BAC Information

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BAC

Clone NameB6Ng01-332K17
Chromosome6 (Build37)
Map Location 26,818,361 - 26,819,231
singlet/doubletsinglet
Overlap genenone
Upstream geneEG626912, LOC100041210
Downstream geneLOC100041247, Grm8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332K17.bB6Ng01-332K17.g
ACCGA118706GA118707
length9541,197
definitionB6Ng01-332K17.b B6Ng01-332K17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tttgttcagttctgagctacattttttaatgggattatttgattttctgg
agtccaccttcttgagttctttatatatatctttatatatataccaatat
atatatctttatatatataccaataggatattagtcccctatatgattta
ggataggtaaaaatcctttcccaatcttgaagacccagaaatgagcccac
acacttatggtcactagatcttcgacaagggagctaaaaccatccagggg
aagaaagacagcattttcaacaaatggtgctggcaaaactggttgttatc
atgtagaagaatgcgaatcgatccattcctatctccttgtactaaggtca
aatctaagtggatcaatgaacttcacataaaaccagagacactgaaactt
gtagaggagaaagtgggggaaaagccttgaagatatgggcacaggggaaa
aattcctgaatagaacagcaatggcttgtgctgtaagatcgagaattgac
aaatgggacctcatgaaactgcaaagcttctgcaaggcaaaagacaccat
caataagacaaaaagaccaccaacagattgcctatttctttagcatggct
taaggtgcctctgctttcctgggagtggtctcttggttgcgtaactgacc
tgaccaagttggaatgttaggtcttcagcatggtgagagtctttttcatg
attaagagttgtgtcttccagacaagtagaccaatggaatagaattgaag
acccagaaatgaacccacacacctatggtcacttgatcttttgacaaggg
agctaaaccatccagtggaagaaaagacagcattttcaacaattggtgtt
ggaacaactggtcgttatcgtgtagaagaatgtgaatcgatccatactta
tctccttgaactaaggtcaaatctaagtggatcaaggaacttcactttaa
acca
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaagatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatttggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtgcaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacatatgctccactat
gttcatagcagccatatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatgaatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaatagaatgaatttatgaaattcctaggcaa
atggatagacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagaatcaatttgctaaacatatgaaactcaag
aagaatgaagactaaagagtggactctatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatcccgggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaatattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgctggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccaaggagctaaagggatctgcaaccct
ataggtggaacacattatgactaccagtaccccggagctcttgactctag
tgcatatgtataaaaagatggctagtcgggcatcactgaggagagcccat
gactgcaactttatatgcccagtacggcatgcaaggctaaggaatgggtt
ggctaggtgatggcgctctcactagacatctctacgatagtatcgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_26818361_26819231
seq2: B6Ng01-332K17.b_139_1010

seq1  TTATATATATACCAATATATATATCTTTATATATATACCAATAGGATATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATATATACCAATATATATATCTTTATATATATACCAATAGGATATT  50

seq1  AGTCCCCTATATGATTTAGGATAGGTAAAAATCCTTTCCCAATCTTGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCCTATATGATTTAGGATAGGTAAAAATCCTTTCCCAATCTTGAAG  100

seq1  ACCCAGAAATGAGCCCACACACTTATGGTCACTAGATCTTCGACAAGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGAAATGAGCCCACACACTTATGGTCACTAGATCTTCGACAAGGGA  150

seq1  GCTAAAACCATCCAGGGGAAGAAAGACAGCATTTTCAACAAATGGTGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAACCATCCAGGGGAAGAAAGACAGCATTTTCAACAAATGGTGCTG  200

seq1  GCAAAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATTCCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATTCCTAT  250

seq1  CTCCTTGTACTAAGGTCAAATCTAAGTGGATCAATGAACTTCACATAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTGTACTAAGGTCAAATCTAAGTGGATCAATGAACTTCACATAAAA  300

seq1  CCAGAGACACTGAAACTTGTAGAGGAGAAAGTGGGGGAAAAGCCTTGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGACACTGAAACTTGTAGAGGAGAAAGTGGGGGAAAAGCCTTGAAG  350

seq1  ATATGGGCACAGGGGAAAAATTCCTGAATAGAACAGCAATGGCTTGTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGGCACAGGGGAAAAATTCCTGAATAGAACAGCAATGGCTTGTGCT  400

seq1  GTAAGATCGAGAATTGACAAATGGGACCTCATGAAACTGCAAAGCTTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGATCGAGAATTGACAAATGGGACCTCATGAAACTGCAAAGCTTCTG  450

seq1  CAAGGCAAAAGACACCATCAATAAGACAAAAAGACCACCAACAGATTGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCAAAAGACACCATCAATAAGACAAAAAGACCACCAACAGATTGCC  500

seq1  TATTTCTTTAGCATGGCTTAAGGTGCCTCTGCTTTCCTGGGAGTGGTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTTTAGCATGGCTTAAGGTGCCTCTGCTTTCCTGGGAGTGGTCTC  550

seq1  TTGGTTGCGTAACTGACCTGACCAAGTTGGAATGTTAGGTCTTCAGCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTGCGTAACTGACCTGACCAAGTTGGAATGTTAGGTCTTCAGCATG  600

seq1  GTGAGAGTCTTTTTCATGATTAAGAGTTGTGTCTTCCAGACAAGTAGACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAGTCTTTTTCATGATTAAGAGTTGTGTCTTCCAGACAAGTAGACC  650

seq1  AATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCAC  700

seq1  TTGATC-TTTGACAAGGGAGCTAAAACCATCCAGTGGAAG-AAAGACAGC  748
      |||||| ||||||||||||||| ||||||||||||||||| |||||||||
seq2  TTGATCTTTTGACAAGGGAGCT-AAACCATCCAGTGGAAGAAAAGACAGC  749

seq1  ATTTTCAACAATTGGTGTTGGCACAACTGGTTGTTATCGTGTAGAAGAAT  798
      ||||||||||||||||||||| ||||||||| ||||||||||||||||||
seq2  ATTTTCAACAATTGGTGTTGGAACAACTGGTCGTTATCGTGTAGAAGAAT  799

seq1  GTGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGA  848
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GTGAATCGATCCATACTTATCTCCTTGAACTAAGGTCAAATCTAAGTGGA  849

seq1  TCAAGGAACTTCACATAAAACCA  871
      |||||||||||||| | ||||||
seq2  TCAAGGAACTTCACTTTAAACCA  872