BAC Information

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BAC

Clone NameB6Ng01-329C06
Chromosome6 (Build37)
Map Location 128,406,385 - 128,529,794
singlet/doubletdoublet
Overlap geneEG667598, Pzp, LOC384494, EG667610, BC048546
Upstream geneParp11, Efcab4b, Prmt8, Tspan11, Tspan9, LOC100043853, LOC667560, Tead4, LOC652986, Tulp3, 5930416I19Rik, Foxm1, Nrip2, Itfg2, Fkbp4
Downstream geneKlrb1a, EG545878, LOC677440, Clec2h, LOC100043863, LOC100043861, Klrb1c, LOC100043862, Klrb1d, LOC667706, Clec2i, Clec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1, Clec2d, Cd69, 4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik, Gabarapl1, Klre1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329C06.bB6Ng01-329C06.g
ACCGA116198GA116199
length1,0531,134
definitionB6Ng01-329C06.b B6Ng01-329C06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,406,385 - 128,407,439)(128,528,670 - 128,529,794)
sequence
gaattccataaacctcactaggagctccactcccacctcccttgctgagt
ccacgcaggcagaaggcccgtctcttcctgcccacccacaagctgctgag
tccctctgtgagtaaactgttcttgaacatatgtgtttttctcaccccgg
cgtcgaccgaccacttcttctctttgaagtccagccaggcacatgctgga
atggtttgaagaactccttatcagaagcatctctgatactgctttggggg
cagcctccagcttcagatttggtggggagaaaccaaggattaaaatttct
ttagtgtttctgtgggtcaggaatctggactcagtgatggcttttggggt
gtgtcagcgtggtgtggctgaacccttttcctcagaattccctcccaaca
cgtttccaggcagagtgggcgtctacagaacatgctgttggagagagctg
gaggaggggggcagcagctccttttctcccaaactcccaccactcagcaa
acacaaacaaaccttgcttagttctgggtttcaggaacccacttgcagct
tcctgtggttgttttctcatctgcaaccctaacatctgcatccctaacat
ctggggctggagagatgattctgtggctaagaatcactgctctcgtagag
aatcaagttccattcctagcacccacatcttacacctcataactacctgt
aatttgagttccgtgggacctgtcatcctctctgacccccacagacaccc
gcatggatgctggatgcggcacacatacacaaactcaggcacacacatac
acatgaaataagaacaacaaaatctttgacaaccacgtgtctgtctagag
tagagaatgtttcccgggctcctttacatcgccaggtagtaaaggtctga
ccaagcagatgcaagacaagataaagtctgtgcagaaaaataataatttt
tttttccaagacagggcttctctgtgtagccctggctgtcctggaatttg
cttcatagacttggctggcttgagtttacagagatcagcaggattactgg
tgt
gaattcaaagcctcttgcttcaaagcttagctctgttgaccagtgattga
ctcttggcaagtaaattctggtccttgagatataatttcttcatctgtaa
aatgaaagggctagagatgaaaaagcctgtgcattgtatcctgattcata
ttgtctatgacttaaaaaaaaaaaaagaaagaaacaaaagactgaaagta
gaatttattttggcttaaacaatagacacatagacacatacttctggcag
ctgaagaaactgccgatatgaaagtgccgggggttgtttcctccaaagat
tctctgctgtactctgactgatgtgactgtgtctgaggcaggggaattcc
tccaaggagtctgtactgtactataaacggccggcttatgaaggcttctt
tcctttttcttttataattatttttaagtcagctcacaaagcagtgcatt
tcattatgatattttcacatttaatattgcaaagataattcttaaaggga
gatttttacttcctgatactcccttttctgctcttgttaaaatattagaa
taaactgtatattttaaagaaccgacatcttttgtagttctgctaaaata
gcttaattttgctagcattgttctcaaggaaaattatacttgttcatttc
cataaatgtctgacatttatgcttctatggataagtctgtcactaattct
gttccaggctatctcagtctatgtctgatagggtaaaagcttctaagggc
agcattggggacaacaagaatcattaagagaggaataataaatacaagtt
gatattttcccccaatgaactcctaacctgaaaaggtgaaatcagagcta
gagggaaaggaatgtgacgggcaagcttgcccatcttgtgatgggcaagc
aattacttatgtatatatctttaaagcaatcatcgcttataaggtggggg
atcacaagaaattccactttaccagcagtatccccttttcctttagtttc
actttcgcgtgtgacactgaacatctggcctggagctgttgatgacttgg
tgagtccataactgcctaaagtaacagtggagatggaacatgttcatcaa
ggtcctattgctgttacggagcacttccagaacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_128406385_128407439
seq2: B6Ng01-329C06.b_44_1096

seq1  GAATTCCATAAACCTCACTAGGAGCTCCACTCCCACCTCCCTTGCTGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAAACCTCACTAGGAGCTCCACTCCCACCTCCCTTGCTGAGT  50

seq1  CCACGCAGGCAGAAGGCCCGTCTCTTCCTGCCCACCCACAAGCTGCTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGCAGGCAGAAGGCCCGTCTCTTCCTGCCCACCCACAAGCTGCTGAG  100

seq1  TCCCTCTGTGAGTAAACTGTTCTTGAACATATGTGTTTTTCTCACCCCGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTGTGAGTAAACTGTTCTTGAACATATGTGTTTTTCTCACCCCGG  150

seq1  CGTCGACCGACCACTTCTTCTCTTTGAAGTCCAGCCAGGCACATGCTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCGACCGACCACTTCTTCTCTTTGAAGTCCAGCCAGGCACATGCTGGA  200

seq1  ATGGTTTGAAGAACTCCTTATCAGAAGCATCTCTGATACTGCTTTGGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTGAAGAACTCCTTATCAGAAGCATCTCTGATACTGCTTTGGGGG  250

seq1  CAGCCTCCAGCTTCAGATTTGGTGGGGAGAAACCAAGGATTAAAATTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCCAGCTTCAGATTTGGTGGGGAGAAACCAAGGATTAAAATTTCT  300

seq1  TTAGTGTTTCTGTGGGTCAGGAATCTGGACTCAGTGATGGCTTTTGGGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTTTCTGTGGGTCAGGAATCTGGACTCAGTGATGGCTTTTGGGGT  350

seq1  GTGTCAGCGTGGTGTGGCTGAACCCTTTTCCTCAGAATTCCCTCCCAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAGCGTGGTGTGGCTGAACCCTTTTCCTCAGAATTCCCTCCCAACA  400

seq1  CGTTTCCAGGCAGAGTGGGCGTCTACAGAACATGCTGTTGGAGAGAGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTCCAGGCAGAGTGGGCGTCTACAGAACATGCTGTTGGAGAGAGCTG  450

seq1  GAGGAGGGGGGCAGCAGCTCCTTTTCTCCCAAACTCCCACCACTCAGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGGGGGCAGCAGCTCCTTTTCTCCCAAACTCCCACCACTCAGCAA  500

seq1  ACACAAACAAACCTTGCTTAGTTCTGGGTTTCAGGAACCCACTTGCAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAACAAACCTTGCTTAGTTCTGGGTTTCAGGAACCCACTTGCAGCT  550

seq1  TCCTGTGGTTGTTTTCTCATCTGCAACCCTAACATCTGCATCCCTAACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGGTTGTTTTCTCATCTGCAACCCTAACATCTGCATCCCTAACAT  600

seq1  CTGGGGCTGGAGAGATGATTCTGTGGCTAAGAATCACTGCTCTCGTAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGCTGGAGAGATGATTCTGTGGCTAAGAATCACTGCTCTCGTAGAG  650

seq1  AATCAAGTTCCATTCCTAGCACCCACATCTTACACCTCATAACTACCTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAGTTCCATTCCTAGCACCCACATCTTACACCTCATAACTACCTGT  700

seq1  AATTTGAGTTCCGTGGGACCTGTCATCCTCTCTGACCCCCACAGACACCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGAGTTCCGTGGGACCTGTCATCCTCTCTGACCCCCACAGACACCC  750

seq1  GCATGGATGCTGGATGCGGCACACATACACAAACTCAGGCACACACATAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGATGCTGGATGCGGCACACATACACAAACTCAGGCACACACATAC  800

seq1  ACATGAAATAAGAACAACAAAATCTTTGACAACCACGTGTCTGTCTAGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAAATAAGAACAACAAAATCTTTGACAACCACGTGTCTGTCTAGAG  850

seq1  TAGAGAATGTTTCCCGGGCTCCTTTACATCGCCAGGTAGT-AAGGTCTGA  899
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TAGAGAATGTTTCCCGGGCTCCTTTACATCGCCAGGTAGTAAAGGTCTGA  900

seq1  CCAAGCAGATGCAAGACAAGATAAAGTCTGTGCAGAAAAATAATAATTTT  949
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CCAAGCAGATGCAAGACAAGATAAAGTCTGTGCAGAAAAATAATAA-TTT  949

seq1  TTTTTTCCAAGACAGGGCTTCTCTGTGTAGCCCTGGCTGTCCTGGAATTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCCAAGACAGGGCTTCTCTGTGTAGCCCTGGCTGTCCTGGAATTT  999

seq1  GCTTCATAGACTTGGCTGGCCTTGAGTTTACAGAGATCAGCAGGGATTAC  1049
      ||||||||||||||||||| |||||||||||||||||||||| |||||||
seq2  GCTTCATAGACTTGGCTGG-CTTGAGTTTACAGAGATCAGCA-GGATTAC  1047

seq1  TGGTGT  1055
      ||||||
seq2  TGGTGT  1053

seq1: chr6_128528670_128529794
seq2: B6Ng01-329C06.g_64_1197 (reverse)

seq1  CGTTCCTGGAAGGTGCTCTGT-ACAGCAAT-GGA-CTTGATGAACATGTT  47
      |||| |||||| |||||| || |||||||| ||| |||||||||||||||
seq2  CGTT-CTGGAA-GTGCTCCGTAACAGCAATAGGACCTTGATGAACATGTT  48

seq1  TCATCT-CACTGTACCTTTA-GCAGTTATGAACTCACCAAGTCATCAACA  95
       ||||| ||||||  ||||| ||||||||| |||||||||||||||||||
seq2  CCATCTCCACTGTTACTTTAGGCAGTTATGGACTCACCAAGTCATCAACA  98

seq1  GGCTTCA-GCCAGATGTTCAGTGTCACAACGCGAAAGTG-AACT-AAGGA  142
       ||| || ||||||||||||||||||| ||||||||||| |||| |||||
seq2  -GCTCCAGGCCAGATGTTCAGTGTCAC-ACGCGAAAGTGAAACTAAAGGA  146

seq1  AAAGGGGATACTGCT-GTAAAGTGG-ATTTCTTGTGAT-CCCCACCTTAT  189
      ||||||||||||||| ||||||||| |||||||||||| |||||||||||
seq2  AAAGGGGATACTGCTGGTAAAGTGGAATTTCTTGTGATCCCCCACCTTAT  196

seq1  -AGCGATGATTGCTTT-AAGATATATACATAAGTAATTGCTTGCCCATCA  237
       ||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AAGCGATGATTGCTTTAAAGATATATACATAAGTAATTGCTTGCCCATCA  246

seq1  CAAGATGGGCAAGCTTGCCCGTCACATTCCTTTCCCTCTAGCTCTGATTT  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATGGGCAAGCTTGCCCGTCACATTCCTTTCCCTCTAGCTCTGATTT  296

seq1  CACCTTTTCAGGTTAGGAGTTCATTGGGGGAAAATATCAACTTGTATTTA  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTTTCAGGTTAGGAGTTCATTGGGGGAAAATATCAACTTGTATTTA  346

seq1  TTATTCCTCTCTTAATGATTCTTGTTGTCCCCAATGCTGCCCTTAGAAGC  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCCTCTCTTAATGATTCTTGTTGTCCCCAATGCTGCCCTTAGAAGC  396

seq1  TTTTACCCTATCAGACATAGACTGAGATAGCCTGGAACAGAATTAGTGAC  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACCCTATCAGACATAGACTGAGATAGCCTGGAACAGAATTAGTGAC  446

seq1  AGACTTATCCATAGAAGCATAAATGTCAGACATTTATGGAAATGAACAAG  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTATCCATAGAAGCATAAATGTCAGACATTTATGGAAATGAACAAG  496

seq1  TATAATTTTCCTTGAGAACAATGCTAGCAAAATTAAGCTATTTTAGCAGA  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTTTCCTTGAGAACAATGCTAGCAAAATTAAGCTATTTTAGCAGA  546

seq1  ACTACAAAAGATGTCGGTTCTTTAAAATATACAGTTTATTCTAATATTTT  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAAAAGATGTCGGTTCTTTAAAATATACAGTTTATTCTAATATTTT  596

seq1  AACAAGAGCAGAAAAGGGAGTATCAGGAAGTAAAAATCTCCCTTTAAGAA  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGAGCAGAAAAGGGAGTATCAGGAAGTAAAAATCTCCCTTTAAGAA  646

seq1  TTATCTTTGCAATATTAAATGTGAAAATATCATAATGAAATGCACTGCTT  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTTGCAATATTAAATGTGAAAATATCATAATGAAATGCACTGCTT  696

seq1  TGTGAGCTGACTTAAAAATAATTATAAAAGAAAAAGGAAAGAAGCCTTCA  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGCTGACTTAAAAATAATTATAAAAGAAAAAGGAAAGAAGCCTTCA  746

seq1  TAAGCCGGCCGTTTATAGTACAGTACAGACTCCTTGGAGGAATTCCCCTG  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCGGCCGTTTATAGTACAGTACAGACTCCTTGGAGGAATTCCCCTG  796

seq1  CCTCAGACACAGTCACATCAGTCAGAGTACAGCAGAGAATCTTTGGAGGA  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGACACAGTCACATCAGTCAGAGTACAGCAGAGAATCTTTGGAGGA  846

seq1  AACAACCCCCGGCACTTTCATATCGGCAGTTTCTTCAGCTGCCAGAAGTA  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACCCCCGGCACTTTCATATCGGCAGTTTCTTCAGCTGCCAGAAGTA  896

seq1  TGTGTCTATGTGTCTATTGTTTAAGCCAAAATAAATTCTACTTTCAGTCT  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTATGTGTCTATTGTTTAAGCCAAAATAAATTCTACTTTCAGTCT  946

seq1  TTTGTTTCTTTCTTTTTTTTTTTTTAAGTCATAGACAATATGAATCAGGA  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTCTTTCTTTTTTTTTTTTTAAGTCATAGACAATATGAATCAGGA  996

seq1  TACAATGCACAGGCTTTTTCATCTCTAGCCCTTTCATTTTACAGATGAAG  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATGCACAGGCTTTTTCATCTCTAGCCCTTTCATTTTACAGATGAAG  1046

seq1  AAATTATATCTCAAGGACCAGAATTTACTTGCCAAGAGTCAATCACTGGT  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATATCTCAAGGACCAGAATTTACTTGCCAAGAGTCAATCACTGGT  1096

seq1  CAACAGAGCTAAGCTTTGAAGCAAGAGGCTTTGAATTC  1125
      ||||||||||||||||||||||||||||||||||||||
seq2  CAACAGAGCTAAGCTTTGAAGCAAGAGGCTTTGAATTC  1134