BAC Information

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BAC

Clone NameB6Ng01-334A17
Chromosome6 (Build37)
Map Location 127,605,743 - 127,606,051
singlet/doubletsinglet
Overlap genenone
Upstream geneKcna6, LOC667463, Ndufa9, Akap3, Dyrk4, Rad51ap1, D6Wsu163e, LOC667473, LOC624256, Fgf6, Fgf23, 9630033F20Rik, Ccnd2, Tpi-rs11, EG243642, LOC100043578, EG640703, LOC100043848, Parp11, Efcab4b
Downstream genePrmt8, Tspan11, Tspan9, LOC100043853, LOC667560, Tead4, LOC652986, Tulp3, 5930416I19Rik, Foxm1, Nrip2, Itfg2, Fkbp4, EG667598, Pzp, LOC384494, EG667610, BC048546, Klrb1a, EG545878, LOC677440
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334A17.bB6Ng01-334A17.g
ACCGA119647GA119648
length3091,211
definitionB6Ng01-334A17.b B6Ng01-334A17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
agtacctgaataaatgtcggggcaggaccccagtaccctctcactctctt
ttgttgaaactactttcaagacatccctaaccaatttaaatataccgagg
gatcgaagcatatttaaagtatcaaagaatactaaaatatttctatccaa
taacccaaaggtgtgtggaggaggagtttgaaaaggaggaggagcagagg
gaggaggggaggggatggcaggctttggaaagagcacagaggaagtggga
gaatgggacaaaggcagtattcacccttgagtatggtttaggactcttga
tgaccatca
gaattccttacaaccccatgggacaaggaatagttgaacgtgctcatcgc
accttaaagaattggctttttaagacaaaagagggtcagctatatccccc
aaggtcaccaaaggcccaccttgccttcactttatttgtcctaaatttct
tgcacaccgatatcaagggccagtcagcagcggatcgccactggcatcca
gttacttctaattcttatgcattggtaaaatggaaagaccccctgactaa
tgaatggaagggtccagatccagttctaatttggggtaggggctcagttt
gtgttttttcatgagatgaagatggagcgcggtggctgccagagagatta
attcgtcagatgaacacagattctgactcttctggtaagtatcattctaa
agactaaaattccttttgtgcttaaaattcagctgagagcaacagctctc
aaagctgttctccagctactctctgaaccagctcccgacaggaggccgga
gactagcctcagctttacaatttgcatttgaataaagtacctagacttcc
cggaaagaagttctgctttcctactttctcactgtctttcaagattttgt
ctttcaagcaggtaaatcaacattcccgaggcggaccagtggatgtgcat
ccccgcccccctagagcacacaggtggcagctgttacccccagtctcagg
acatttccagcatgtggctttcagtctgagttaaaaatttaggtttacct
agagggctagaagagtagatttttctatattaataaagattggtttttat
tttgatagacaggcttagccccttagctgacctctggcttttcacccttg
ctgttactgcaaggtgtccttagctcaataggctgtggaaaaaacaggga
tgaggaggaacgacttccagctcctattttagccacaaatcgtggtgtta
ctaacgacataattcttgcttaggctttgctaatcctgagttgataattc
tcctttaggagctgcacagcactcagaactgtgcaatactggtttgtgat
gtacaaattcagtaatgggcatcgcttggtgcaagaagagctactgcagg
ggaagtccagccttgaaccaattctgagttccttgtgagaataacccggt
ttaaagaggttgatcatatttggcttaattagatttttcggtcttaatcc
tggctttcccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_127605743_127606051
seq2: B6Ng01-334A17.b_57_365 (reverse)

seq1  TGATGGTCATCAAGAGTCCTAGACCCTTCTCAAGGGTGAATACTGCCTTT  50
      ||||||||||||||||||||| ||| | ||||||||||||||||||||||
seq2  TGATGGTCATCAAGAGTCCTAAACCATACTCAAGGGTGAATACTGCCTTT  50

seq1  GTCCCATTCTCCCACTTCCTCTCTGCTCTTTCCACTGCCTGCCATCCCCT  100
      |||||||||||||||||||||| |||||||||||  ||||||||||||||
seq2  GTCCCATTCTCCCACTTCCTCTGTGCTCTTTCCAAAGCCTGCCATCCCCT  100

seq1  CCCCTCCTCCCTCTGCTCCTCCTCCTTTTCAAACTCCTCCTCCACACACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCTCCCTCTGCTCCTCCTCCTTTTCAAACTCCTCCTCCACACACC  150

seq1  TTTGGGTTATTGGATAGAAATATTTTAGTATTCTTTGATACTTTAAATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGTTATTGGATAGAAATATTTTAGTATTCTTTGATACTTTAAATAT  200

seq1  GCTTCGATCCCTCGGTATATTTAAATTGGTTAGGGATGTCTTGAAAGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCGATCCCTCGGTATATTTAAATTGGTTAGGGATGTCTTGAAAGTAG  250

seq1  TTTCAACAAAAGAGAGTGAGAGGGTACTGGGGTCCTGCCCCGACATTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAACAAAAGAGAGTGAGAGGGTACTGGGGTCCTGCCCCGACATTTAT  300

seq1  TCAGGTACT  309
      |||||||||
seq2  TCAGGTACT  309