MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-331N17
Chromosome	6 (Build37)
Map Location	20,437,993 - 20,439,096
singlet/doublet	singlet
Overlap gene	none
Upstream gene	none
Downstream gene	LOC100040838, Kcnd2, LOC100041343
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100040838 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040838
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	Kcnd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16508 MGI:102663
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041343 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041343
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs

name	Kcnd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51036625 GeneID:16508 MGI:102663
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium voltage-gated channel, Shal-related family, member 2 transcript_id : NM_019697.3

name	LOC100041343 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254881 GeneID:100041343
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs product : similar to pORF2 transcript_id : XM_001476613.1

name	Kcnd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9790093 CCDS:CCDS19934.1 GeneID:16508 MGI:102663
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA] GO_function : GO:0005216 - ion channel activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : potassium channel Kv4.2 product : potassium voltage-gated channel, Shal-related family, member 2 protein_id : NP_062671.1

name	LOC100041343 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254882 GeneID:100041343
definition	codon_start : 1 product : similar to pORF2 protein_id : XP_001476663.1

name	LOC100040838 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040838
definition	number : 1 pseudo : _no_value

name	LOC100040838 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040838
definition	number : 2 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:116589
definition	standard_name : D6Mit346

name	(CDS detail)
type	STS
link
xref	UniSTS:130711
definition	standard_name : D6Mit167

name	(CDS detail)
type	STS
link
xref	UniSTS:130988
definition	standard_name : D6Mit88

name	(CDS detail)
type	STS
link
xref	UniSTS:215319
definition	standard_name : RH132036

name	(CDS detail)
type	STS
link
xref	UniSTS:236042
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:179853
definition	standard_name : AI849020

name	(CDS detail)
type	STS
link
xref	UniSTS:125183
definition	standard_name : MHAa52b4.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:123738
definition	standard_name : 26.MMHAP4FLA5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:185654
definition	standard_name : AW554807

name	(CDS detail)
type	STS
link
xref	UniSTS:179340
definition	standard_name : AI848395

name	(CDS detail)
type	STS
link
xref	UniSTS:130815
definition	standard_name : D6Mit266

name	(CDS detail)
type	STS
link
xref	UniSTS:130858
definition	standard_name : D6Mit306

clone name	MSMg01-137L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066L02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-407I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412J01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-387B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056I19
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-331N17.b	B6Ng01-331N17.g
ACC	GA118118	GA118119
length	1,208	1,105
definition	B6Ng01-331N17.b	B6Ng01-331N17.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattccataaagtccttgttattaatagctgtgtaattacattgtgtaa tgtaccaccttttctgtatctattcctctgctgaagtacatctgggttct ttctagtttctggctcttataaataaggcaaccatgaatataatgaaaca tgtgttgttgttatacatttgagtatcttttgtgtataggcccaggaatg gtatagctgggttcaggattttgctgaacatttctttagtactatgtcta atgttttgtttaagcaccataatgacttccacagtggttgtactagcttg ctattataccaacaatggaggactgttcctctttctctatatcctagcaa gcatctgttgtcacccgaatttttgatcttagccatctgactgctgtgag gtggaatctcaggtttgtgtgatttgcaattccctgataactaagtatgt tgaacattttttttctttttccaattttgcattaggtattttcttcattt acattttaaatgctatcccaaaagtcccctataccctccccgaccctgct cccctacctacccactcccacttcttggcactggtgtttccctgttctgg ggcatataaagtttgcaagaccaaggggcctctcttccaagtgatggcct actaggccatcttctactacatatggagctagagacacgagctctggtgg tactggttagttcatattgttgttccacctatagggttgcagacccctcc agctccttgggtactttctctacctcctccattgggggaactgtgttcca tccagtagttaactgtgagcatcccctcaacagaggaatggatacagaaa atgtggtacatttacacaatggagtactaatctgctaataaaaacaatga atttatgaaatccctagtctaatctgggaaggtttcaccctgagtgaggt aacccaatcataaaagaagtcacatggtatgtactcactgataagtggat attagcccagaaacttaagaaactagaatacattgcaaaaacatgaaact caaaaagacgaagatcaaagtgtggaccactttcacctctctagagactg gaacaaaaactttcaatgcaaggagtaaagagataagtttagactggaaa taaacgatgcaccattcgagaagactgccggcacaccttaaggggcttcc atattcat	gaattcccagcaatcacttggtggataacaaatatctataatgggaattg atgttctctactaactctcaggtttacatgcagatggagagttcatttca ttaaattaatcttaaaaaaataaaaatcactgcaaaagacacagaaactg aaacccaatgtgcatgtgcagtaacccaaaaatcttcagtaaagtaacat agaggaccatattcttaacaaattaaaggtatgtaaagaaatttgaaaat taattaaataaaagtttacctggtaatattgggaagaattctatgccaaa aaaaaaaagaaataaaaagaaaaaactaaagttaccatcaatatgttaaa aatgtaaatactcaaagcctcatttagtcataccttttggcaaaagtttt ctgattacatgccaacaaatgcttcatttttcttcacttcttgatctgag agcaatttcttctccattttacctccgttactttgtctttcctttcctgg atgatagagatcaatttttaggaagattttctagaaatgttgctaataat cacactgttagatattcttattctttaaaatctgaactcctcagcattcg ttagaaattctatctctatactacttttatacaatggagaattttctttg aaaaagtatttattacttcataaagaatatacatatttgtacatacaaaa agaggttttagtgaaatattcaaagacgttatcagttttcttctactatc tctatttagccaggatgggcttattttaatgtgtttctttttccttcaag tgctgtgttttcatactctaacaatgcatcactactgttagctttgcatt gaatggcactgcaccttacattaacatttcattgcttatgcatatcttca acaaagacttgaactaactgaataacaatttctacattttgtgggcatta ttgtaaaggcctaattcacaatttaaaaatagagagagtaaatttggaaa ttcttgtaaaaagaatagtttatggtgccttgatgtgctcatgagtttca aagcacttggtgcctctttctagaggaccatattcactttctacacccat acagt
quality values	Open. Hide. 58 31 14 33 62 62 41 13 62 62 62 62 62 62 62 62 62 62 62 62 47 62 47 47 62 62 62 59 62 62 50 56 50 45 35 34 34 46 59 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 49 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 54 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 58 58 58 49 58 58 58 58 58 58 58 58 58 58 58 58 58 54 52 58 58 58 58 58 54 58 46 58 58 58 58 54 58 47 58 58 54 58 58 58 52 54 42 58 58 58 58 58 58 58 58 58 58 58 54 45 58 54 58 54 58 58 52 58 58 54 58 58 54 58 58 58 54 58 58 58 58 50 50 58 58 58 58 58 58 49 58 51 50 47 50 58 58 51 58 50 58 58 58 58 58 49 51 58 53 58 41 58 54 51 54 58 54 58 50 50 49 48 58 27 44 40 44 38 58 51 54 43 54 58 53 58 51 54 41 39 44 30 49 51 46 49 44 32 58 44 37 58 49 51 50 51 50 28 41 25 44 40 51 50 52 58 35 50 50 47 41 50 50 40 54 51 54 58 58 58 50 51 54 52 58 58 53 47 38 53 53 45 54 39 51 54 45 45 39 49 39 54 44 40 37 46 41 54 44 50 53 53 40 52 51 42 40 52 49 41 41 54 31 51 40 49 39 37 50 32 42 33 42 45 53 37 40 49 47 34 51 42 41 34 34 53 25 54 54 51 49 29 34 31 33 47 46 31 39 40 52 45 54 42 42 33 32 31 49 33 34 52 42 34 26 28 52 42 32 30 33 29 34 30 29 41 35 53 53 46 32 46 41 32 32 31 32 53 40 25 21 42 29 45 31 41 31 33 36 36 33 37 33 31 32 30 30 40 33 31 37 26 45 28 37 24 40 32 25 31 36 31 30 40 31 31 42 10 31 31 32 27 32 41 24 31 31 42 27 27 46 47 46 43 30 41 33 23 19 30 26 34 26 30 46 28 28 37 15 40 29 31 28 25 18 39 24 31 29 31 31 21 27 31 31 31 32 31 36 32 28 30 29 47 48 48 30 32 20 27 37 33 32 27 33 48 31 22 32 31 42 48 31 29 31 44 29 33 31 22 31 31 34 24 25 26 32 30 18 44 17 36 32 24 38 27 48 31 31 13 19 41 20 31 27 20 15 33 24 30 14 32 23 20 14 24 31 26 22 24 34 31 22 28 30 39 48 32 14 33 29 15 32 24 23 28 21 26 11 26 15 18 33 33 30 24 27 34 26 18 22 31 31 19 16 7 17 16 25 18 13 22 15 10 9 15 20 18 27 29 20 18 7 21 29 21 15 24 28 10 20 10 29 38 10 11 5 6 8 13 6 6 7 7 27 13 16 8 18 13 34 47 29 12 5 3 14 14 21 40 23 17 17 16 27 29 47 28 22 7 3 2 7 25 24 8 10 12 13 14 23 14 17 6 10 6 4 14 6 6 5 4 12 23 23 5 6 10 11 22 5 16 15 5 5 6 7 14 4 18 9 13 13 3 3 3 8 9 23 30 17 6 5 5 7 5 22 7 5 16 2 1 3 8 17 13 3 3 5 3 1 4 10 5 8 12 19 9 24 15 13 25 19 4 8 3 3 5 6 6 8 9 5 4 15 15 3 3 3 10 8 8 1 5 13 13 9 6 3 4 5 4 3 4 5 4 5 4 6 10 11 15 5 5 11 4 3 4 15 13 5 10 7 9 22 26 26 1 1 3 6 7 14 5 7 3 2 4 4 7 6	Open. Hide. 62 47 51 47 62 62 62 47 44 38 44 31 21 32 29 34 28 56 59 59 62 59 62 62 59 51 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 42 49 59 62 62 59 59 62 62 62 62 62 62 59 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 59 62 62 59 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 54 62 62 62 62 62 53 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 48 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 54 58 58 58 54 54 46 58 58 49 58 54 58 54 45 41 54 58 58 58 58 58 58 58 54 54 58 58 58 52 54 41 58 58 58 58 58 54 51 58 58 58 49 58 49 58 58 58 51 49 58 54 51 58 58 58 51 58 50 58 54 58 58 58 58 51 51 53 53 42 58 53 58 58 53 49 58 50 44 58 39 53 58 58 51 51 58 58 54 58 58 53 53 50 41 48 51 58 53 51 50 51 58 53 53 58 50 51 53 58 58 40 40 58 53 53 52 54 58 58 58 58 50 51 51 49 51 51 58 58 43 58 50 52 50 50 49 41 58 42 49 58 58 40 58 43 36 58 49 49 50 54 54 54 52 53 54 54 54 51 49 52 40 37 54 54 47 46 47 40 44 54 54 47 38 54 39 54 54 52 54 51 42 42 49 41 44 40 53 53 46 49 42 54 52 33 42 30 53 45 51 31 54 54 54 47 40 52 35 47 34 54 54 36 41 37 47 38 32 54 37 42 45 46 39 40 30 54 40 32 33 33 31 47 33 52 53 45 32 31 32 53 53 34 45 39 53 45 32 31 34 29 31 52 53 45 42 33 32 31 49 34 32 32 31 30 27 45 32 37 25 51 46 32 30 45 31 32 31 51 51 31 26 41 31 41 24 31 28 51 29 32 26 47 47 47 27 27 30 27 45 28 23 31 31 30 40 30 31 41 30 42 29 48 47 31 31 26 31 30 31 31 35 31 31 31 32 28 31 31 43 30 31 33 31 27 31 43 32 42 30 38 24 31 31 31 33 32 48 41 34 36 27 39 31 38 38 30 25 32 27 25 31 31 32 31 30 30 33 35 31 39 31 32 35 37 33 22 22 18 25 27 47 31 26 30 31 20 38 31 31 28 31 29 33 29 31 31 31 38 33 38 31 31 27 21 29 27 48 31 26 37 24 27 33 31 27 27 31 31 22 31 34 25 27 25 30 26 14 20 29 17 19 25 47 32 30 29 34 34 28 37 48 43 29 33 23 25 43 32 17 21 5 6 11 12 25 25 14 30 48 30 12 20 12 28 29 13 10 19 20 32 22 18 16 12 33 48 20 19 43 48 48 7 20 7 11 21 13 28 21 27 16 26 27 40 14 19 34 18 16 24 13 47 13 9 18 28 15 21 24 16 20 47 38 38 27 10 24 13 5 7 7 24 40 11 11 10 14 15 13 14 8 22 11 5 3 3 6 10 4 5 27 4 14 27 16 14 13 8 13 29 17 15 13 26 15 14 12 12 14 14 15 10 8 4 6 5 7 11 6 7 25 8 7 20 20 9 24 9 6 23 11 15 6 9 16 10 24 9 6 8 15 28 21 16 21 10 16 6 14 17 11 3 3 5 16 9 5 2

Alignment Information

BAC End 1

BAC End 2

seq1: chr6_20437993_20439096
seq2: B6Ng01-331N17.g_66_1170

seq1  GAATTCCCAGCAATCACTTGGTGGATAACAAATATCTATAATGGGAATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAGCAATCACTTGGTGGATAACAAATATCTATAATGGGAATTG  50

seq1  ATGTTCTCTACTAACTCTCAGGTTTACATGCAGATGGAGAGTTCATTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTCTACTAACTCTCAGGTTTACATGCAGATGGAGAGTTCATTTCA  100

seq1  TTAAATTAATCTTAAAAAAATAAAAATCACTGCAAAAGACACAGAAACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTAATCTTAAAAAAATAAAAATCACTGCAAAAGACACAGAAACTG  150

seq1  AAACCCAATGTGCATGTGCAGTAACCCAAAAATCTTCAGTAAAGTAACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCAATGTGCATGTGCAGTAACCCAAAAATCTTCAGTAAAGTAACAT  200

seq1  AGAGGACCATATTCTTAACAAATTAAAGGTATGTAAAGAAATTTGAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGACCATATTCTTAACAAATTAAAGGTATGTAAAGAAATTTGAAAAT  250

seq1  TAATTAAATAAAAGTTTACCTGGTAATATTGGGAAGAATTCTATGCCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAATAAAAGTTTACCTGGTAATATTGGGAAGAATTCTATGCCAAA  300

seq1  AAAAAAAAGAAATAAAAAGAAAAAACTAAAGTTACCATCAATATGTTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAGAAATAAAAAGAAAAAACTAAAGTTACCATCAATATGTTAAA  350

seq1  AATGTAAATACTCAAAGCCTCATTTAGTCATACCTTTTGGCAAAAGTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAATACTCAAAGCCTCATTTAGTCATACCTTTTGGCAAAAGTTTT  400

seq1  CTGATTACATGCCAACAAATGCTTCATTTTTCTTCACTTCTTGATCTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTACATGCCAACAAATGCTTCATTTTTCTTCACTTCTTGATCTGAG  450

seq1  AGCAATTTCTTCTCCATTTTACCTCCGTTACTTTGTCTTTCCTTTCCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATTTCTTCTCCATTTTACCTCCGTTACTTTGTCTTTCCTTTCCTGG  500

seq1  ATGATAGAGATCAATTTTTAGGAAGATTTTCTAGAAATGTTGCTAATAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAGAGATCAATTTTTAGGAAGATTTTCTAGAAATGTTGCTAATAAT  550

seq1  CACACTGTTAGATATTCTTATTCTTTAAAATCTGAACTCCTCAGCATTCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGTTAGATATTCTTATTCTTTAAAATCTGAACTCCTCAGCATTCG  600

seq1  TTAGAAATTCTATCTCTATACTACTTTTATACAATGGAGAATTTTCTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAATTCTATCTCTATACTACTTTTATACAATGGAGAATTTTCTTTG  650

seq1  AAAAAGTATTTATTACTTCATAAAGAATATACATATTTGTACATACAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTATTTATTACTTCATAAAGAATATACATATTTGTACATACAAAA  700

seq1  AGAGGTTTTAGTGAAATATTCAAAGACGTTATCAGTTTTCTTCTACTATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTTTTAGTGAAATATTCAAAGACGTTATCAGTTTTCTTCTACTATC  750

seq1  TCTATTTAGCCAGGATGGGCTTATTTTAATGTGTTTCTTTTTCCTTCAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTAGCCAGGATGGGCTTATTTTAATGTGTTTCTTTTTCCTTCAAG  800

seq1  TGCTGTGTTTTCATACTCTAACAATGCATCACTACTGTTAGCTTTGCATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGTTTTCATACTCTAACAATGCATCACTACTGTTAGCTTTGCATT  850

seq1  GAATGGCACTGCACCTTACATTAACATTTCATTGCTTATGCATATCTTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGCACTGCACCTTACATTAACATTTCATTGCTTATGCATATCTTCA  900

seq1  ACAAAGACTTGAACTAACTGAATAACAATTTCTACATTTTGTGGGCAATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ACAAAGACTTGAACTAACTGAATAACAATTTCTACATTTTGTGGGCATTA  950

seq1  TTGTAAAGGCCTAATTCACAATTTAAAAATAGAGAGAGTAAATTTGGAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAAGGCCTAATTCACAATTTAAAAATAGAGAGAGTAAATTTGGAAA  1000

seq1  TTCTTGTAAAAAGATAAGTTTATGGTGCCTGGATGTGCCTCATGAG-TTC  1049
      ||||||||||||||  |||||||||||||| |||||| |||||||| |||
seq2  TTCTTGTAAAAAGAATAGTTTATGGTGCCTTGATGTG-CTCATGAGTTTC  1049

seq1  AAAGCACTTGGTG-CTC-TTCTAGAGGACCCATATTCACTTTCTACACCC  1097
      ||||||||||||| ||| |||||||||| |||||||||||||||||||||
seq2  AAAGCACTTGGTGCCTCTTTCTAGAGGA-CCATATTCACTTTCTACACCC  1098

seq1  ATACAGT  1104
      |||||||
seq2  ATACAGT  1105

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information