BAC Information

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BAC

Clone NameB6Ng01-338H19
Chromosome6 (Build37)
Map Location 67,022,631 - 67,023,177
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041916, Tpm3-rs3, LOC627751, Mad2l1, V1rc15, LOC100041941, Aurkb-ps, V1rc14, LOC546901, V1rc12, LOC627833, V1rc11, V1rc10, LOC100042816, LOC546902, V1rc13, EG546903, LOC100042008, 4930597O21Rik, Gng12, LOC100042837, Gadd45a
Downstream geneE230016M11Rik, EG667310, LOC667318, Serbp1, Il12rb2, LOC667324, EG667326, LOC672137, EG209589, LOC100042890, Il23r, Tacstd2, Igk, Igkv2-137, 4930515G16Rik, Igkv1-136, Igkv1-135, LOC723992, EG628006, Igkv14-134-1, Igkv17-134, EG628027, LOC384401, EG628042, EG243423, EG628056, EG628072, Igkv9-129, Igkv9-128, EG243433, Igkv14-126-1, LOC723993, EG628127, ENSMUSG00000050218, EG243431, EG628144, Igkv1-122, EG667435, EG434025, Igkv9-119, Igkv14-118-2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-338H19.g
ACCGA122775
length547
definitionB6Ng01-338H19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gtatgggatgggaggaggaggcgagtggtctcacggggaaggcagtttga
acatattcaaaatcacattctcacagacagccgggggtcacccttaacac
tcccaggctatcaagtgttagtggacacactggaactaatgaggctcata
aggggacaagcagtactaatgagcacaatctagtacaggtgtaccagcgt
gggagcgctagacagcttcacggaacagctggaagaagtacagtagccga
cagccaacagctgctgcccctctgcagcccaccgctgttgtctgtcacac
agaggtgacactccctgcgagttccagaccagagtcagagcatgttggtg
gcagcagagctgggtcattactgacctgacataggagtgtcaggtacatc
agcctgcccacaccttctcagaggtgccccgcctcctggagcttcctgtc
cggtctctcttcacttttcttccacattgctgtaccctgtgtgaggcacg
ccctgcctgctcttttttgggaatgggaatgagggagaggaagggca
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_67022631_67023177
seq2: B6Ng01-338H19.g_79_625

seq1  GTATGGGATGGGAGGAGGAGGCGAGTGGTCTCACGGGGAAGGCAGTTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGGATGGGAGGAGGAGGCGAGTGGTCTCACGGGGAAGGCAGTTTGA  50

seq1  ACATATTCAAAATCACATTCTCACAGACAGCCGGGGGTCACCCTTAACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTCAAAATCACATTCTCACAGACAGCCGGGGGTCACCCTTAACAC  100

seq1  TCCCAGGCTATCAAGTGTTAGTGGACACACTGGAACTAATGAGGCTCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGCTATCAAGTGTTAGTGGACACACTGGAACTAATGAGGCTCATA  150

seq1  AGGGGACAAGCAGTACTAATGAGCACAATCTAGTACAGGTGTACCAGCGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGACAAGCAGTACTAATGAGCACAATCTAGTACAGGTGTACCAGCGT  200

seq1  GGGAGCGCTAGACAGCTTCACGGAACAGCTGGAAGAAGTACAGTAGCCGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCGCTAGACAGCTTCACGGAACAGCTGGAAGAAGTACAGTAGCCGA  250

seq1  CAGCCAACAGCTGCTGCCCCTCTGCAGCCCACCGCTGTTGTCTGTCACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAACAGCTGCTGCCCCTCTGCAGCCCACCGCTGTTGTCTGTCACAC  300

seq1  AGAGGTGACACTCCCTGCGAGTTCCAGACCAGAGTCAGAGCATGTTGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTGACACTCCCTGCGAGTTCCAGACCAGAGTCAGAGCATGTTGGTG  350

seq1  GCAGCAGAGCTGGGTCATTACTGACCTGACATAGGAGTGTCAGGTACATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGAGCTGGGTCATTACTGACCTGACATAGGAGTGTCAGGTACATC  400

seq1  AGCCTGCCCACACCTTCTCAGAGGTGCCCCGCCTCCTGGAGCTTCCTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGCCCACACCTTCTCAGAGGTGCCCCGCCTCCTGGAGCTTCCTGTC  450

seq1  CGGTCTCTCTTCACTTTTCTTCCACATTGCTGTACCCTGTGTGAGGCACG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTCTCTCTTCACTTTTCTTCCACATTGCTGTACCCTGTGTGAGGCACG  500

seq1  CCCTGCCTGCTCTTTTTTGGGAATGGGAATGAGGGAGAGGAAGGGCA  547
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCCTGCTCTTTTTTGGGAATGGGAATGAGGGAGAGGAAGGGCA  547