BAC Information

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BAC

Clone NameB6Ng01-336P24
Chromosome6 (Build37)
Map Location 96,519,946 - 96,520,280
singlet/doubletsinglet
Overlap geneC630007B19Rik
Upstream geneSuclg2, LOC665886, LOC545867, LOC100043685, 1700123L14Rik
Downstream geneC130034I18Rik, A130022J15Rik, Tmf1, Ube1c, Arl6ip5, Lmod3, Frmd4b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-336P24.bB6Ng01-336P24.g
ACCGA121757GA121758
length1,104335
definitionB6Ng01-336P24.b B6Ng01-336P24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatccctgccaatccatgagcatgggagatctttccatct
tctgagatctttcttttaatttctttcttcagagattttgaagtttttta
tcatacagaatcttttcacctcccttagttagaagtcaccgccaagatat
ttttatatttacttgtgactattgagaagggtgttgtttccctatttctt
tctcagcctgtttattctttggtatagaggaagggccattgaactggttt
gagtttatttatatatccaagcctactgtcactcgaaggcgtgttttatc
agag

tcctcaactcttctgtcaacttgccacatcgtgttccgatttgttaaaca
aagagagtggcaaagttgagaatatctaatgagttagaaaatgcagctgc
tgccacctaggagagctcaagagtcgcagtgatgtgtctgctcagacttc
caaagacagactttaactctgggctttgatagccctctttgtgccaaaat
ctcattgcatgatttaaaaatttagtctcttttctgggcaaggcagaaga
cctaaatattccataaaaagaggaagaatccctcagctaccagtagaact
atttccatgtgatttatggggttggggtttttgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_96519946_96520280
seq2: B6Ng01-336P24.g_71_405 (reverse)

seq1  AACAAAAACCCCAACCCCATAAATCACATGGAAATAGTTCTACTGGTAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAACCCCAACCCCATAAATCACATGGAAATAGTTCTACTGGTAGC  50

seq1  TGAGGGATTCTTCCTCTTTTTATGGAATATTTAGGTCTTCTGCCTTGCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGATTCTTCCTCTTTTTATGGAATATTTAGGTCTTCTGCCTTGCCC  100

seq1  AGAAAAGAGACTAAATTTTTAAATCATGCAATGAGATTTTGGCACAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGAGACTAAATTTTTAAATCATGCAATGAGATTTTGGCACAAAGA  150

seq1  GGGCTATCAAAGCCCAGAGTTAAAGTCTGTCTTTGGAAGTCTGAGCAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTATCAAAGCCCAGAGTTAAAGTCTGTCTTTGGAAGTCTGAGCAGAC  200

seq1  ACATCACTGCGACTCTTGAGCTCTCCTAGGTGGCAGCAGCTGCATTTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCACTGCGACTCTTGAGCTCTCCTAGGTGGCAGCAGCTGCATTTTCT  250

seq1  AACTCATTAGATATTCTCAACTTTGCCACTCTCTTTGTTTAACAAATCGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATTAGATATTCTCAACTTTGCCACTCTCTTTGTTTAACAAATCGG  300

seq1  AACACGATGTGGCAAGTTGACAGAAGAGTTGAGGA  335
      |||||||||||||||||||||||||||||||||||
seq2  AACACGATGTGGCAAGTTGACAGAAGAGTTGAGGA  335


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