MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-338C19
Chromosome	6 (Build37)
Map Location	121,289,467 - 121,421,373
singlet/doublet	doublet
Overlap gene	Slc6a12, Iqsec3
Upstream gene	Ccdc77, Jarid1a, Il17ra, Cecr6, Cecr5, 1700072O05Rik, Cecr2, Slc25a18, Atp6v1e1, Bcl2l13, Bid, Mical3, LOC100043793, Minpp1-ps, Pex26, Tuba8, Usp18, Slc6a13
Downstream gene	LOC100043486, A2m, EG640530, Mug1, Mug4, Mug2, Mug-ps1, Klrg1, LOC625931, M6pr, Phc1, 1700063H04Rik, LOC677375, 4933426K21Rik, EG667035
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ccdc77 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67200 MGI:1914450
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Jarid1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214899 MGI:2136980
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 mRNAs, 248 ESTs, 8 Proteins

name	Il17ra (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16172 MGI:107399
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cecr6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94047 MGI:2136977
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cecr5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214932 MGI:2136976
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700072O05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73505 MGI:1920755
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Cecr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330409 MGI:1923799
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 120 ESTs, 2 Proteins

name	Slc25a18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71803 MGI:1919053
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp6v1e1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11973 MGI:894326
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bcl2l13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94044 MGI:2136959
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bid (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12122 MGI:108093
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mical3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:194401 MGI:2442733
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043793 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043793
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Minpp1-ps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17331 MGI:1336190
definition	note : multiple inositol polyphosphate histidine phosphatase 1, pseudogene pseudo : _no_value

name	Pex26 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74043 MGI:1921293
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tuba8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53857 MGI:1858225
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Usp18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24110 MGI:1344364
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc6a13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14412 MGI:95629
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc6a12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14411 MGI:95628
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Iqsec3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243621 MGI:2677208
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043486 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043486
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	A2m (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:232345 MGI:2449119
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG640530 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:640530 MGI:3648717
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 6 Proteins

name	Mug1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17836 MGI:99837
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mug4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434083 MGI:101843
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 ESTs, 2 Proteins

name	Mug2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17837 MGI:99836
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mug-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17835 MGI:99838
definition	gene_synonym : Mug3 note : murinoglobulin, pseudogene 1 pseudo : _no_value

name	Klrg1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50928 MGI:1355294
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC625931 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625931
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 150 ESTs, 5 Proteins pseudo : _no_value

name	M6pr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17113 MGI:96904
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Phc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13619 MGI:103248
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	1700063H04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74269 MGI:1921519
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	LOC677375 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:677375
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	4933426K21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108653 MGI:1918325
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667035 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667035 MGI:3645406
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 730 ESTs, 16 Proteins

name	Ccdc77 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363564 GeneID:67200 MGI:1914450
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 77 transcript_id : NM_026028.2

name	Jarid1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255408 GeneID:214899 MGI:2136980
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 mRNAs, 248 ESTs, 8 Proteins product : jumonji, AT rich interactive domain 1A (Rbp2 like), transcript variant 1 transcript_id : XM_359326.6

name	Il17ra (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680410 GeneID:16172 MGI:107399
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 17 receptor A transcript_id : NM_008359.1

name	Cecr6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:15808997 GeneID:94047 MGI:2136977
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cat eye syndrome chromosome region, candidate 6 homolog (human) transcript_id : NM_033567.1

name	Cecr5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51093868 GeneID:214932 MGI:2136976
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cat eye syndrome chromosome region, candidate 5 homolog (human) transcript_id : NM_144815.2

name	1700072O05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94378063 GeneID:73505 MGI:1920755
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700072O05 gene transcript_id : XM_987216.1

name	Cecr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94378057 GeneID:330409 MGI:1923799
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 120 ESTs, 2 Proteins product : cat eye syndrome chromosome region, candidate 2 homolog (human), transcript variant 1 transcript_id : XM_204234.6

name	Slc25a18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486669 GeneID:71803 MGI:1919053
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 25 (mitochondrial carrier), member 18 transcript_id : NM_001081048.1

name	Atp6v1e1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:45504358 GeneID:11973 MGI:894326
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : VATPase, H+ transporting, lysosomal V1 subunit E1 transcript_id : NM_007510.2

name	Bcl2l13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:77404368 GeneID:94044 MGI:2136959
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BCL2-like 13 (apoptosis facilitator) transcript_id : NM_153516.2

name	Bid (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:77404282 GeneID:12122 MGI:108093
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BH3 interacting domain death agonist transcript_id : NM_007544.3

name	Mical3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23510262 GeneID:194401 MGI:2442733
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : microtubule associated monoxygenase, calponin and LIM domain containing 3 transcript_id : NM_153396.1

name	LOC100043793 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255410 GeneID:100043793
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043793 transcript_id : XM_001480986.1

name	Pex26 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802833 GeneID:74043 MGI:1921293
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peroxisome biogenesis factor 26 transcript_id : NM_028730.3

name	Tuba8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:8394492 GeneID:53857 MGI:1858225
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tubulin, alpha 8 transcript_id : NM_017379.1

name	Usp18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755926 GeneID:24110 MGI:1344364
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin specific peptidase 18 transcript_id : NM_011909.1

name	Slc6a13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130003 GeneID:14412 MGI:95629
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 6 (neurotransmitter transporter, GABA), member 13 transcript_id : NM_144512.2

name	Slc6a12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802667 GeneID:14411 MGI:95628
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12 transcript_id : NM_133661.2

name	Iqsec3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131079 GeneID:243621 MGI:2677208
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : IQ motif and Sec7 domain 3 transcript_id : NM_001033354.2

name	A2m (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31342256 GeneID:232345 MGI:2449119
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : alpha-2-macroglobulin transcript_id : NM_175628.2

name	EG640530 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255292 GeneID:640530 MGI:3648717
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 6 Proteins product : predicted gene, EG640530 transcript_id : XM_001480274.1

name	Mug1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982170 GeneID:17836 MGI:99837
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : murinoglobulin 1 transcript_id : NM_008645.2

name	Mug2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372249 GeneID:17837 MGI:99836
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : murinoglobulin 2 transcript_id : NM_008646.2

name	Klrg1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:8850224 GeneID:50928 MGI:1355294
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : killer cell lectin-like receptor subfamily G, member 1 transcript_id : NM_016970.1

name	M6pr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47087131 GeneID:17113 MGI:96904
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mannose-6-phosphate receptor, cation dependent transcript_id : NM_010749.6

name	Phc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110835732 GeneID:13619 MGI:103248
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polyhomeotic-like 1 (Drosophila) transcript_id : NM_001042623.1

name	Phc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110835730 GeneID:13619 MGI:103248
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polyhomeotic-like 1 (Drosophila) transcript_id : NM_007905.2

name	1700063H04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255412 GeneID:74269 MGI:1921519
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : RIKEN cDNA 1700063H04 gene transcript_id : XM_001481012.1

name	LOC677375 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255298 GeneID:677375
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical LOC677375 transcript_id : XM_001480303.1

name	4933426K21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134254428 GeneID:108653 MGI:1918325
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933426K21 gene transcript_id : NM_027664.1

name	EG667035 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94378075 GeneID:667035 MGI:3645406
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 730 ESTs, 16 Proteins product : predicted gene, EG667035 transcript_id : XM_001002242.1

name	Ccdc77 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313090 CCDS:CCDS20481.1 GeneID:67200 MGI:1914450
definition	codon_start : 1 product : coiled-coil domain containing 77 protein_id : NP_080304.1

name	Jarid1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149255409 GeneID:214899 MGI:2136980
definition	codon_start : 1 product : jumonji, AT rich interactive domain 1A (Rbp2 like) isoform 1 protein_id : XP_359326.5

name	Il17ra (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680411 CCDS:CCDS20482.1 GeneID:16172 MGI:107399
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004907 - interleukin receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence IEA] codon_start : 1 product : interleukin 17 receptor protein_id : NP_032385.1

name	Cecr6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15808998 GeneID:94047 MGI:2136977
definition	codon_start : 1 product : cat eye syndrome chromosome region, candidate 6 homolog protein_id : NP_291045.1

name	Cecr5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450187 CCDS:CCDS20483.1 GeneID:214932 MGI:2136976
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 product : cat eye syndrome chromosome region, candidate 5 homolog precursor protein_id : NP_659064.1

name	1700072O05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94378064 GeneID:73505 MGI:1920755
definition	codon_start : 1 product : hypothetical protein LOC73505 protein_id : XP_992310.1

name	Cecr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83029810 GeneID:330409 MGI:1923799
definition	codon_start : 1 product : cat eye syndrome chromosome region, candidate 2 homolog isoform 1 protein_id : XP_204234.5

name	Slc25a18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486670 GeneID:71803 MGI:1919053
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : solute carrier family 25 (mitochondrial carrier), member 18 protein_id : NP_001074517.1

name	Atp6v1e1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45504359 CCDS:CCDS20484.1 GeneID:11973 MGI:894326
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA]; GO:0016469 - proton-transporting two-sector ATPase complex [Evidence IEA] GO_function : GO:0015078 - hydrogen ion transporter activity [Evidence IEA]; GO:0008553 - hydrogen-exporting ATPase activity, phosphorylative mechanism [Evidence IMP]; GO:0046933 - hydrogen-transporting ATP synthase activity, rotational mechanism [Evidence IEA]; GO:0046961 - hydrogen-transporting ATPase activity, rotational mechanism [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0006754 - ATP biosynthesis [Evidence IEA]; GO:0015991 - ATP hydrolysis coupled proton transport [Evidence IMP]; GO:0015986 - ATP synthesis coupled proton transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0015992 - proton transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : ATPase, H+ transporting lysosomal (vacuolar proton pump), 32 kDa; H(+)-ATPase E-like protein; H+ ATPase subunit E; lysosomal 31kDa; ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E; ATPase, H+ transporting, V1 subunit E product : vacuolar H+ ATPase E1 protein_id : NP_031536.2

name	Bcl2l13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23943828 CCDS:CCDS20485.1 GeneID:94044 MGI:2136959
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence ISS] [Evidence IEA] GO_function : GO:0008656 - caspase activator activity [Evidence ISS] GO_process : GO:0006919 - caspase activation [Evidence ISS]; GO:0006917 - induction of apoptosis [Evidence ISS] codon_start : 1 note : mitochondria located 1 homolog product : BCL2-like 13 protein_id : NP_705736.1

name	Bid (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542228 CCDS:CCDS20486.1 GeneID:12122 MGI:108093
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006915 - apoptosis [Evidence IDA]; GO:0043065 - positive regulation of apoptosis [Evidence IEA] codon_start : 1 product : BH3 interacting domain death agonist protein_id : NP_031570.2

name	Mical3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23510263 CCDS:CCDS20487.1 GeneID:194401 MGI:2442733
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006725 - aromatic compound metabolism [Evidence IEA]; GO:0006118 - electron transport [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : flavoprotein oxidoreductase MICAL3 product : microtubule associated monoxygenase, calponin and LIM domain containing 3 protein_id : NP_700445.1

name	LOC100043793 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255411 GeneID:100043793
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481036.1

name	Pex26 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21311973 CCDS:CCDS20488.1 GeneID:74043 MGI:1921293
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005779 - integral to peroxisomal membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005777 - peroxisome [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0045046 - protein import into peroxisome membrane [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : peroxisome biogenesis factor 26 protein_id : NP_083006.1

name	Tuba8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8394493 GeneID:53857 MGI:1858225
definition	GO_component : GO:0005874 - microtubule [Evidence ISS] [Evidence IEA]; GO:0043234 - protein complex [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005200 - structural constituent of cytoskeleton [Evidence ISS]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0000226 - microtubule cytoskeleton organization and biogenesis [Evidence ISS]; GO:0007018 - microtubule-based movement [Evidence IEA]; GO:0051258 - protein polymerization [Evidence IEA] codon_start : 1 product : tubulin, alpha 8 protein_id : NP_059075.1

name	Usp18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755927 CCDS:CCDS20489.1 GeneID:24110 MGI:1344364
definition	GO_function : GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]; GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0019785 - ISG15-specific protease activity [Evidence IMP]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004221 - ubiquitin thiolesterase activity [Evidence IEA] GO_process : GO:0032020 - ISG15-protein conjugation [Evidence IMP]; GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : ubiquitin specific protease 15 product : ubiquitin specific protease 18 protein_id : NP_036039.1

name	Slc6a13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21362295 CCDS:CCDS20490.1 GeneID:14412 MGI:95629
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005328 - neurotransmitter:sodium symporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006836 - neurotransmitter transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : gamma-aminobutyric acid (GABA-A) transporter 3 product : solute carrier family 6 (neurotransmitter transporter, GABA), member 13 protein_id : NP_653095.1

name	Slc6a12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:92110009 GeneID:14411 MGI:95628
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005328 - neurotransmitter:sodium symporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006836 - neurotransmitter transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : gamma-aminobutyric acid (GABA-A) transporter 2 product : solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12 protein_id : NP_598422.2

name	Iqsec3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84781690 CCDS:CCDS20491.1 GeneID:243621 MGI:2677208
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005086 - ARF guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0032012 - regulation of ARF protein signal transduction [Evidence IEA] codon_start : 1 product : IQ motif and Sec7 domain 3 protein_id : NP_001028526.1

name	A2m (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28274695 GeneID:232345 MGI:2449119
definition	GO_function : GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]; GO:0030414 - protease inhibitor activity [Evidence TAS] codon_start : 1 exception : unclassified translation discrepancy product : alpha-2-macroglobulin protein_id : NP_783327.1

name	EG640530 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149255293 GeneID:640530 MGI:3648717
definition	codon_start : 1 product : similar to Murinoglobulin 1 protein_id : XP_001480324.1

name	Mug1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982171 GeneID:17836 MGI:99837
definition	GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]; GO:0008199 - ferric iron binding [Evidence IEA]; GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA]; GO:0017114 - wide-spectrum protease inhibitor activity [Evidence IEA] GO_process : GO:0006725 - aromatic compound metabolism [Evidence IEA] codon_start : 1 product : murinoglobulin 1 protein_id : NP_032671.2

name	Mug2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678966 GeneID:17837 MGI:99836
definition	GO_function : GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]; GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA]; GO:0017114 - wide-spectrum protease inhibitor activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : murinoglobulin 2 protein_id : NP_032672.1

name	Klrg1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8850225 CCDS:CCDS20492.1 GeneID:50928 MGI:1355294
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0005529 - sugar binding [Evidence TAS] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence TAS] codon_start : 1 product : killer cell lectin-like receptor subfamily G, member 1 protein_id : NP_058666.1

name	M6pr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14916479 CCDS:CCDS20493.1 GeneID:17113 MGI:96904
definition	GO_component : GO:0005768 - endosome [Evidence ISS]; GO:0005770 - late endosome [Evidence IDA]; GO:0005764 - lysosome [Evidence IEA]; GO:0000323 - lytic vacuole [Evidence IEA] GO_function : GO:0005537 - mannose binding [Evidence IEA]; GO:0015578 - mannose transporter activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006886 - intracellular protein transport [Evidence TAS]; GO:0015761 - mannose transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : mannose-6-phosphate receptor, cation dependent protein_id : NP_034879.2

name	Phc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110835733 GeneID:13619 MGI:103248
definition	GO_component : GO:0016604 - nuclear body [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA]; GO:0001739 - sex chromatin [Evidence IDA] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; early development regulator1 (homolog of polyhomeotic 1); early development regulator 1 (homolog of polyhomeotic 1) product : polyhomeotic-like 1 isoform b protein_id : NP_001036088.1

name	Phc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110835731 CCDS:CCDS20494.1 GeneID:13619 MGI:103248
definition	GO_component : GO:0016604 - nuclear body [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA]; GO:0001739 - sex chromatin [Evidence IDA] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; early development regulator1 (homolog of polyhomeotic 1); early development regulator 1 (homolog of polyhomeotic 1) product : polyhomeotic-like 1 isoform a protein_id : NP_031931.2

name	1700063H04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149255413 GeneID:74269 MGI:1921519
definition	codon_start : 1 product : hypothetical protein LOC74269 protein_id : XP_001481062.1

name	LOC677375 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255299 GeneID:677375
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480353.1

name	4933426K21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134254429 GeneID:108653 MGI:1918325
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006464 - protein modification [Evidence IEA]; GO:0007046 - ribosome biogenesis [Evidence IEA] codon_start : 1 product : hypothetical protein LOC108653 protein_id : NP_081940.1

name	EG667035 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94378076 GeneID:667035 MGI:3645406
definition	codon_start : 1 product : similar to fusion protein: ubiquitin (bases 43_513); ribosomal protein S27a (bases 217_532) protein_id : XP_001002242.1

name	LOC100043486 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043486
definition	number : 1 pseudo : _no_value

name	LOC100043486 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043486
definition	number : 2 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:142590
definition	standard_name : RH115429

name	(CDS detail)
type	STS
link
xref	UniSTS:235543
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:161675
definition	standard_name : RH124853

name	(CDS detail)
type	STS
link
xref	UniSTS:162787
definition	standard_name : RH126075

name	(CDS detail)
type	STS
link
xref	UniSTS:232022
definition	standard_name : RH142775

name	(CDS detail)
type	STS
link
xref	UniSTS:208027
definition	standard_name : AI132377

name	(CDS detail)
type	STS
link
xref	UniSTS:179451
definition	standard_name : AW538159

name	(CDS detail)
type	STS
link
xref	UniSTS:164341
definition	standard_name : AW048664

name	(CDS detail)
type	STS
link
xref	UniSTS:235539
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:208020
definition	standard_name : AU021805

name	(CDS detail)
type	STS
link
xref	UniSTS:121944
definition	standard_name : d4rat113

name	(CDS detail)
type	STS
link
xref	UniSTS:142945
definition	standard_name : EC100RL

name	(CDS detail)
type	STS
link
xref	UniSTS:130923
definition	standard_name : D6Mit369

name	(CDS detail)
type	STS
link
xref	UniSTS:235544
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:165487
definition	standard_name : AW125787

name	(CDS detail)
type	STS
link
xref	UniSTS:167485
definition	standard_name : RH127114

name	(CDS detail)
type	STS
link
xref	UniSTS:249716
definition	standard_name : AA818483

name	(CDS detail)
type	STS
link
xref	UniSTS:208025
definition	standard_name : AW105739

name	(CDS detail)
type	STS
link
xref	UniSTS:235540
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:208023
definition	standard_name : AU022477

name	(CDS detail)
type	STS
link
xref	UniSTS:159565
definition	standard_name : AU022477

name	(CDS detail)
type	STS
link
xref	UniSTS:141177
definition	standard_name : Bid

name	(CDS detail)
type	STS
link
xref	UniSTS:165485
definition	standard_name : AI875481

name	(CDS detail)
type	STS
link
xref	UniSTS:141176
definition	standard_name : Bid

name	(CDS detail)
type	STS
link
xref	UniSTS:224314
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:248252
definition	standard_name : BE109414

name	(CDS detail)
type	STS
link
xref	UniSTS:235546
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:142946
definition	standard_name : EC100RR

name	(CDS detail)
type	STS
link
xref	UniSTS:130761
definition	standard_name : D6Mit216

name	(CDS detail)
type	STS
link
xref	UniSTS:225199
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:179452
definition	standard_name : AW047653

name	(CDS detail)
type	STS
link
xref	UniSTS:225232
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:210070
definition	standard_name : RH136075

name	(CDS detail)
type	STS
link
xref	UniSTS:143157
definition	standard_name : Gabt3

name	(CDS detail)
type	STS
link
xref	UniSTS:143156
definition	standard_name : Gabt2

name	(CDS detail)
type	STS
link
xref	UniSTS:246714
definition	standard_name : BI295714

name	(CDS detail)
type	STS
link
xref	UniSTS:235547
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:227699
definition	standard_name : D4Arb40

name	(CDS detail)
type	STS
link
xref	UniSTS:159566
definition	standard_name : MHAa82c12.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:159566
definition	standard_name : MHAa82c12.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:160950
definition	standard_name : RH118304

name	(CDS detail)
type	STS
link
xref	UniSTS:185684
definition	standard_name : AF097357

name	(CDS detail)
type	STS
link
xref	UniSTS:179456
definition	standard_name : AW557034

name	(CDS detail)
type	STS
link
xref	UniSTS:235548
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:235549
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:225109
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:179455
definition	standard_name : AI325948

name	(CDS detail)
type	misc_feature
link
xref
definition	function : clone overlap note : overlaps bases 1..54896 of clone AC153579

name	Mug-ps1 (CDS detail)
type	misc_feature
link	vega ensembl
xref
definition	function : variable size of repeat between subclones gene_synonym : Mug3 note : variable size of repeat (polyAGGCAG) in subclone, size 23-25, deletion at 77806 pseudo : _no_value

name	Mug-ps1 (CDS detail)
type	misc_feature
link	vega ensembl
xref
definition	function : pcr product sequence only gene_synonym : Mug3 note : PCR product sequence only pseudo : _no_value

name	Mug-ps1 (CDS detail)
type	misc_feature
link	vega ensembl
xref
definition	function : unsure gene_synonym : Mug3 note : unsure base: C/T pseudo : _no_value

name	Mug-ps1 (CDS detail)
type	misc_feature
link	vega ensembl
xref
definition	function : single clone coverage gene_synonym : Mug3 note : single subclone pseudo : _no_value

name	Mug-ps1 (CDS detail)
type	misc_feature
link	vega ensembl
xref
definition	function : variable size of repeat between subclones gene_synonym : Mug3 note : variable size of repeat (polyGA) in subclone, size 27-28, deletion at 88510 pseudo : _no_value

name	Mug4 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149255294 GeneID:434083 MGI:101843
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 ESTs, 2 Proteins product : murinoglobulin 4 transcript_id : XR_035731.1

name	LOC625931 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255295 GeneID:625931
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 150 ESTs, 5 Proteins product : similar to nuclear protein-NHP2-like protein pseudo : _no_value transcript_id : XR_034615.1

clone name	MSMg01-349A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533C22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-400P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062L10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-399M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391J01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-194H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404K14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-359N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422L19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-321F04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-364G14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-422L19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-276D14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-190E11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-467G04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-419N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179P12
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-338C19.b	B6Ng01-338C19.g
ACC	GA122558	GA122559
length	1,181	1,187
definition	B6Ng01-338C19.b	B6Ng01-338C19.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(121,420,206 - 121,421,373)	(121,289,467 - 121,290,661)
sequence	gaattctctcctcattatatctggtatcctctttctctcctattacagcc tcagtgtctttgcaacttgttgggaagctgtgattgataagaattgatga ctgatcttgttcttggagaaagacttctctgtggcccccaaagggtccca gagagcccatgccttctatacagatgttcctgctaggagtccagaggttg aggaatcacctggattcctctcgggcctcacatgtcaataccatgtgaca tccttgaactctgtcttccctaccctgtttctgcttcccatggaccaaaa ataagaaccaaccagcatggtggaaggcaatggaagatgctgtgaacatg ttactaggcactaaggggtttatcgtaacattagcttctctggagtctcc agcctttttcaggcctagatacccagaaacatcaagagtgagcacatagt taccttacttcccttcaactttcttcccttctttgtgaagtaaagcacac ctcggatggctggaggtccctggaatgatatttctctcccatgtttttgc ctgacttcaagcaacatctcccccatagaactcaggagtgaatcactgtg gctcattaatttagctcactctgtcctctacccatggcctcatggatgtt tatcctttgggaattccttagcccatggggcaaggatagatggatccagc aggtagagagagacctccatgtatagggtgaaggaagggaccaggaccag cagccagtgcccctgagccccacctggaccagtgcccctgagccccacct ggtcctatcccatgcttctgctaagtcagttccctattgtgcagagaggg aagagatggaacaggaaggtcttcagatcacaagtttcctgcaaagcttt gcttattcctctctgtcctcattacaaaaggagaatgtaggtctatatag gtgactacagatgggtaaacactgttagataccgtacacacacacacaca cacacacacacacacacacacacacacacacacacacacattgccagcca ccaaagtcgctctctctcctttcaagttctcttcttttccccaactcttg gggagggagcaccaggagctccaggaactgagaaatgattagattcattt agtgccatctgaataaggatttaagtgtgca	gaattcacattcaattttcagatgtggataactccatgtatcctgcccac acagttttatgacagggatcaaatgaagtcaggggcccaagtattctttt agtccggttttgggttcaagcgagggagataaatgctggctgacaggcgg agatgatggagatttgagaaatgtggctggtgtgctcagagtctgtcaac actgtttcgtttttgctttgttttgttttgaaacaggaccccagtcttag ctcaggctgtccttgaactcactatatagttcagggtggccttgaactca cagagatcctcttgcctcaacttcccaagtgttgaaattatagatgtgag cgaccaagcctagctatagtcagagttgggagctatggtacttgagtttg gctttggctgaggtagaggcataggtgaggtgaaggactgaggatagctg tgtccctatctgtatggggcagagactggatcctgcagttccccaaagaa agcaaggcagggaggggaggctacacagagaggtcggcaggcaagcacta ggagagataatctgagtgcaggaggcagaagcataggggaaactggcacc tgagaagatgcccatggcaccaggaaggcacttactaatccctgagccca ctaggctacctggagaactcaactgcccaaggttcagacccaggcacatc tcacaaccccggccatccctagacagtgtgcacataagcacaggtcacct gggcaaccttcttaatagaggcttgcagcctattttggatctcaaccctc acattcaataacaggcaaactattctgtgatcttgtttctcctctaaact atgctaaaactactgcttaccccacagcctcaccagactccagcagaaac aggcacccaggaagcactctgggtaaacacttccatttactgtggctgca ccccagcagtcgctctctcatagcagaaagccctggaggtgtccaggaca gcataccaccccttagtctcagagagatgcgcatttacttagctaagtga attgctagggatgaggaagaagtagcctcaaatagcctgtgttcaatggc cctgggctgggcctcgatccctggatctgagagagcaacgcgtatgtctg tctaagccaacggagtggcatatgattgtttctcctg
quality values	Open. Hide. 58 36 20 27 62 62 62 62 62 62 62 62 41 43 54 54 56 62 62 47 62 49 62 54 62 56 47 51 45 45 34 32 62 62 49 49 62 62 62 62 62 62 62 59 62 62 49 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 59 62 62 59 59 62 59 59 62 62 59 62 62 62 62 62 54 49 62 62 62 62 62 62 62 62 62 62 49 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 54 62 62 62 59 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 54 54 62 62 62 62 62 58 58 58 58 58 54 58 58 54 58 58 58 58 58 58 58 58 58 58 58 49 58 58 58 58 58 58 58 58 48 58 58 58 54 49 58 58 54 53 58 58 58 54 58 58 54 58 58 58 54 41 41 58 58 52 58 54 51 58 58 52 58 58 52 54 58 54 37 58 58 58 58 54 58 54 58 58 58 54 49 49 54 58 52 58 51 58 58 51 58 58 58 53 53 58 58 53 54 58 58 51 58 58 51 49 47 54 58 43 50 58 58 51 40 58 58 58 49 49 51 50 46 51 58 58 42 39 58 50 58 44 50 51 50 43 48 54 41 51 58 54 49 50 30 54 50 49 49 51 52 37 50 41 41 50 50 58 49 58 51 52 53 50 48 49 35 39 52 51 47 33 58 58 32 50 40 51 32 53 49 51 23 58 39 52 26 46 30 51 41 51 50 37 24 42 49 40 42 33 40 58 47 53 51 53 38 58 49 50 54 49 40 39 58 38 36 49 49 40 49 26 40 32 30 53 31 13 44 40 39 53 49 32 51 51 37 45 40 52 39 52 50 50 37 33 32 10 52 49 44 50 27 40 47 41 42 26 31 26 41 40 26 30 45 45 46 42 44 39 35 34 19 52 44 42 40 37 32 49 34 44 42 22 24 34 32 40 34 15 49 40 31 37 32 36 33 35 32 32 42 36 33 28 33 29 40 34 29 29 53 29 25 51 40 32 31 26 31 40 29 34 33 35 24 52 17 31 24 47 31 31 40 23 41 21 31 21 30 24 25 31 30 25 25 43 43 45 31 37 18 30 21 51 31 31 17 34 25 32 31 31 28 31 32 42 48 43 31 34 31 43 23 28 47 30 30 32 43 48 31 31 31 35 27 30 26 33 14 31 29 31 43 27 31 31 31 28 31 27 29 30 27 37 32 28 13 46 46 24 16 12 37 24 36 31 27 41 22 21 27 23 22 37 31 30 30 16 30 25 27 19 19 31 32 18 31 35 37 19 28 26 16 35 47 29 19 33 44 16 19 13 28 34 33 29 25 18 13 32 18 26 29 26 33 13 31 34 22 31 11 29 19 31 16 31 13 29 23 29 14 12 22 31 19 25 19 30 13 25 27 29 18 21 17 31 22 28 20 32 19 31 20 32 16 13 11 20 8 14 8 24 12 20 16 30 6 9 12 22 11 34 24 25 15 32 17 11 15 13 5 5 6 5 5 3 4 10 4 3 3 9 8 5 5 3 6 13 6 21 10 17 22 9 16 14 8 6 9 19 6 8 7 19 6 7 25 33 27 12 28 32 10 16 9 16 19 5 4 5 28 28 15 3 10 6 14 6 6 5 6 7 5 3 6 24 13 23 9 15 6 6 6 6 3 4 6 3 2 5 4 5 5 3 9 6 4 7 11 7 4 4 4 9 5 7 7 8 18 28 20 8 4 4 3 2 2 4 7 10 6 7 14 6 5 4 4 11 6 2 3 8 4 5 5 12 6 6 4 6 5 7	Open. Hide. 62 49 39 44 62 47 42 42 32 30 32 20 24 34 46 59 62 62 59 43 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 54 54 62 59 62 62 62 59 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 59 59 62 59 59 62 62 62 62 59 59 62 62 62 62 54 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 49 43 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 47 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 47 62 62 49 47 62 49 46 62 62 62 62 62 62 62 62 62 46 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 58 41 54 58 58 58 58 54 58 58 58 58 58 58 54 54 58 58 54 58 58 58 50 58 58 54 58 58 54 54 54 52 54 58 58 58 54 54 58 58 54 54 58 58 58 54 38 58 52 58 52 54 52 58 52 54 58 41 42 42 58 54 58 54 54 52 54 45 58 54 58 58 52 58 48 42 58 58 39 58 46 31 58 52 45 41 54 58 54 58 58 58 58 39 58 54 50 51 51 58 58 25 58 42 48 50 58 51 40 58 34 49 54 33 58 58 49 58 49 44 50 49 58 58 50 42 53 58 51 58 46 29 58 47 40 41 27 48 40 44 43 37 52 54 54 49 39 39 51 40 53 58 51 40 28 58 32 39 47 58 51 52 58 52 50 58 53 50 58 44 43 54 51 23 58 58 42 40 41 53 50 29 43 50 53 34 41 54 49 54 54 49 39 58 37 25 51 42 44 29 53 53 53 49 34 44 32 53 41 54 30 47 40 40 18 51 25 42 42 25 38 39 41 19 27 30 52 45 53 38 40 32 28 39 52 49 37 39 36 52 25 40 31 40 22 44 37 53 45 37 42 27 37 40 34 53 40 44 32 30 40 27 47 25 53 34 45 37 40 33 42 51 32 38 37 36 26 41 31 46 49 42 33 41 31 34 41 53 31 32 29 32 37 36 45 31 53 21 24 28 41 32 34 26 32 32 28 37 32 32 28 49 49 38 41 37 28 28 31 32 36 34 31 24 46 21 45 34 28 29 28 28 9 22 20 28 30 21 31 31 29 31 51 31 36 51 42 31 31 31 30 31 30 29 43 30 32 24 26 25 14 14 31 25 47 31 30 29 30 31 31 29 31 31 47 19 32 31 24 30 31 36 33 19 48 48 31 31 31 31 32 28 31 29 28 25 24 31 46 46 42 25 26 25 26 30 29 32 36 12 13 16 31 11 39 24 42 39 24 16 18 29 26 20 42 39 19 19 10 20 18 16 19 23 25 23 9 5 25 18 32 14 30 19 20 19 21 31 32 48 38 25 31 41 23 21 20 34 24 32 20 33 23 33 48 38 20 24 25 38 16 24 33 17 26 29 18 8 18 41 31 24 24 19 29 27 21 31 34 22 33 35 27 21 22 7 19 23 27 27 22 21 14 9 43 47 29 18 22 31 16 12 12 18 11 13 18 16 15 20 19 29 27 24 16 17 16 20 19 24 17 29 21 33 12 9 12 26 25 24 13 18 17 6 11 16 20 19 7 14 16 9 22 10 5 13 32 13 8 27 20 28 40 16 16 14 8 18 16 9 28 16 19 28 6 6 8 9 17 8 16 3 7 15 15 15 34 13 20 8 12 13 8 21 23 25 11 20 27 11 19 16 9 24 16 20 7 19 19 9 11 24 10 13 9 5 17 7 17 4 6 21 6 8 8 20 11 7 11 19 11 22 30 24 6 11 21 29 8 4 3 3 2 3 4 4 4 28 5 15 8 3 1 2 8 10 5 8 4 15 4 7 6 5 7 6 4 5 12 8 4 4 4 8 9 8 5 4 7 12 12 8 8 4 4 4 11 2 1 3 4 4 5 8 9 2 2 2 8 11 12 5 11 4 12 13 4 3 3 4 5 8 6 4 16

Alignment Information

BAC End 1

BAC End 2

seq1: chr6_121420206_121421373
seq2: B6Ng01-338C19.b_50_1230 (reverse)

seq1  TGCACACT--AATCCCTA-TCAGATGGCCACTAAATG-ATCT-ATCATTT  45
      ||||||||  ||||| || |||||||| ||||||||| |||| |||||||
seq2  TGCACACTTAAATCCTTATTCAGATGG-CACTAAATGAATCTAATCATTT  49

seq1  CTCAGCTCCT-GAGCTCCT-GTGCTCCTTCCC--AGAGTTGGG--AAAGA  89
      ||||| |||| |||||||| ||||||| ||||  |||||||||  |||||
seq2  CTCAGTTCCTGGAGCTCCTGGTGCTCCCTCCCCAAGAGTTGGGGAAAAGA  99

seq1  AGAGGACTTG-AAGGAGAGAG-CCGACTGT-GTGGCTGGCAATGTGTGTG  136
      |||| ||||| ||||||||||  ||||| | |||||||||||||||||||
seq2  AGAGAACTTGAAAGGAGAGAGAGCGACTTTGGTGGCTGGCAATGTGTGTG  149

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACG  186
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACG  199

seq1  GTATCTAACAGTGTTTACCCATCTGTAGTCACCTATATAGACCTACATTC  236
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTAACAGTGTTTACCCATCTGTAGTCACCTATATAGACCTACATTC  249

seq1  TCCTTTTGTAATGAGGACAGAGAGGAATAAGCAAAGCTTTGCAGGAAACT  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTGTAATGAGGACAGAGAGGAATAAGCAAAGCTTTGCAGGAAACT  299

seq1  TGTGATCTGAAGACCTTCCTGTTCCATCTCTTCCCTCTCTGCACAATAGG  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATCTGAAGACCTTCCTGTTCCATCTCTTCCCTCTCTGCACAATAGG  349

seq1  GAACTGACTTAGCAGAAGCATGGGATAGGACCAGGTGGGGCTCAGGGGCA  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGACTTAGCAGAAGCATGGGATAGGACCAGGTGGGGCTCAGGGGCA  399

seq1  CTGGTCCAGGTGGGGCTCAGGGGCACTGGCTGCTGGTCCTGGTCCCTTCC  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCCAGGTGGGGCTCAGGGGCACTGGCTGCTGGTCCTGGTCCCTTCC  449

seq1  TTCACCCTATACATGGAGGTCTCTCTCTACCTGCTGGATCCATCTATCCT  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCCTATACATGGAGGTCTCTCTCTACCTGCTGGATCCATCTATCCT  499

seq1  TGCCCCATGGGCTAAGGAATTCCCAAAGGATAAACATCCATGAGGCCATG  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCATGGGCTAAGGAATTCCCAAAGGATAAACATCCATGAGGCCATG  549

seq1  GGTAGAGGACAGAGTGAGCTAAATTAATGAGCCACAGTGATTCACTCCTG  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAGGACAGAGTGAGCTAAATTAATGAGCCACAGTGATTCACTCCTG  599

seq1  AGTTCTATGGGGGAGATGTTGCTTGAAGTCAGGCAAAAACATGGGAGAGA  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTATGGGGGAGATGTTGCTTGAAGTCAGGCAAAAACATGGGAGAGA  649

seq1  AATATCATTCCAGGGACCTCCAGCCATCCGAGGTGTGCTTTACTTCACAA  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCATTCCAGGGACCTCCAGCCATCCGAGGTGTGCTTTACTTCACAA  699

seq1  AGAAGGGAAGAAAGTTGAAGGGAAGTAAGGTAACTATGTGCTCACTCTTG  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGGAAGAAAGTTGAAGGGAAGTAAGGTAACTATGTGCTCACTCTTG  749

seq1  ATGTTTCTGGGTATCTAGGCCTGAAAAAGGCTGGAGACTCCAGAGAAGCT  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCTGGGTATCTAGGCCTGAAAAAGGCTGGAGACTCCAGAGAAGCT  799

seq1  AATGTTACGATAAACCCCTTAGTGCCTAGTAACATGTTCACAGCATCTTC  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTACGATAAACCCCTTAGTGCCTAGTAACATGTTCACAGCATCTTC  849

seq1  CATTGCCTTCCACCATGCTGGTTGGTTCTTATTTTTGGTCCATGGGAAGC  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCCTTCCACCATGCTGGTTGGTTCTTATTTTTGGTCCATGGGAAGC  899

seq1  AGAAACAGGGTAGGGAAGACAGAGTTCAAGGATGTCACATGGTATTGACA  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAGGGTAGGGAAGACAGAGTTCAAGGATGTCACATGGTATTGACA  949

seq1  TGTGAGGCCCGAGAGGAATCCAGGTGATTCCTCAACCTCTGGACTCCTAG  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGGCCCGAGAGGAATCCAGGTGATTCCTCAACCTCTGGACTCCTAG  999

seq1  CAGGAACATCTGTATAGAAGGCATGGGCTCTCTGGGACCCTTTGGGGGCC  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAACATCTGTATAGAAGGCATGGGCTCTCTGGGACCCTTTGGGGGCC  1049

seq1  ACAGAGAAGTCTTTCTCCAAGAACAAGATCAGTCATCAATTCTTATCAAT  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAAGTCTTTCTCCAAGAACAAGATCAGTCATCAATTCTTATCAAT  1099

seq1  CACAGCTTCCCAACAAGTTGCAAAGACACTGAGGCTGTAATAGGAGAGAA  1136
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCTTCCCAACAAGTTGCAAAGACACTGAGGCTGTAATAGGAGAGAA  1149

seq1  AGAGGATACCAGATATAATGAGGAGAGAATTC  1168
      ||||||||||||||||||||||||||||||||
seq2  AGAGGATACCAGATATAATGAGGAGAGAATTC  1181

seq1: chr6_121289467_121290661
seq2: B6Ng01-338C19.g_65_1251

seq1  GAATTCACATTCAATTTTCAGATGTGGATAACTCCATGTATCCTGCCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATTCAATTTTCAGATGTGGATAACTCCATGTATCCTGCCCAC  50

seq1  ACAGTTTTATGACAGGGATCAAATGAAGTCAGGGGCCCAAGTATTCTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTTATGACAGGGATCAAATGAAGTCAGGGGCCCAAGTATTCTTTT  100

seq1  AGTCCGGTTTTGGGTTCAAGCGAGGGAGATAAATGCTGGCTGACAGGCGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCGGTTTTGGGTTCAAGCGAGGGAGATAAATGCTGGCTGACAGGCGG  150

seq1  AGATGATGGAGATTTGAGAAATGTGGCTGGTGTGCTCAGAGTCTGTCAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGATGGAGATTTGAGAAATGTGGCTGGTGTGCTCAGAGTCTGTCAAC  200

seq1  ACTGTTTCGTTTTTGCTTTGTTTTGTTTTGAAACAGGACCCCAGTCTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTCGTTTTTGCTTTGTTTTGTTTTGAAACAGGACCCCAGTCTTAG  250

seq1  CTCAGGCTGTCCTTGAACTCACTATATAGTTCAGGGTGGCCTTGAACTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGCTGTCCTTGAACTCACTATATAGTTCAGGGTGGCCTTGAACTCA  300

seq1  CAGAGATCCTCTTGCCTCAACTTCCCAAGTGTTGAAATTATAGATGTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATCCTCTTGCCTCAACTTCCCAAGTGTTGAAATTATAGATGTGAG  350

seq1  CGACCAAGCCTAGCTATAGTCAGAGTTGGGAGCTATGGTACTTGAGTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACCAAGCCTAGCTATAGTCAGAGTTGGGAGCTATGGTACTTGAGTTTG  400

seq1  GCTTTGGCTGAGGTAGAGGCATAGGTGAGGTGAAGGACTGAGGATAGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGGCTGAGGTAGAGGCATAGGTGAGGTGAAGGACTGAGGATAGCTG  450

seq1  TGTCCCTATCTGTATGGGGCAGAGACTGGATCCTGCAGTTCCCCAAAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTATCTGTATGGGGCAGAGACTGGATCCTGCAGTTCCCCAAAGAA  500

seq1  AGCAAGGCAGGGAGGGGAGGCTACACAGAGAGGTCGGCAGGCAAGCACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGGCAGGGAGGGGAGGCTACACAGAGAGGTCGGCAGGCAAGCACTA  550

seq1  GGAGAGATAATCTGAGTGCAGGAGGCAGAAGCATAGGGGAAACTGGCACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGATAATCTGAGTGCAGGAGGCAGAAGCATAGGGGAAACTGGCACC  600

seq1  TGAGAAGATGCCCATGGCACCAGGAAGGCACTTACTAATCCCTGAGCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGATGCCCATGGCACCAGGAAGGCACTTACTAATCCCTGAGCCCA  650

seq1  CTAGGCTACCTGGAGAACTCAACTGCCCAAGGTTCAGACCCAGGCACATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCTACCTGGAGAACTCAACTGCCCAAGGTTCAGACCCAGGCACATC  700

seq1  TCACAACCCCGGCCATCCCTAGACAGTGTGCACATAAGCACAGGTCACCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAACCCCGGCCATCCCTAGACAGTGTGCACATAAGCACAGGTCACCT  750

seq1  GGGCAACCTTCTTAATAGAGGCTTGCAGCCTATTTTGGATCTCAACCCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAACCTTCTTAATAGAGGCTTGCAGCCTATTTTGGATCTCAACCCTC  800

seq1  ACATTCAATAACAGGCAAACTATTCTGTGATCTTGTTTCTCCTCTAAACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCAATAACAGGCAAACTATTCTGTGATCTTGTTTCTCCTCTAAACT  850

seq1  ATGCTAAAACTACTGCTTACCCCACAGCCTCACCAGACTCCAGCAGAAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAAAACTACTGCTTACCCCACAGCCTCACCAGACTCCAGCAGAAAC  900

seq1  AGGCACCCAGGAAGCACTCTGGGTAAACACTTCCATTTACTGTGGCTGCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACCCAGGAAGCACTCTGGGTAAACACTTCCATTTACTGTGGCTGCA  950

seq1  CCCCAGCAGTCGCTCTCCTCATAGCAGAAAAGCCCTGGAGGTGTCCAGGA  1000
      |||||||||||||||| |||||||||| ||||||||||||||||||||||
seq2  CCCCAGCAGTCGCTCT-CTCATAGCAG-AAAGCCCTGGAGGTGTCCAGGA  998

seq1  CAGCATACCACCCCTTAGTCTCAGGAAGAAGGATGCGCATTTACTTAGCT  1050
      ||||||||||||||||||||||||  |||  |||||||||||||||||||
seq2  CAGCATACCACCCCTTAGTCTCAG--AGA--GATGCGCATTTACTTAGCT  1044

seq1  AAGTGAATTTGCTAGGGAATGAGGAAGAAGTAGCCTCAAATAGCCTGTGG  1100
      ||||||| ||||||||| |||||||||||||||||||||||||||||| |
seq2  AAGTGAA-TTGCTAGGG-ATGAGGAAGAAGTAGCCTCAAATAGCCTGT-G  1091

seq1  TCCAATGGCCCTGGGGCTGGGGCCCTTCAGTCCCTGGTTCTGAGAGAGCA  1150
      | |||||||||| ||||||||   | ||  ||||||| ||||||||||||
seq2  TTCAATGGCCCT-GGGCTGGG---CCTCGATCCCTGGATCTGAGAGAGCA  1137

seq1  --GCGTATG-CTGTCTAAGCAAAGGGA-TGG-ATATGATTGTTTCTCCTG  1195
        ||||||| |||||||||| || ||| ||| ||||||||||||||||||
seq2  ACGCGTATGTCTGTCTAAGCCAACGGAGTGGCATATGATTGTTTCTCCTG  1187

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BAC

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Alignment Information