BAC Information

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BAC

Clone NameB6Ng01-339G06
Chromosome6 (Build37)
Map Location 132,457,718 - 132,458,499
singlet/doubletsinglet
Overlap genenone
Upstream gene5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114, LOC639802, EG114600, Prb1, LOC631126, LOC100043878, Prpmp5, EG667929, EG381818
Downstream genePrh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116, Tas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1, Tas2r129, Tas2r131, Tas2r109, EG667992, LOC100043634, Tas2r140, LOC668002, Tas2r141-ps4, 2700089E24Rik, LOC630618, 5530400C23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-339G06.bB6Ng01-339G06.g
ACCGA123398GA123399
length1,179809
definitionB6Ng01-339G06.b B6Ng01-339G06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttacctgaggaatactgaatggctgagaagcatctgaaaaaaat
gttcaacatccttaatcatcagacaaatgcaaattaaaacaaccctgaga
ttccacctcataccagtcagaatggctaagatcaaaaattcagggacagc
agatgctgttgaggatatggtgaaagaggaacactcttccattgatggtg
tgattgcaagtttgttcaaccactctggaaatcagtctggcagttcctca
taaaattggacatagtactactggaggatccagctatacctctcctgggc
atatatccagaagaagttcatccattcttatctccttttacaaagctcaa
gtctaagtggatcaaggaactccacataaaaccaaagacactaaatcgta
tagatgagaatgtgagggaaagtcttgaagatatggggacaggagaaaaa
ttcctgaacagtacaacaatagcctgtgctgtaagatcgagaattgacaa
atgggacatcataaaattgcatagcttctataagacaaaacacactgtga
ataagacaaaatggcaaccaacaaattgggaaaggatctttaccaatctt
aaatcagataggagactaatatccaatatatacaaagaactttagaagct
ggtctccaaaatatcaaataaccctattaaaaaatggggtatagtgctga
acaaagaattttcaactgaggaatattgaatggctgagaagcacctgaaa
gaaatgctcacccgggcatggttgcatgcctttaatcccagcactcggga
ggaagaggcaggcagatttctgagttctaggccagcctggtctacaaagt
gagttccaggatagccagggctgtacaggaaaccatgtctcaaaaaacca
aaaaaaaaaaaattctttaatcatcagggaaatgcaaatcaaaacaaccc
tgagatttcacttcaccaccagtcagaatgggctaagatcaaaaattcac
gacagcagatgctgttgagatgtgtgaaagagacactcttccatgatggt
gtgatgcagtttgtacaccacctctgggaatcagtctgcagtccctcata
aattgacatagtactactgagatcagctataccttctggcaatatatccg
aagagagtgtttctctaacccttgtgcta
gaattcaacgatgccattattttgctcctccttataaagacagccttgct
ccttccagcacacacttggaagaaactccagagcctcttccaagatgctg
gtaatcctgttcacattggtcctgttggccctgagttctgctctaggaac
ctggtgaaggtatgagaatatggggatgggtactgtgactcttcttaaag
aacaggaaacaacagtgcaggtggggcagaaagatgaaaaaaagacagaa
gatgagagatgaatgagagagcacactatttcagtttttaaaaatagcct
cagattataatacactatgctacataaaattaactacatatacctttagc
cttgccgtactgctgatcaagggaagatgacagaattacacatataacag
atatttggagaaaggtatctgaagtaataaacttgaaactattatacaga
aaaatagtaacttcttcccaaatttcaattttccacactcattcacaatt
ccaatatattatcagtgggtgtttaatcattcattccaatatttattcat
ataccttttcattgagaagacagaaaggtgaaggataagaattaagtaag
gaagagatatatattttagattacatagagatagaaaaatagatagatag
atgataaatagatgatagatgatagatagatagatagatagatagataga
tagatagatagatagatgatagacagacagacagacagacagacagatag
atagatagatgatagatagatagatgatagatagatagatagatagatag
atagatgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_132457718_132458499
seq2: B6Ng01-339G06.g_64_872

seq1  GAATTCAACGATGCCATTATTTTGCTCCTCCTTATAAAGACAGCCTTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACGATGCCATTATTTTGCTCCTCCTTATAAAGACAGCCTTGCT  50

seq1  CCTTCCAGCACACACTTGGAAGAAACTCCAGAGCCTCTTCCAAGATGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCAGCACACACTTGGAAGAAACTCCAGAGCCTCTTCCAAGATGCTG  100

seq1  GTAATCCTGTTCACATTGGTCCTGTTGGCCCTGAGTTCTGCTCTAGGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCCTGTTCACATTGGTCCTGTTGGCCCTGAGTTCTGCTCTAGGAAC  150

seq1  CTGGTGAAGGTATGAGAATATGGGGATGGGTACTGTGACTCTTCTTAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGAAGGTATGAGAATATGGGGATGGGTACTGTGACTCTTCTTAAAG  200

seq1  AACAGGAAACAACAGTGCAGGTGGGGCAGAAAGATGAAAAAAAGACAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGAAACAACAGTGCAGGTGGGGCAGAAAGATGAAAAAAAGACAGAA  250

seq1  GATGAGAGATGAATGAGAGAGCACACTATTTCAGTTTTTAAAAATAGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGAGATGAATGAGAGAGCACACTATTTCAGTTTTTAAAAATAGCCT  300

seq1  CAGATTATAATACACTATGCTACATAAAATTAACTACATATACCTTTAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTATAATACACTATGCTACATAAAATTAACTACATATACCTTTAGC  350

seq1  CTTGCCGTACTGCTGATCAAGGGAAGATGACAGAATTACACATATAACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCGTACTGCTGATCAAGGGAAGATGACAGAATTACACATATAACAG  400

seq1  ATATTTGGAGAAAGGTATCTGAAGTAATAAACTTGAAACTATTATACAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGGAGAAAGGTATCTGAAGTAATAAACTTGAAACTATTATACAGA  450

seq1  AAAATAGTAACTTCTTCCCAAATTTCAATTTTCCACACTCATTCACAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGTAACTTCTTCCCAAATTTCAATTTTCCACACTCATTCACAATT  500

seq1  CCAATATATTATCAGTGGGTGTTTAATCATTCATTCCAATATTTATTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATATATTATCAGTGGGTGTTTAATCATTCATTCCAATATTTATTCAT  550

seq1  ATACCTTTTCATTGAGAAGACAGAAAGGTGAAGGATAAGAATTAAGTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTTTTCATTGAGAAGACAGAAAGGTGAAGGATAAGAATTAAGTAAG  600

seq1  GAAGAGATATATATTTTAGATTACATAGAGATAGAAAAATAGATAGATAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGATATATATTTTAGATTACATAGAGATAGAAAAATAGATAGATAG  650

seq1  ATGATAAATAGATGATAGATGATAGATAGATAGATAGATAGATAGATAGA  700
      ||||||||||||||||||||    ||||||||||||||||||||||||||
seq2  ATGATAAATAGATGATAGAT----GATAGATAGATAGATAGATAGATAGA  696

seq1  TAGATAGATAGATAGATAGATGATAGACAGACAGACAGACAGACAGACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGATAGATAGATAGATGATAGACAGACAGACAGACAGACAGACAG  746

seq1  ATAGATAGATAGATGATAGATAGATAGATGAT------------------  782
      ||||||||||||||||||||||||||||||||                  
seq2  ATAGATAGATAGATGATAGATAGATAGATGATAGATAGATAGATAGATAG  796

seq1  -------------  782
                   
seq2  ATAGATAGATGAT  809