MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-333G02
Chromosome	6 (Build37)
Map Location	50,297,463 - 50,420,288
singlet/doublet	doublet
Overlap gene	Osbpl3
Upstream gene	D330028D13Rik, Stk31, LOC384383, LOC666210, Npy, LOC100041653, LOC624524, Mpp6, Dfna5h, LOC100041681
Downstream gene	Cycs, 4921507P07Rik, LOC213320, EG666302, EG666308, EG666310, Npvf, LOC100040877, EG625167, Nfe2l3, Hnrpa2b1
Link	Open Mouse BAC browser

Click to get alignment info.

name	D330028D13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231946 MGI:2442161
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Stk31 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77485 MGI:1924735
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC384383 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384383
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC666210 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666210
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Npy (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109648 MGI:97374
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041653 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041653
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC624524 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:624524
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 13 ESTs

name	Mpp6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56524 MGI:1927340
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dfna5h (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54722 MGI:1889850
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041681 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041681
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Osbpl3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71720 MGI:1918970
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cycs (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13063 MGI:88578
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4921507P07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70821 MGI:1918071
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC213320 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:213320
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins pseudo : _no_value

name	EG666302 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666302 MGI:3644146
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	EG666308 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666308 MGI:3644148
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	EG666310 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666310 MGI:3647078
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Npvf (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:60531 MGI:1926488
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040877 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040877
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	EG625167 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625167 MGI:3643041
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Nfe2l3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18025 MGI:1339958
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hnrpa2b1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53379 MGI:104819
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	D330028D13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375544 GeneID:231946 MGI:2442161
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D330028D13 gene transcript_id : NM_172727.2

name	Stk31 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31044415 GeneID:77485 MGI:1924735
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serine threonine kinase 31 transcript_id : NM_029916.1

name	Npy (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27754168 GeneID:109648 MGI:97374
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neuropeptide Y transcript_id : NM_023456.2

name	LOC100041653 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255152 GeneID:100041653
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041653 transcript_id : XM_001477005.1

name	LOC624524 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94377369 GeneID:624524
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 13 ESTs product : hypothetical LOC624524 transcript_id : XM_898388.2

name	Mpp6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9910473 GeneID:56524 MGI:1927340
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) transcript_id : NM_019939.1

name	Dfna5h (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350022 GeneID:54722 MGI:1889850
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : deafness, autosomal dominant 5 homolog (human) transcript_id : NM_018769.2

name	LOC100041681 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255156 GeneID:100041681
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : hypothetical protein LOC100041681 transcript_id : XM_001477075.1

name	Osbpl3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802870 GeneID:71720 MGI:1918970
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : oxysterol binding protein-like 3 transcript_id : NM_027881.2

name	Cycs (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370730 GeneID:13063 MGI:88578
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome c, somatic transcript_id : NM_007808.4

name	4921507P07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347533 GeneID:70821 MGI:1918071
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4921507P07 gene transcript_id : NM_027564.2

name	Npvf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:11230795 GeneID:60531 MGI:1926488
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neuropeptide VF precursor transcript_id : NM_021892.1

name	EG625167 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94377375 GeneID:625167 MGI:3643041
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : predicted gene, EG625167 transcript_id : XM_898623.2

name	Nfe2l3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754833 GeneID:18025 MGI:1339958
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear factor, erythroid derived 2, like 3 transcript_id : NM_010903.1

name	Hnrpa2b1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109134361 GeneID:53379 MGI:104819
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heterogeneous nuclear ribonucleoprotein A2/B1 transcript_id : NM_016806.2

name	Hnrpa2b1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109134360 GeneID:53379 MGI:104819
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heterogeneous nuclear ribonucleoprotein A2/B1 transcript_id : NM_182650.3

name	D330028D13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370060 CCDS:CCDS20126.1 GeneID:231946 MGI:2442161
definition	codon_start : 1 product : hypothetical protein LOC231946 protein_id : NP_766315.1

name	Stk31 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31044416 GeneID:77485 MGI:1924735
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : serine threonine kinase 31 protein_id : NP_084192.1

name	Npy (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963683 GeneID:109648 MGI:97374
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0001664 - G-protein-coupled receptor binding [Evidence IDA] [Evidence IGI]; GO:0005179 - hormone activity [Evidence IEA] GO_process : GO:0008217 - blood pressure regulation [Evidence IDA]; GO:0007218 - neuropeptide signaling pathway [Evidence IEA] codon_start : 1 product : neuropeptide Y protein_id : NP_075945.1

name	LOC100041653 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255153 GeneID:100041653
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477055.1

name	LOC624524 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82901024 GeneID:624524
definition	codon_start : 1 product : hypothetical protein protein_id : XP_903481.1

name	Mpp6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910474 CCDS:CCDS20128.1 GeneID:56524 MGI:1927340
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0004385 - guanylate kinase activity [Evidence ISS]; GO:0030165 - PDZ domain binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IEA]; GO:0008022 - protein C-terminus binding [Evidence IPI] codon_start : 1 exception : mismatches in translation product : membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 6) protein_id : NP_064323.1

name	Dfna5h (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9055204 CCDS:CCDS20130.1 GeneID:54722 MGI:1889850
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0035315 - hair cell differentiation [Evidence IMP]; GO:0007605 - sensory perception of sound [Evidence ISS] codon_start : 1 note : nonsyndromic hearing impairment protein product : deafness, autosomal dominant 5 protein protein_id : NP_061239.1

name	LOC100041681 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255157 GeneID:100041681
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477125.1

name	Osbpl3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21687076 GeneID:71720 MGI:1918970
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA] GO_process : GO:0006869 - lipid transport [Evidence IEA]; GO:0008202 - steroid metabolism [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : oxysterol-binding protein-related protein 3 product : oxysterol-binding protein-like protein 3 protein_id : NP_082157.1

name	Cycs (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681095 CCDS:CCDS20131.1 GeneID:13063 MGI:88578
definition	GO_component : GO:0005829 - cytosol [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA]; GO:0005625 - soluble fraction [Evidence IDA] GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0008635 - caspase activation via cytochrome c [Evidence IMP]; GO:0043065 - positive regulation of apoptosis [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : cytochrome c, somatic protein_id : NP_031834.1

name	4921507P07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21389313 CCDS:CCDS20132.1 GeneID:70821 MGI:1918071
definition	codon_start : 1 product : hypothetical protein LOC70821 protein_id : NP_081840.1

name	Npvf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11230796 CCDS:CCDS20133.1 GeneID:60531 MGI:1926488
definition	GO_process : GO:0007218 - neuropeptide signaling pathway [Evidence IEA] codon_start : 1 note : RFamide related peptide product : RFamide-related peptide protein_id : NP_068692.1

name	EG625167 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82901034 GeneID:625167 MGI:3643041
definition	codon_start : 1 product : hypothetical protein protein_id : XP_903716.1

name	Nfe2l3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754834 CCDS:CCDS20134.1 GeneID:18025 MGI:1339958
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : nuclear factor, erythroid derived 2, like 3 protein_id : NP_035033.1

name	Hnrpa2b1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32880197 GeneID:53379 MGI:104819
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence ISS] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence ISS]; GO:0006396 - RNA processing [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; hnRNP A2/B1; heterogenous nuclear ribonucleoprotein A2/B1 product : heterogeneous nuclear ribonucleoprotein A2/B1 isoform 2 protein_id : NP_872591.1

name	Hnrpa2b1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:109134362 GeneID:53379 MGI:104819
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence ISS] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence ISS]; GO:0006396 - RNA processing [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; hnRNP A2/B1; heterogenous nuclear ribonucleoprotein A2/B1 product : heterogeneous nuclear ribonucleoprotein A2/B1 isoform 1 protein_id : NP_058086.2

name	LOC384383 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384383
definition	number : 1 pseudo : _no_value

name	LOC666210 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666210
definition	number : 1 pseudo : _no_value

name	LOC666210 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666210
definition	number : 2 pseudo : _no_value

name	LOC666210 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666210
definition	number : 3 pseudo : _no_value

name	LOC666210 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666210
definition	number : 4 pseudo : _no_value

name	EG666302 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666302
definition	number : 1 pseudo : _no_value

name	EG666308 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666308
definition	number : 1 pseudo : _no_value

name	EG666310 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666310
definition	number : 2 pseudo : _no_value

name	EG666310 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666310
definition	number : 1 pseudo : _no_value

name	LOC100040877 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040877
definition	number : 3 pseudo : _no_value

name	LOC100040877 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040877
definition	number : 2 pseudo : _no_value

name	LOC100040877 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040877
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:235442
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:224939
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:144064
definition	standard_name : Npy

name	(CDS detail)
type	STS
link
xref	UniSTS:109716
definition	standard_name : AU048256

name	(CDS detail)
type	STS
link
xref	UniSTS:216875
definition	standard_name : RH133592

name	(CDS detail)
type	STS
link
xref	UniSTS:123302
definition	standard_name : 16.MMHAP31FLF1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:143111
definition	standard_name : Fin15

name	(CDS detail)
type	STS
link
xref	UniSTS:163384
definition	standard_name : U42384

name	(CDS detail)
type	STS
link
xref	UniSTS:207954
definition	standard_name : BB219592

name	(CDS detail)
type	STS
link
xref	UniSTS:124448
definition	standard_name : 42.MHAa90d6.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:179371
definition	standard_name : X01756

name	(CDS detail)
type	STS
link
xref	UniSTS:130823
definition	standard_name : D6Mit276

name	(CDS detail)
type	STS
link
xref	UniSTS:124095
definition	standard_name : 34.MMHAP57FLD4.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130660
definition	standard_name : D6Mit119

name	(CDS detail)
type	STS
link
xref	UniSTS:116607
definition	standard_name : D6Mit33

name	(CDS detail)
type	STS
link
xref	UniSTS:130788
definition	standard_name : D6Mit240

name	(CDS detail)
type	STS
link
xref	UniSTS:130789
definition	standard_name : D6Mit240.1

name	(CDS detail)
type	STS
link
xref	UniSTS:130822
definition	standard_name : D6Mit275

name	(CDS detail)
type	STS
link
xref	UniSTS:110956
definition	standard_name : AU046983

name	(CDS detail)
type	STS
link
xref	UniSTS:163385
definition	standard_name : AB013852

name	LOC213320 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255130 GeneID:213320
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins product : similar to crooked neck-like 1 protein pseudo : _no_value transcript_id : XR_032186.1

clone name	MSMg01-400J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352O02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-341K09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-468H24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-491I03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-059B03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-136G19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-291G03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-418M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136I19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-138I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346J19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-117K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206I13
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-333G02.b	B6Ng01-333G02.g
ACC	GA119210	GA119211
length	1,064	1,080
definition	B6Ng01-333G02.b	B6Ng01-333G02.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(50,419,238 - 50,420,288)	(50,297,463 - 50,298,545)
sequence	gaattcagttcagcaaacttagtggcaagggcctttacccttatcatcag tgacatcatctaactggctttcttccattcttcacatgagaagatgagat tcagaaatgttaagttcaagggcattatagtacttttcttagatttattt atttttttatcttgtgtgtctgtatttctatatgctcacacatacctagg tgcacatacggaggtcagaggaaaacttgaggaaattggttctatctttc cactatgtggaaagaagggtagggtttaaactcaggtcatcaggcctgac agaaagtgcctttgccactggaccagctctctggcccatggccaatgatg ggaccagtattaaaaagggcatttttcaacgttggcatctttggcagtat aggtgagtaattgtggggaaagcatggtgggatgtttagcaacatccacc ctcatacctctccccccaatatttgtatcccacgttgcctcctatggggg caaaagtgaccttatgtagcgacatactttttaaagctagtctttctgac tccaaagcccttgaacatccacaactgtgttgccactcacacataccata tactttattttaagcaaagatgcagaggtacagtgggtagggccaggcat gacaggagacgctcagtatagagttcatggtcagcacccaccccatacaa ataacaaaaaagagaaatgcaagcaagctctctctctctttttaaaaatt aagtcatatagtattatcagaaattggattcaacctaactatgaattctg tccctttttgcctgtcactatattgtgattcttctttggaattttttatt tatttttattgttttaggatcctcaactaggcctattcactcccacactc aatgttcccacttgtttcccttcctctccctaaactttagtcataaatct tgttaaaactaggcaatggtgtgtctgagccaacaggccaagatctcttg gaatgccccttgtggatattcccttgtggtgttgttgacaataccagatc ctcagttttcagta	gaattctgctttgatagactgctacgctgttcacggatgacaagaggagg ttagacatcaaaacagagccaggcagggacagcttccaagagggaaggaa ggataggatagcggggtgagcaaaataccccacaggagatttgggtactt ctggccaccaccccagctaagccacactatgctccatggccctaggcagc agtccttattttcttctatgaaatgatgccgccacagtaaagatactttg gggaacagtccgcaatcctatgaggctgtacgcaggcttagctgcatccg acaggcaggtaggaaaaacctgtcagtgtggctgagagaaagcctaagcc ttcaggtcactccttacctgagctcctgccttgatccgtgctcgctgtat cctggatctgatactggtcaagagactaactgggtaccaacctccaacct accctgctccaccgacaaaccttccctcagacttactcctggcaacacaa tcattaccttcctactggaaactgactcgaacactcctggggcagaatct gtgacagaggaccctgagaaaaagtgattgacatcccggggaaacatggc gatctcattctgccggtacattctgtggtgacggagcttggacacccact cgtcaaagagttcttctgacttcacctgcagggcaggggttaaattgaga gacggagaagagagccactggctaagacgggatcagttattcatcaaaac gatgcctcttttgatctgctctttttgagctagtatgcatgaaaaataag aaactgcatgtactgtcttggtttcatttatgtggtctcggaggacactc aaagaagaggaactgtcacaaagtacaatactcatgtctcctttgagatg ttttaaccactatgcaacttctagaatgcaacagggctagtttttattag cacaaataaactgaacctcacatttatctctaaatatttccagttcctct tgcctagactggcccactccctacctgaaagaaaaatatcagctctgttc ttcatgtaatgctgtagtcaaacatcacga
quality values	Open. Hide. 62 47 23 33 62 37 26 41 62 62 37 37 47 62 56 62 62 62 62 62 44 62 62 62 59 59 62 59 62 62 59 62 62 62 62 54 62 62 62 62 62 62 62 62 59 59 62 59 59 62 62 62 59 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 54 49 54 59 59 62 62 62 62 62 59 62 62 59 62 62 54 54 54 62 62 54 54 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 54 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 54 54 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 59 59 59 59 62 62 59 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 59 59 59 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 56 56 45 35 51 59 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 56 56 51 56 56 56 56 56 56 62 62 62 62 51 47 62 28 47 56 54 56 62 62 44 51 56 56 56 62 56 54 26 37 51 56 51 50 36 56 50 56 62 62 62 56 54 62 62 42 47 47 37 56 47 47 56 62 56 62 62 62 62 62 47 62 62 62 56 56 54 62 62 62 62 62 62 62 42 56 62 56 41 43 56 62 43 56 42 47 62 62 56 47 24 62 37 47 62 52 46 42 42 47 62 52 54 26 62 47 29 47 52 52 46 30 47 48 52 43 52 42 52 62 62 42 62 33 26 49 50 24 22 6 8 18 28 42 23 52 32 41 39 42 52 52 54 52 30 39 15 22 33 35 41 54 52 46 50 54 48 52 42 54 52 39 38 22 39 46 29 47 19 7 33 36 22 25 52 22 42 10 15 42 23 31 40 30 14 17 26 22 6 14 35 32 58 50 39 38 37 42 46 42 36 39 22 52 51 50 28 13 51 58 49 42 18 51 21 38 34 29 39 26 37 33 39 34 10 25 39 39 20 21 46 30 25 12 50 50 9 23 46 39 9 7 30 32 28 15 30 24 16 19 36 39 39 26 32 50 40 47 26 18 50 41 40 53 40 29 27 20 22 53 52 50 37 28 12 33 24 50 34 20 26 35 21 36 43 24 21 19 54 19 39 47 22 21 29 7 10 18 53 27 21 49 34 29 35 25 54 39 44 42 10 7 11 35 28 23 29 27 44 26 27 51 34 25 51 13 49 51 7 6 9 34 39 31 14 17 16 13 7 12 24 25 44 7 28 23 30 11 12 11 43 37 22 49 20 19 40 33 30 40 32 33 28 14 6 14 15 42 14 18 30 45 7 14 29 19 26 31 8 13 18 9 17 21 24 6 19 24 29 42 21 22 40 25 7 27 40 9 11 29 29 15 8 9 7 23 15 27 31 39 16 18 26 36 6 10 8 5 15 26 26 9 8 17 30 19 32 12 8 21 19 9 19 11 21 19 21 14 30 23 9 20 13 37 27 16 16 27 15 6 14 23 29 12 21 11 46 23 17 9 8 12 9 12 28 9 17 6 9 31 48 46 9 7 10 13 11 31 16 11 7 19 8 10 17 35 26 9 6 6 6 8 5 6 10 11 21 5 5 14 20 11 10 16 30 32 19 17 8 5 6 14 44 16 13 15 23 28 8 31 43 15 10 14 13 10 6 13	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr6_50419238_50420288
seq2: B6Ng01-333G02.b_50_1113 (reverse)

seq1  TACTGGAAAAATGAGAATCT-GTATTGTCAACA--AACACACAGGGATAT  47
      |||| ||||| |||| |||| ||||||||||||  | ||||  || ||||
seq2  TACT-GAAAACTGAGGATCTGGTATTGTCAACAACACCACAAGGGAATAT  49

seq1  CCAC-AGGGGCA-TCCCAGAGATCTTGGCCTTGTTGGCTCAGACACA-CA  94
      |||| ||||||| ||| ||||||||||||| |||||||||||||||| ||
seq2  CCACAAGGGGCATTCCAAGAGATCTTGGCC-TGTTGGCTCAGACACACCA  98

seq1  TTGCCTAGTTTTAACAAGA-TTATGAC-AAAGTTTAGGGAGAGGA--GGA  140
      ||||||||||||||||||| ||||||| |||||||||||||||||  |||
seq2  TTGCCTAGTTTTAACAAGATTTATGACTAAAGTTTAGGGAGAGGAAGGGA  148

seq1  AACAAGTGG--ACATTGAGTGTGGGAGTGAATAGGCCTAG-TGAGGATCC  187
      |||||||||  ||||||||||||||||||||||||||||| |||||||||
seq2  AACAAGTGGGAACATTGAGTGTGGGAGTGAATAGGCCTAGTTGAGGATCC  198

seq1  TAAAACAATAAAAATAAATAAAAAATTCCAAAG-AGAATCACAATATAGT  236
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TAAAACAATAAAAATAAATAAAAAATTCCAAAGAAGAATCACAATATAGT  248

seq1  GACAGGC-AAAAGGGACAGAATTCATAGTTAGGTTGAATCCAATTTCTGA  285
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGCAAAAAGGGACAGAATTCATAGTTAGGTTGAATCCAATTTCTGA  298

seq1  TAATACTATATGACTTAATTTTTAAAAAGAGAGAGAGAGCTTGCTTGCAT  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACTATATGACTTAATTTTTAAAAAGAGAGAGAGAGCTTGCTTGCAT  348

seq1  TTCTCTTTTTTGTTATTTGTATGGGGTGGGTGCTGACCATGAACTCTATA  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTTTTTGTTATTTGTATGGGGTGGGTGCTGACCATGAACTCTATA  398

seq1  CTGAGCGTCTCCTGTCATGCCTGGCCCTACCCACTGTACCTCTGCATCTT  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCGTCTCCTGTCATGCCTGGCCCTACCCACTGTACCTCTGCATCTT  448

seq1  TGCTTAAAATAAAGTATATGGTATGTGTGAGTGGCAACACAGTTGTGGAT  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAAAATAAAGTATATGGTATGTGTGAGTGGCAACACAGTTGTGGAT  498

seq1  GTTCAAGGGCTTTGGAGTCAGAAAGACTAGCTTTAAAAAGTATGTCGCTA  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAGGGCTTTGGAGTCAGAAAGACTAGCTTTAAAAAGTATGTCGCTA  548

seq1  CATAAGGTCACTTTTGCCCCCATAGGAGGCAACGTGGGATACAAATATTG  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGGTCACTTTTGCCCCCATAGGAGGCAACGTGGGATACAAATATTG  598

seq1  GGGGGAGAGGTATGAGGGTGGATGTTGCTAAACATCCCACCATGCTTTCC  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAGAGGTATGAGGGTGGATGTTGCTAAACATCCCACCATGCTTTCC  648

seq1  CCACAATTACTCACCTATACTGCCAAAGATGCCAACGTTGAAAAATGCCC  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAATTACTCACCTATACTGCCAAAGATGCCAACGTTGAAAAATGCCC  698

seq1  TTTTTAATACTGGTCCCATCATTGGCCATGGGCCAGAGAGCTGGTCCAGT  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATACTGGTCCCATCATTGGCCATGGGCCAGAGAGCTGGTCCAGT  748

seq1  GGCAAAGGCACTTTCTGTCAGGCCTGATGACCTGAGTTTAAACCCTACCC  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAGGCACTTTCTGTCAGGCCTGATGACCTGAGTTTAAACCCTACCC  798

seq1  TTCTTTCCACATAGTGGAAAGATAGAACCAATTTCCTCAAGTTTTCCTCT  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCCACATAGTGGAAAGATAGAACCAATTTCCTCAAGTTTTCCTCT  848

seq1  GACCTCCGTATGTGCACCTAGGTATGTGTGAGCATATAGAAATACAGACA  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCCGTATGTGCACCTAGGTATGTGTGAGCATATAGAAATACAGACA  898

seq1  CACAAGATAAAAAAATAAATAAATCTAAGAAAAGTACTATAATGCCCTTG  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGATAAAAAAATAAATAAATCTAAGAAAAGTACTATAATGCCCTTG  948

seq1  AACTTAACATTTCTGAATCTCATCTTCTCATGTGAAGAATGGAAGAAAGC  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAACATTTCTGAATCTCATCTTCTCATGTGAAGAATGGAAGAAAGC  998

seq1  CAGTTAGATGATGTCACTGATGATAAGGGTAAAGGCCCTTGCCACTAAGT  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAGATGATGTCACTGATGATAAGGGTAAAGGCCCTTGCCACTAAGT  1048

seq1  TTGCTGAACTGAATTC  1051
      ||||||||||||||||
seq2  TTGCTGAACTGAATTC  1064

seq1: chr6_50297463_50298545
seq2: B6Ng01-333G02.g_66_1145

seq1  GAATTCTGCTTTGATAGACTGCTACGCTGTTCACGGATGACAAGAGGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCTTTGATAGACTGCTACGCTGTTCACGGATGACAAGAGGAGG  50

seq1  TTAGACATCAAAACAGAGCCAGGCAGGGACAGCTTCCAAGAGGGAAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACATCAAAACAGAGCCAGGCAGGGACAGCTTCCAAGAGGGAAGGAA  100

seq1  GGATAGGATAGCGGGGTGAGCAAAATACCCCACAGGAGATTTGGGTACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGGATAGCGGGGTGAGCAAAATACCCCACAGGAGATTTGGGTACTT  150

seq1  CTGGCCACCACCCCAGCTAAGCCACACTATGCTCCATGGCCCTAGGCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCACCACCCCAGCTAAGCCACACTATGCTCCATGGCCCTAGGCAGC  200

seq1  AGTCCTTATTTTCTTCTATGAAATGATGCCGCCACAGTAAAGATACTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTTATTTTCTTCTATGAAATGATGCCGCCACAGTAAAGATACTTTG  250

seq1  GGGAACAGTCCGCAATCCTATGAGGCTGTACGCAGGCTTAGCTGCATCCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACAGTCCGCAATCCTATGAGGCTGTACGCAGGCTTAGCTGCATCCG  300

seq1  ACAGGCAGGTAGGAAAAACCTGTCAGTGTGGCTGAGAGAAAGCCTAAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCAGGTAGGAAAAACCTGTCAGTGTGGCTGAGAGAAAGCCTAAGCC  350

seq1  TTCAGGTCACTCCTTACCTGAGCTCCTGCCTTGATCCGTGCTCGCTGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGTCACTCCTTACCTGAGCTCCTGCCTTGATCCGTGCTCGCTGTAT  400

seq1  CCTGGATCTGATACTGGTCAAGAGACTAACTGGGTACCAACCTCCAACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGATCTGATACTGGTCAAGAGACTAACTGGGTACCAACCTCCAACCT  450

seq1  ACCCTGCTCCACCGACAAACCTTCCCTCAGACTTACTCCTGGCAACACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGCTCCACCGACAAACCTTCCCTCAGACTTACTCCTGGCAACACAA  500

seq1  TCATTACCTTCCTACTGGAAACTGACTCGAACACTCCTGGGGCAGAATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTACCTTCCTACTGGAAACTGACTCGAACACTCCTGGGGCAGAATCT  550

seq1  GTGACAGAGGACCCTGAGAAAAAGTGATTGACATCCCGGGGAAACATGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAGAGGACCCTGAGAAAAAGTGATTGACATCCCGGGGAAACATGGC  600

seq1  GATCTCATTCTGCCGGTACATTCTGTGGTGACGGAGCTTGGACACCCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCATTCTGCCGGTACATTCTGTGGTGACGGAGCTTGGACACCCACT  650

seq1  CGTCAAAGAGTTCTTCTGACTTCACCTGCAGGGCAGGGGTTAAATTGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCAAAGAGTTCTTCTGACTTCACCTGCAGGGCAGGGGTTAAATTGAGA  700

seq1  GACGGAGAAGAGAGCCACTGGCTAAGACGGGATCAGTTATTCATCAAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGAGAAGAGAGCCACTGGCTAAGACGGGATCAGTTATTCATCAAAAC  750

seq1  GATGCCTCTTTTGATCTGCTCTTTTTGAGCTAGTATGCATGAAAAATAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCTCTTTTGATCTGCTCTTTTTGAGCTAGTATGCATGAAAAATAAG  800

seq1  AAACTGCATGTACTGTCTTGGTTTCATTTATGTGGTCTCGGAGGACACTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCATGTACTGTCTTGGTTTCATTTATGTGGTCTCGGAGGACACTC  850

seq1  AAAGAAGAGGAACTGTCACAAAGTAC-ATACTCATGTCTCCTTTGAGATG  899
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AAAGAAGAGGAACTGTCACAAAGTACAATACTCATGTCTCCTTTGAGATG  900

seq1  TTTTAACCACTATGCAACTTCTAAGAATGCAAACAGGGCTAGTTTTTATT  949
      |||||||||||||||||||||| ||||||| |||||||||||||||||||
seq2  TTTTAACCACTATGCAACTTCT-AGAATGC-AACAGGGCTAGTTTTTATT  948

seq1  AAGCCACAAATAAACTGAACCTCACATTTATCTCTTAAAATATTTCCAAG  999
      |   |||||||||||||||||||||||||||||||  |||||||||||  
seq2  A--GCACAAATAAACTGAACCTCACATTTATCTCT--AAATATTTCCAGT  994

seq1  TTCTCTTGCCTAAGACTTGCCCACTCCCTA-CTG-----AAAATATCAGC  1043
      | ||||||||| ||||| |||||||||||| |||     |||||||||||
seq2  TCCTCTTGCCT-AGACTGGCCCACTCCCTACCTGAAAGAAAAATATCAGC  1043

seq1  TCTGTTCTTCATGTAAATGCCTGTAGTTCAAACTTCACGA  1083
      |||||||||||||| |||| |||||| |||||| ||||||
seq2  TCTGTTCTTCATGT-AATG-CTGTAG-TCAAACATCACGA  1080

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information