BAC Information

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BAC

Clone NameB6Ng01-337O05
Chromosome6 (Build37)
Map Location 73,904,528 - 74,004,076
singlet/doubletdoublet
Overlap genenone
Upstream geneTmsb10, Dnahc6, Suclg1, Olfr210-ps1, 4931417E11Rik, LOC100043338
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337O05.bB6Ng01-337O05.g
ACCGA122365GA122366
length1,124930
definitionB6Ng01-337O05.b B6Ng01-337O05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,002,941 - 74,004,076)(73,904,528 - 73,905,451)
sequence
gaattcagattttatatcaaaagtctagggcacagaattgagtatattcc
aataaacaaatactagaatagatatctcatactatttacaggagaagact
tggaaggtactcagtatctttctgcagtttcctatgagttataaataaac
cagtgttccgcatagactcaagaggaaacaaaaagtgtttattactccca
tcatgtccatgccaagcccacaatggagagggaagataatacaagtattg
ggatcattacttgctgcttctgacccaaatccattgtttatggcttcctt
tatttcatgttctttacttgacttaagaaaatctacaaagttctgtgtct
tgggacaggtctgtaagcccagctaaacaggaggctgaagtagaaaggtc
ccaagatgaaggcctgcttgtaatgcatagaaaatcaatcttagtgctcc
aaagagtttttctgatttatgattaaagaactaatgtcccagtgtgattt
tattttgttattagggcagagaaaaaaatcaacagcttatgtatcaaata
taacccactagatttctataaagttatgttggatcagttctatctatctt
ttttcagtattgaacatgattgtgcttactcttcagcagaattgaacagt
tgccaccgataggaagcctctagtatttactatgtgaatatctgctttga
gctaaaatcgctttttgtggcaaaggtttagacacaaaggcaggattttg
ctataagagtaaaggtgcttaagaaatatcagatgtttccttattgtttt
cattcactttgtccatgatgtagaattgacattcttagttgtttcacaat
gactaaagtatccaaaagtatcttgcctgaagtatgagttatagagggat
ttaaaaggaaaaatgaaaagattttgtatatattatttatattatattag
tatattttgtatactattttgtatattatatcagaatcaaatatacctat
caatgtatctgagccttatatttgattcaaattaatccttgctactttgt
tattttttgcatagaaaaaataagtgttgtcctgaataacattgaagaga
actgggcttcaagttgtctttacc
gaattcctgctgtgacttgatttcccagagtagtacccaatggaggagct
tctctttctcttagagaaagggaaggagtgatgggggagggatttttaag
tttgggactgggaagaaatgagggggaaaggctgcaattgggatgaaaag
tgaataaatgaattaacagcaacaacagcaagaacaagaaggatagctac
acaaatggaacgaggcatgtactacttgccacagcaaaggagttagcatc
atttagagtcagataatatggaaggcaagcaggctggggagaatcttcaa
agcagagacagggaaagctccagtgtaactgagcgggaggtctaactaga
agttaggtattctgactgacacactgagaagcatatctgactgtctgtgg
ttgcttgtagttagaaccataaggaaaattatgaaaacttatgttcaata
catcctgagcattggttgcaaaggctgtactcttaacctatagggttggt
tgttaccaatgttataggttaggtctctattgtcacttataatctacctt
ttgctgctttgtgcatttcatttgtcatatcaatgcgacttaaaaatctt
aaaattttctacaaagacttggaacttatatttgacaatggaagaacatc
aagtagctcataaatatctaaacctatccatttccattttaaagtcatgc
ttgatttggtagccataaaggatggatgatgagcatacaattttatttat
aaacaatgatagtcaggactgcttaaaatatacaatagcatgataacatt
acgtggttcaattaaagtcctgtgttttaggaaatcattagaatagaaac
atattctttctgtgtagcagaaagaagataacttttagaagaatgtcaga
tgggttcagcctgtaataggggttcagaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_74002941_74004076
seq2: B6Ng01-337O05.b_47_1170 (reverse)

seq1  GGTAAAACCAACTTGGAAAACCCAG-TCTCTTCCATGTTATTCAGACCAA  49
      ||||||  |||||||  || ||||| ||||||| |||||||||||  |||
seq2  GGTAAAGACAACTTG--AAGCCCAGTTCTCTTCAATGTTATTCAGGACAA  48

seq1  CACTTTAATTTTTCTATGCAAAAAATAAACAAAAGTAAGCAAAGGATTTA  99
      ||| ||| ||||||||||||||||||||   ||||| ||| ||||| |||
seq2  CAC-TTATTTTTTCTATGCAAAAAATAA--CAAAGT-AGC-AAGGA-TTA  92

seq1  ATTTGAATCAAATATAAGGGCTCAGATACATTTGATTAGGTATATTTGAT  149
      ||||||||||||||||| |||||||||||| |||| ||||||||||||||
seq2  ATTTGAATCAAATATAA-GGCTCAGATACA-TTGA-TAGGTATATTTGAT  139

seq1  TTCTTGATATAATATACAAAATAGTATACAAAATATACTAATATAATATA  199
      |   ||||||||||||||||||||||||||||||||||||||||||||||
seq2  T--CTGATATAATATACAAAATAGTATACAAAATATACTAATATAATATA  187

seq1  AATAATATATACAAAATCTTTTCATTTTTCCTTTTAAATCCCTCTATAAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATATATACAAAATCTTTTCATTTTTCCTTTTAAATCCCTCTATAAC  237

seq1  TCATACTTCAGGCAAGATACTTTTGGATACTTTAGTCATTGTGAAACAAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACTTCAGGCAAGATACTTTTGGATACTTTAGTCATTGTGAAACAAC  287

seq1  TAAGAATGTCAATTCTACATCATGGACAAAGTGAATGAAAACAATAAGGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATGTCAATTCTACATCATGGACAAAGTGAATGAAAACAATAAGGA  337

seq1  AACATCTGATATTTCTTAAGCACCTTTACTCTTATAGCAAAATCCTGCCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCTGATATTTCTTAAGCACCTTTACTCTTATAGCAAAATCCTGCCT  387

seq1  TTGTGTCTAAACCTTTGCCACAAAAAGCGATTTTAGCTCAAAGCAGATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTCTAAACCTTTGCCACAAAAAGCGATTTTAGCTCAAAGCAGATAT  437

seq1  TCACATAGTAAATACTAGAGGCTTCCTATCGGTGGCAACTGTTCAATTCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATAGTAAATACTAGAGGCTTCCTATCGGTGGCAACTGTTCAATTCT  487

seq1  GCTGAAGAGTAAGCACAATCATGTTCAATACTGAAAAAAGATAGATAGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAGAGTAAGCACAATCATGTTCAATACTGAAAAAAGATAGATAGAA  537

seq1  CTGATCCAACATAACTTTATAGAAATCTAGTGGGTTATATTTGATACATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCCAACATAACTTTATAGAAATCTAGTGGGTTATATTTGATACATA  587

seq1  AGCTGTTGATTTTTTTCTCTGCCCTAATAACAAAATAAAATCACACTGGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTTGATTTTTTTCTCTGCCCTAATAACAAAATAAAATCACACTGGG  637

seq1  ACATTAGTTCTTTAATCATAAATCAGAAAAACTCTTTGGAGCACTAAGAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAGTTCTTTAATCATAAATCAGAAAAACTCTTTGGAGCACTAAGAT  687

seq1  TGATTTTCTATGCATTACAAGCAGGCCTTCATCTTGGGACCTTTCTACTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTCTATGCATTACAAGCAGGCCTTCATCTTGGGACCTTTCTACTT  737

seq1  CAGCCTCCTGTTTAGCTGGGCTTACAGACCTGTCCCAAGACACAGAACTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCCTGTTTAGCTGGGCTTACAGACCTGTCCCAAGACACAGAACTT  787

seq1  TGTAGATTTTCTTAAGTCAAGTAAAGAACATGAAATAAAGGAAGCCATAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGATTTTCTTAAGTCAAGTAAAGAACATGAAATAAAGGAAGCCATAA  837

seq1  ACAATGGATTTGGGTCAGAAGCAGCAAGTAATGATCCCAATACTTGTATT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGGATTTGGGTCAGAAGCAGCAAGTAATGATCCCAATACTTGTATT  887

seq1  ATCTTCCCTCTCCATTGTGGGCTTGGCATGGACATGATGGGAGTAATAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCCCTCTCCATTGTGGGCTTGGCATGGACATGATGGGAGTAATAAA  937

seq1  CACTTTTTGTTTCCTCTTGAGTCTATGCGGAACACTGGTTTATTTATAAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTTGTTTCCTCTTGAGTCTATGCGGAACACTGGTTTATTTATAAC  987

seq1  TCATAGGAAACTGCAGAAAGATACTGAGTACCTTCCAAGTCTTCTCCTGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGGAAACTGCAGAAAGATACTGAGTACCTTCCAAGTCTTCTCCTGT  1037

seq1  AAATAGTATGAGATATCTATTCTAGTATTTGTTTATTGGAATATACTCAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTATGAGATATCTATTCTAGTATTTGTTTATTGGAATATACTCAA  1087

seq1  TTCTGTGCCCTAGACTTTTGATATAAAATCTGAATTC  1136
      |||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGCCCTAGACTTTTGATATAAAATCTGAATTC  1124

seq1: chr6_73904528_73905451
seq2: B6Ng01-337O05.g_65_994

seq1  GAATTCCTGCTGTGACTTGATTTCCCAGAGTAGTACCCAATGGAGGAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCTGTGACTTGATTTCCCAGAGTAGTACCCAATGGAGGAGCT  50

seq1  TCTCTTTCTCTTAGAGAAAGGGAAGGAGTGATGGGGGAGGGATTTTTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTCTCTTAGAGAAAGGGAAGGAGTGATGGGGGAGGGATTTTTAAG  100

seq1  TTTGGGACTGGGAAGAAATGAGGGGGAAAGGCTGCAATTGGGATGAAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGACTGGGAAGAAATGAGGGGGAAAGGCTGCAATTGGGATGAAAAG  150

seq1  TGAATAAATGAATTAACAGCAACAACAGCAAGAACAAGAAGGATAGCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAAATGAATTAACAGCAACAACAGCAAGAACAAGAAGGATAGCTAC  200

seq1  ACAAATGGAACGAGGCATGTACTACTTGCCACAGCAAAGGAGTTAGCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGGAACGAGGCATGTACTACTTGCCACAGCAAAGGAGTTAGCATC  250

seq1  ATTTAGAGTCAGATAATATGGAAGGCAAGCAGGCTGGGGAGAATCTTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGAGTCAGATAATATGGAAGGCAAGCAGGCTGGGGAGAATCTTCAA  300

seq1  AGCAGAGACAGGGAAAGCTCCAGTGTAACTGAGCGGGAGGTCTAACTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGACAGGGAAAGCTCCAGTGTAACTGAGCGGGAGGTCTAACTAGA  350

seq1  AGTTAGGTATTCTGACTGACACACTGAGAAGCATATCTGACTGTCTGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGGTATTCTGACTGACACACTGAGAAGCATATCTGACTGTCTGTGG  400

seq1  TTGCTTGTAGTTAGAACCATAAGGAAAATTATGAAAACTTATGTTCAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTGTAGTTAGAACCATAAGGAAAATTATGAAAACTTATGTTCAATA  450

seq1  CATCCTGAGCATTGGTTGCAAAGGCTGTACTCTTAACCTATAGGGTTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTGAGCATTGGTTGCAAAGGCTGTACTCTTAACCTATAGGGTTGGT  500

seq1  TGTTACCAATGTTATAGGTTAGGTCTCTATTGTCACTTATAATCTACCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACCAATGTTATAGGTTAGGTCTCTATTGTCACTTATAATCTACCTT  550

seq1  TTGCTGCTTTGTGCATTTCATTTGTCATATCAATGCGACTTAAAAATCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGCTTTGTGCATTTCATTTGTCATATCAATGCGACTTAAAAATCTT  600

seq1  AAAATTTTCTACAAAGACTTGGAACTTATATTTGACAATGGAAGAACATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTTCTACAAAGACTTGGAACTTATATTTGACAATGGAAGAACATC  650

seq1  AAGTAGCTCATAAATATCTAAACCTATCCATTTCCATTTTAAAGTTATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AAGTAGCTCATAAATATCTAAACCTATCCATTTCCATTTTAAAGTCATGC  700

seq1  TTGATTTGGTAGCCATAAAGGATGGATGATGAGCATACAATTTTATTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTGGTAGCCATAAAGGATGGATGATGAGCATACAATTTTATTTAT  750

seq1  AAACAATGATAGTTAGGACTGCTTAAAATATACAATAGCATGATAACATT  800
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AAACAATGATAGTCAGGACTGCTTAAAATATACAATAGCATGATAACATT  800

seq1  AACGT-GTTCAATTAAAGTCCTGTGTTT--AGAAATCTATTAGAATAGAA  847
       |||| ||||||||||||||||||||||   |||||| ||||||||||||
seq2  -ACGTGGTTCAATTAAAGTCCTGTGTTTTAGGAAATC-ATTAGAATAGAA  848

seq1  ACATATTC-TTCTGTGTAGCAGAAAGAAGAT-ACTTTTAGAAG-ATGTCA  894
      |||||||| |||||||||||||||||||||| ||||||||||| ||||||
seq2  ACATATTCTTTCTGTGTAGCAGAAAGAAGATAACTTTTAGAAGAATGTCA  898

seq1  GATGGG-TCAG-CTGTAATAGGGGTCCAGAAA  924
      |||||| |||| ||||||||||||| ||||||
seq2  GATGGGTTCAGCCTGTAATAGGGGTTCAGAAA  930