGCTATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAGTGTATGATGCAGCAGATGACGTCACCACACACTTTGGCTATA  800

seq1  AGGACATAGAGAAATCAATCTCACACTAACTGGAGAACTTCCTCCTTGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATAGAGAAATCAATCTCACACTAACTGGAGAACTTCCTCCTTGCT  850

seq1  GGCTCGTTTTCACAAGTGCCTGTGGTCTGTGCAGGCTCCTGGTGGGAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCGTTTTCACAAGTGCCTGTGGTCTGTGCAGGCTCCTGGTGGGAAAA  900

seq1  AATAAAGATCTTCTCAGCGCTAGACCTCGCATCCTTCCATGCTGAGCTGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGATCTTCTCAGCGCTAGACCTCGCATCCTTCCATGCTGAGCTGC  950

seq1  CAGGCAATATCTGCCCACTTCTGCCATAGTGGCATGGCTGTTTTCGGGTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAATATCTGCCCACTTCTGCCATAGTGGCATGGCTGTTTTCGGGTA  1000

seq1  ATAAGCCACTTTGATGAGTTTTGAACTCTGTTCTGTTGGAGGAAATGTCA  1050
      ||||||||| |||||||||||||||||||||||||||||||| |||||||
seq2  ATAAGCCAC-TTGATGAGTTTTGAACTCTGTTCTGTTGGAGG-AATGTCA  1048

seq1  TGCCAGGTACTAGAACCTGGTCAAAAGCCCCTGGCCTGGGAGAGCATAT-  1099
      ||||||||||||| ||||| |||||   ||||||||||||||||||||| 
seq2  TGCCAGGTACTAG-ACCTGTTCAAA--GCCCTGGCCTGGGAGAGCATATG  1095

seq1  GCTATTTTTACTAAATG-ATTATGCTGTTAA  1129
      |||| |||||||||||| |||||||||||||
seq2  GCTA-TTTTACTAAATGAATTATGCTGTTAA  1125