BAC Information

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BAC

Clone NameB6Ng01-333F14
Chromosome6 (Build37)
Map Location 15,325,082 - 15,325,851
singlet/doubletsinglet
Overlap geneFoxp2
Upstream geneLOC667797, Ppp1r3a, LOC100040568
Downstream geneMdfic, LOC100041116
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-333F14.bB6Ng01-333F14.g
ACCGA119186GA119187
length1,245770
definitionB6Ng01-333F14.b B6Ng01-333F14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctggaaagaagctgtccatataggctgagcaactgattaaaaac
acttaatcacaaaggagagtctaagatgtttcttcttcttcttcttcttc
ttcttcttcttcttcttcttcttattattattattattattattggatat
tttatctatttacatttacattctcttttcccagtttcccctccagaaac
cccttatgccatgccttctccccctgattctatgagggtgccccccaccc
cctgccacctcaacaccctggcgttcccctacactggggagccttcacag
gaccaagggtctctcctcccattgatgcccaacaaggccatcctctgcta
catatgcatctgaagccttgggtctctccatgtgtactctttggttagtc
cctgggggctctggggagtctgtttggttgatactgctgttcttcctatg
gggttgcaaaccccttcagctttttcagtcctttctctaacttgtacact
ggggaccccttatcaatctaatgcttggctgcgagcatacacctctgtat
ttgtcagtctctggcagagcctctcaggagacagctatatcaggctcctg
ttggcaaacacttcttggcatccacaatagtgtctgcatttggtttatgt
atatgagatgggtccccaggtggggcagtctctggatggcctttccttca
ggttctgctccacaatttgtctccatatttcctcccatattttattcccc
cttctaagaaggactgaaggatccacactttaatcttccttcttcttgag
cttcatgtggtctgtgaattgattcttgggtatcctgagcttgataagtg
gctgatatccacttatcagtgagtgcataccatgtgttcttttgtgattg
ggttacttcactcaggatgatattttctagttccatccatttgtctaaaa
gtttatgagtcattgttttaatagctaagtagtacctccattgtgtaaat
gtatcacattttctgtatccattcctctgttgaaggacatcttgtgttgt
ttccagcttctggctatattataaataagctgctatgacaatagtggagc
atggtgttcacacctttacccaatgaatctatctcaattttcttatacat
gtgggacatcttctggaatatgccaggatgtaatgctggcttcagctagg
tctggccgtttcctgagaaccctcgcagcatagtagttctacgag

gaattcttttctttttcattatttccacttatgaccacgttttcattaat
aatttctcattttctattgtcaagtgtcagattagaaaaatatgaactac
attcaaaattactattaaattttgaattttgccaattaatcattttctgt
tttcaaagaaacattatcctgtaaatatgttctaaattgtgtatttatat
aaatattagcttttatttataataaaagtgatttttttccccagaaaaca
aagtgaatattttctgaaaggatgcagtttgactctgtgctgcttggtaa
aaagcaagacccttagcagagcgaccctcactgctctgagcatgtgcctc
tgaggcccaagactttcctgggcttctctgctactctactcctgtttctt
ctttgtatcttttatttctctagaatgttctccctgatactttttcttat
ctagtttcttctcttccttccttttcctctgtatctttctctgtcccata
ttgccttttccctctttcatcctaaaagcttttagaaaatagaataagaa
agtttagaaaaaaattgcttgctgttattgttataatggagaatctttga
gtaatcttcatatttctggactttttaagtataactttggctgtggtgag
aagatgtatctttaaaaactcctatatcgcttactacacatgattattca
tatttatcactgtgtgctatttttatctttttagttatattgtgtgtgtg
tgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_15325082_15325851
seq2: B6Ng01-333F14.g_65_834

seq1  GAATTCTTTTCTTTTTCATTATTTCCACTTATGACCACGTTTTCATTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCTTTTTCATTATTTCCACTTATGACCACGTTTTCATTAAT  50

seq1  AATTTCTCATTTTCTATTGTCAAGTGTCAGATTAGAAAAATATGAACTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTCATTTTCTATTGTCAAGTGTCAGATTAGAAAAATATGAACTAC  100

seq1  ATTCAAAATTACTATTAAATTTTGAATTTTGCCAATTAATCATTTTCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAAATTACTATTAAATTTTGAATTTTGCCAATTAATCATTTTCTGT  150

seq1  TTTCAAAGAAACATTATCCTGTAAATATGTTCTAAATTGTGTATTTATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAGAAACATTATCCTGTAAATATGTTCTAAATTGTGTATTTATAT  200

seq1  AAATATTAGCTTTTATTTATAATAAAAGTGATTTTTTTCCCCAGAAAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTAGCTTTTATTTATAATAAAAGTGATTTTTTTCCCCAGAAAACA  250

seq1  AAGTGAATATTTTCTGAAAGGATGCAGTTTGACTCTGTGCTGCTTGGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAATATTTTCTGAAAGGATGCAGTTTGACTCTGTGCTGCTTGGTAA  300

seq1  AAAGCAAGACCCTTAGCAGAGCGACCCTCACTGCTCTGAGCATGTGCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAGACCCTTAGCAGAGCGACCCTCACTGCTCTGAGCATGTGCCTC  350

seq1  TGAGGCCCAAGACTTTCCTGGGCTTCTCTGCTACTCTACTCCTGTTTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCCCAAGACTTTCCTGGGCTTCTCTGCTACTCTACTCCTGTTTCTT  400

seq1  CTTTGTATCTTTTATTTCTCTAGAATGTTCTCCCTGATACTTTTTCTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTATCTTTTATTTCTCTAGAATGTTCTCCCTGATACTTTTTCTTAT  450

seq1  CTAGTTTCTTCTCTTCCTTCCTTTTCCTCTGTATCTTTCTCTGTCCCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTCTTCTCTTCCTTCCTTTTCCTCTGTATCTTTCTCTGTCCCATA  500

seq1  TTGCCTTTTCCCTCTTTCATCCTAAAAGCTTTTAGAAAATAGAATAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTTTCCCTCTTTCATCCTAAAAGCTTTTAGAAAATAGAATAAGAA  550

seq1  AGTTTAGAAAAAAATTGCTTGCTGTTATTGTTATAATGGAGAATCTTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAGAAAAAAATTGCTTGCTGTTATTGTTATAATGGAGAATCTTTGA  600

seq1  GTAATCTTCATATTTCTGGACTTTTTAAGTATAACTTTGGCTGTGGTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCTTCATATTTCTGGACTTTTTAAGTATAACTTTGGCTGTGGTGAG  650

seq1  AAGATGTATCTTTAAAAACTCCTATATCGCTTACTACACATGATTATTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGTATCTTTAAAAACTCCTATATCGCTTACTACACATGATTATTCA  700

seq1  TATTTATCACTGTGTGCTATTTTTATCTTTTTAGTTATATTGTGTGTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATCACTGTGTGCTATTTTTATCTTTTTAGTTATATTGTGTGTGTG  750

seq1  TGTGTGTGTGTGTGTGTGTG  770
      ||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTG  770


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