BAC Information

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BAC

Clone NameB6Ng01-334I11
Chromosome6 (Build37)
Map Location 129,842,598 - 129,843,777
singlet/doubletsinglet
Overlap genenone
Upstream geneClec2i, Clec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1, Clec2d, Cd69, 4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik, Gabarapl1, Klre1, Klrd1, Klrk1, Klrc3, Klrc2, Klrc1, LOC640755, Klri1, Klri2, Gm156, Klra17
Downstream geneKlra5, LOC667764, Klra6, LOC100038893, LOC100038894, LOC100038895, Klra4, LOC667769, LOC100038897, Klra8, EG654449, Klra9, Klra7, LOC100038898, Klra12, Klra10, Klra13, Klra3, Klra1, LOC100038902, LOC100038903, LOC625436, EG625473, LOC640779, LOC667793, EG667798, EG625558, LOC625566, EG636947
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334I11.bB6Ng01-334I11.g
ACCGA120011GA120012
length1,1681,094
definitionB6Ng01-334I11.b B6Ng01-334I11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgtatatattcgatattaggtctctatcagatttagtgttggt
aaagatcttttcccaatctgttggttgcctttttgtcttattgacagtgt
cttttgccttacagaagctttacaattttatgaggtcttatttgacaaca
cttgatgttatcacatgcacagttggtgttctgttcaggatttttttctg
ctgtgtacttgtatttgagagctttcctcattttctcttctattattttc
aacatcccttcatggtaaaaatctttgaaagattaggactccaaggtcca
tacagaaacatagtaaaaacaataaacatcaaatcagtcaccaacatcaa
actaaatggaaagaaacttgaagcaatcccactaaaatcaggaactagac
aaagctgcccactctttctctacctatttaatatagtacttgaatcccaa
gccagagcaattagacaacaaaaagagattaaagggatacaaattgcact
ataaactgttaaggatcacaatatacaattgttaactgtgtagcatgtgc
agaattaataaatccccatatatgttttcttagagttactagcttgaaaa
caaatggtattcatacaccacttcaagttccatatccccaacatagttag
tcacatttaaggataccctcactgagtcttgggtgtctgccttatctcag
gtctctgtctcattctggacactaaaccaaacacacttatgagggaatgg
attatttcattttacatgttactactgaatgttaaaggaatatggaataa
gaatttaggtgaaggctcaaagaagaaaccacaggggaactatttttctg
acttgaaatatagctcaggtttagctattttcatttctttcatttcttcc
ttttttcataatttatttcactattcaccactctctctctcctcctattc
ccagcctcacataccccttccacattaaccctttgccattttctcagaag
aagggaaaaccctccatgagtaggaacaaaataatcataggagggagggg
ctggattgagagaggagggcgatggggaaaggtgacaaagtcagggttgg
aatagaaacttcggtgatgtcaacgatacgaatgaacagagtgtgatcat
ggggattgggaactgggt
gaattctcacccaaagaataccgaaaggctgagaaacacctgaaaaaatg
ttcaacatccttaatcattagagaaatgcaaatcaaaacaaccctgagat
tccacctcacaacagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtagagaaagaggaacactccttcattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggttcttcctca
gaaaattggacaaaatactaccaaaggatcccacaatacctctcctgggc
atatatgcagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaaaacccagatg
ccccacaacagaggaatggatacaaaaaatgtggtacatttacacaatgg
agtactattcagctattaaaaagaatgattttacttttaattcctacgca
aatggttggacctggagggcatcatcctgagtgaggtaacccaatcacaa
aaaaactcaaatgaaatatactcactgataagtggatattagcccagaaa
cttagtatagtgagatataagttacaagatgcaaaacacatgaaactgaa
gaagaacgaagaccaaagtgtggacattttgctccttcttagaattggaa
acaatccacccatggaaggaagttacagagtcaaagtttggagctgagac
aaaaggatggaccatctagagactgccatatccagggttccatcccataa
ttagcctctaaacaatgacaccattgcatacccaagcaagcctttgttgc
aaggaccgtgatatagctgtcccttgtgagactaagccggggcctagcaa
acacagaagtggatgctcacagtcaactattggatggatcacaggccccc
catggaggagctagagaaagtatccaaggagctaaagagatctgcaacct
ataggaggaacaacattatgaactaacagtactccgaaggtcttgaactc
tagcttcatatgtaccaaaaaaggcatacgatcgggcactcacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_129842598_129843777
seq2: B6Ng01-334I11.b_51_1218

seq1  GAATTCTTGTATATATTCGATATTAGGTCTCTATCAGATTTAGTGTTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTATATATTCGATATTAGGTCTCTATCAGATTTAGTGTTGGT  50

seq1  AAAGATCTTTTCCCAATCTGTTGGTTGCCTTTTTGTCTTATTGACAGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATCTTTTCCCAATCTGTTGGTTGCCTTTTTGTCTTATTGACAGTGT  100

seq1  CTTTTGCCTTACAGAAGCTTTACAATTTTATGAGGTCTTATTTGACAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGCCTTACAGAAGCTTTACAATTTTATGAGGTCTTATTTGACAACA  150

seq1  CTTGATGTTATCACATGCACAGTTGGTGTTCTGTTCAGGATTTTTTTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATGTTATCACATGCACAGTTGGTGTTCTGTTCAGGATTTTTTTCTG  200

seq1  CTGTGTACTTGTATTTGAGAGCTTTCCTCATTTTCTCTTCTATTATTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTACTTGTATTTGAGAGCTTTCCTCATTTTCTCTTCTATTATTTTC  250

seq1  AACATCCCTTCATGGTAAAAATCTTTGAAAGATTAGGACTCCAAGGTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCCCTTCATGGTAAAAATCTTTGAAAGATTAGGACTCCAAGGTCCA  300

seq1  TACAGAAACATAGTAAAAACAATAAACATCAAATCAGTCACCAACATCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAAACATAGTAAAAACAATAAACATCAAATCAGTCACCAACATCAA  350

seq1  ACTAAATGGAAAGAAACTTGAAGCAATCCCACTAAAATCAGGAACTAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAATGGAAAGAAACTTGAAGCAATCCCACTAAAATCAGGAACTAGAC  400

seq1  AAAGCTGCCCACTCTTTCTCTACCTATTTAATATAGTACTTGAATCCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTGCCCACTCTTTCTCTACCTATTTAATATAGTACTTGAATCCCAA  450

seq1  GCCAGAGCAATTAGACAACAAAAAGAGATTAAAGGGATACAAATTGCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAGCAATTAGACAACAAAAAGAGATTAAAGGGATACAAATTGCACT  500

seq1  ATAAACTGTTAAGGATCACAATATACAATTGTTAACTGTGTAGCATGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACTGTTAAGGATCACAATATACAATTGTTAACTGTGTAGCATGTGC  550

seq1  AGAATTAATAAATCCCCATATATGTTTTCTTAGAGTTACTAGCTTGAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTAATAAATCCCCATATATGTTTTCTTAGAGTTACTAGCTTGAAAA  600

seq1  CAAATGGTATTCATACACCACTTCAAGTTCCATATCCCCAACATAGTTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGGTATTCATACACCACTTCAAGTTCCATATCCCCAACATAGTTAG  650

seq1  TCACATTTAAGGATACCCTCACTGAGTCTTGGGTGTCTGCCTTATCTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTTAAGGATACCCTCACTGAGTCTTGGGTGTCTGCCTTATCTCAG  700

seq1  GTCTCTGTCTCATTCTGGACACTAAACCAAACACACTTATGAGGGAATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGTCTCATTCTGGACACTAAACCAAACACACTTATGAGGGAATGG  750

seq1  ATTATTTCATTTTACATGTTACTACTGAATGTTAAAGGAATATGGAATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTCATTTTACATGTTACTACTGAATGTTAAAGGAATATGGAATAA  800

seq1  GAATTTAGGTGAAGGCTCAAAGAAGAAACCACAGGGGAACTATTTTTCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTAGGTGAAGGCTCAAAGAAGAAACCACAGGGGAACTATTTTTCTG  850

seq1  ACTTGAAATATAGCTCAGGTTTAGCTATTTTCATTTCTTTCATTTCTTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAAATATAGCTCAGGTTTAGCTATTTTCATTTCTTTCATTTCTTCC  900

seq1  TTTTTTCATAATTTATTTCACTATTCACCACTCTCTCCTCTCCTCCTATT  950
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTTTTTCATAATTTATTTCACTATTCACCACTCTCT-CTCTCCTCCTATT  949

seq1  CCCAGCCTCACATACCCCTTCCACATTAACCCTTTGCCATTTTCTCAG-A  999
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CCCAGCCTCACATACCCCTTCCACATTAACCCTTTGCCATTTTCTCAGAA  999

seq1  GAAGGGAAAACCCTCCATGAGTAAGAACAAAATAATCATAGGAGGGAGGG  1049
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GAAGGGAAAACCCTCCATGAGTAGGAACAAAATAATCATAGGAGGGAGGG  1049

seq1  GCTTGGATTGAGAGAGGAGGGCGATGGGGAAAAAGGGTGACAAGGTCAGG  1099
      || |||||||||||||||||||||||||||||   |||||||| ||||||
seq2  GC-TGGATTGAGAGAGGAGGGCGATGGGGAAA---GGTGACAAAGTCAGG  1095

seq1  TGTGGGAT-GAGAC-TCGGTAGATGTACAACAGATCAGGAAATTGAACAG  1147
        ||| || || || ||||| ||||| |||| ||| | |||  |||||||
seq2  GTTGGAATAGAAACTTCGGT-GATGT-CAAC-GAT-ACGAA--TGAACAG  1139

seq1  AGGTGTGTATCAGTGGGGGATTGGGAACTGGGT  1180
      | ||||| ||||   ||||||||||||||||||
seq2  A-GTGTG-ATCA--TGGGGATTGGGAACTGGGT  1168