MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-340E19
Chromosome	6 (Build37)
Map Location	3,069,680 - 3,070,902
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100039885, LOC100039896
Downstream gene	LOC100040185, EG667335, Samd9l, AI987662, Ccdc132, Calcr, LOC100039942, Tfpi2, Gngt1, Gng11, 4930528H21Rik, Bet1
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100039885 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039885
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC100039896 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039896
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	LOC100040185 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins pseudo : _no_value

name	EG667335 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667335 MGI:3647057
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins pseudo : _no_value

name	Samd9l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:209086 MGI:1343184
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 96 ESTs, 4 Proteins

name	AI987662 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:101202 MGI:2141520
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccdc132 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73288 MGI:1920538
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Calcr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12311 MGI:101950
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100039942 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039942
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Tfpi2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21789 MGI:108543
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gngt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14699 MGI:109165
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gng11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66066 MGI:1913316
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930528H21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78034 MGI:1925284
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Bet1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12068 MGI:1343104
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Samd9l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94377053 GeneID:209086 MGI:1343184
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 96 ESTs, 4 Proteins product : sterile alpha motif domain containing 9-like, transcript variant 1 transcript_id : XM_620286.3

name	AI987662 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375470 GeneID:101202 MGI:2141520
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI987662 transcript_id : NM_178899.4

name	Ccdc132 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353064 GeneID:73288 MGI:1920538
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 132 transcript_id : NM_024260.4

name	Calcr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112181178 GeneID:12311 MGI:101950
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcitonin receptor transcript_id : NM_007588.2

name	Calcr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112181168 GeneID:12311 MGI:101950
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcitonin receptor transcript_id : NM_001042725.1

name	Tfpi2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382435 GeneID:21789 MGI:108543
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tissue factor pathway inhibitor 2 transcript_id : NM_009364.3

name	Gngt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366390 GeneID:14699 MGI:109165
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 transcript_id : NM_010314.2

name	Gng11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254516 GeneID:66066 MGI:1913316
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : guanine nucleotide binding protein (G protein), gamma 11 transcript_id : NM_025331.2

name	4930528H21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254848 GeneID:78034 MGI:1925284
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930528H21 gene transcript_id : XM_001474660.1

name	Bet1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542222 GeneID:12068 MGI:1343104
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : blocked early in transport 1 homolog (S. cerevisiae) transcript_id : NM_009748.2

name	Samd9l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63540653 GeneID:209086 MGI:1343184
definition	codon_start : 1 product : sterile alpha motif domain containing 9-like isoform 1 protein_id : XP_620286.1

name	AI987662 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30725744 GeneID:101202 MGI:2141520
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] codon_start : 1 product : hypothetical protein LOC101202 protein_id : NP_849230.1

name	Ccdc132 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62751932 GeneID:73288 MGI:1920538
definition	codon_start : 1 exception : mismatches in translation note : Bcl2-like product : coiled-coil domain containing 132 protein_id : NP_077222.3

name	Calcr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112181169 GeneID:12311 MGI:101950
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform b precursor is encoded by transcript variant b product : calcitonin receptor isoform b precursor protein_id : NP_001036190.1

name	Calcr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112181179 GeneID:12311 MGI:101950
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform a precursor is encoded by transcript variant a product : calcitonin receptor isoform a precursor protein_id : NP_031614.2

name	Tfpi2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678311 CCDS:CCDS19892.1 GeneID:21789 MGI:108543
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]; GO:0030414 - protease inhibitor activity [Evidence IEA]; GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA] GO_process : GO:0007596 - blood coagulation [Evidence IEA] codon_start : 1 product : tissue factor pathway inhibitor 2 protein_id : NP_033390.1

name	Gngt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33563258 GeneID:14699 MGI:109165
definition	GO_component : GO:0005834 - heterotrimeric G-protein complex [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003924 - GTPase activity [Evidence ISS]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0005083 - small GTPase regulator activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : guanine nucleotide binding protein (G protein), gamma 1 subunit product : guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 protein_id : NP_034444.1

name	Gng11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384698 GeneID:66066 MGI:1913316
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : guanine nucleotide binding protein gamma 11 protein_id : NP_079607.1

name	4930528H21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254849 GeneID:78034 MGI:1925284
definition	codon_start : 1 product : hypothetical protein LOC78034 protein_id : XP_001474710.1

name	Bet1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753182 CCDS:CCDS19895.1 GeneID:12068 MGI:1343104
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0000139 - Golgi membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA] [Evidence ISS]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0016192 - vesicle-mediated transport [Evidence TAS] codon_start : 1 note : golgi vesicular membrane trafficking protein p18 product : blocked early in transport 1 homolog protein_id : NP_033878.1

name	LOC100039885 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039885
definition	number : 2 pseudo : _no_value

name	LOC100039885 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039885
definition	number : 1 pseudo : _no_value

name	LOC100039896 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039896
definition	number : 1 pseudo : _no_value

name	LOC100039942 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039942
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:271733
definition	standard_name : PMC18810P1

name	(CDS detail)
type	STS
link
xref	UniSTS:273240
definition	standard_name : PMC350564P1

name	(CDS detail)
type	STS
link
xref	UniSTS:270439
definition	standard_name : PMC123151P1

name	(CDS detail)
type	STS
link
xref	UniSTS:270982
definition	standard_name : PMC140912P1

name	(CDS detail)
type	STS
link
xref	UniSTS:271251
definition	standard_name : PMC153210P1

name	(CDS detail)
type	STS
link
xref	UniSTS:271203
definition	standard_name : PMC152246P1

name	(CDS detail)
type	STS
link
xref	UniSTS:143011
definition	standard_name : AA175286

name	(CDS detail)
type	STS
link
xref	UniSTS:165450
definition	standard_name : AI987662

name	(CDS detail)
type	STS
link
xref	UniSTS:122786
definition	standard_name : 04.MMHAP6FLB1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:116580
definition	standard_name : D6Mit231

name	(CDS detail)
type	STS
link
xref	UniSTS:207921
definition	standard_name : C87205

name	(CDS detail)
type	STS
link
xref	UniSTS:224970
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:495961
definition	standard_name : Calcr

name	(CDS detail)
type	STS
link
xref	UniSTS:179336
definition	standard_name : AV000670

name	(CDS detail)
type	STS
link
xref	UniSTS:235382
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:185653
definition	standard_name : AW555236

name	LOC100040185 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254843 GeneID:100040185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins product : similar to COX11 homolog, cytochrome c oxidase assembly protein (yeast) pseudo : _no_value transcript_id : XR_031747.1

name	EG667335 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149254835 GeneID:667335 MGI:3647057
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins product : predicted gene, EG667335 pseudo : _no_value transcript_id : XR_002008.2

clone name	MSMg01-477M07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-198H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339N23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-495N24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-421O03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-490L03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-532P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216N16
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-340E19.b	B6Ng01-340E19.g
ACC	GA124044	GA124045
length	1,200	1,238
definition	B6Ng01-340E19.b	B6Ng01-340E19.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctccttctgacccatatctgctgaccacacctctccagcaagtgc ctctgctgctggccagctcaaggtttgcccacctggacctgaagcaccgt gttttggagttgggaggaactgtttggcattgttggcagaaggtgtgcct ggagcagcagcctttttaattctggagaccctgtagtcctttgtatctca gacctttactgatgtaccaggtcccagattctgtggcaggggttggggtg gggtgtgcttgccagacgaaatttaaattatctatcttttggaaagtgtg tgctttcctggaggtctctgagaaaacaaacaaacaaatcaggtcagtta accccttaatgcccacttaaactcaatttcatattagactcttatttaaa accatttgtggcctgtgtgtgttaatcctggttaaagagaaagctttatg acactgtttctgttcaacacattaaccagttgtggaacagcccttttttg catgacaggcagggcacttcaggattcgcagagagactcttgtggtttgg aaggggtatttcctatgaaagtctctcacgttgcttgtaaagctaatcta attaaaaagatgtataaatgttcttgaaaaaattgtaaaaagaaagaaaa aaagaaagaaagaaagaaagaaagaaagagaaagaaagaaagaaagaacg aaagaaagaaaatgagatcctatcaagtgggtaagagagccaccatgata agaaattccagaatattctagatcagatgtatcacagcctcctttgggaa gtccctctattcacacttcctctctttcttctctgtcctacccagctttg ttctcttttttacaggacagccatttagaaataattacagtatctgatca cagagtttcggagacataaacattctctcataaagaaactagtccccatt tttcctggttggcctacttatctgaccttccttctgtctactgagagttg acacagtattatggcagagctcacaggatctagctgtgtttcccttcatg tagtgactcacacagtatgagtagtgacatagaagaacagacttatggat gcagaatgactggtagagatgaagagaataacagagatctgatactgtgc agcaggttaggatagattaccatccagattcattgacatgctaacctggc	gaattctacgtaactaaggggtcatgtcctattatttggcaatgtacccg gttcattctgaggttgttccaggaggcccttatctcaaaaatgttcttgg aacagtctttagttgggagggttcgaactctagggtgaggagttcaggaa tgcattctggggtgaagagttcaggagtgttctgggaacaatctctagat gggaggggtcgggctctggggtgaggaagagttcagtaattttttatctt tattcttcattccccactccttttagaaaatagctctaatcttagagcga gttttcaacctcttggaggacccgatattgttgccttagtaccataacct gtactgcatttatcctttctctaataaaagctaccaacttattaaggatg caggggccaaaagtaagcaaaagcataagtgtaattaaaggtcctgctat ggtggagaggagagtggtgagccaaggggacttattaaaccagctttcga accatccttgttggctttctctttctcttttacgtatatctaggcgttct ctaagtttggccatagaatctttgattactcctgaatggtcaacataaaa acaacattcttcttttagggcagcacagagtcctccttctttaaggaata ataagtctaatccccttctattctgtagcaccacttcggacagggaagtt aaagattcttctaatttggttatagactgttctatagttctaagatcaac atccatagctgcacgtagttcttcatagtattggggggtcttcattaagg cagcggttcctgtacctactccagccgctactcccaatcctaatagaact gccaaagttaaaggtaacgggttctcttctccagcggacccgatgctcaa atttgtctaaaaaggtgctatcatcatcatacaggagtctaggaataagc tgaaccaaaatgcagaaatctttgggaactataaaaacagacatagacca caacaggagtgagacctggtatgcagcccacactgtgtctagggggggcc accagatactgacccacttttgcctagactggatgttcctggtcttgatt acgaggtgccctttattcttgaggtaccaggccagaccaggccctccttt ccggaacctggcctgctgattccacttctgttctcctccaaggcaattga gaagtgactcgtgagatataatattattagctgctgta
quality values	Open. Hide. 58 47 31 31 62 62 62 62 46 46 62 62 49 49 43 39 62 44 29 62 62 54 62 59 59 62 62 62 59 59 59 36 62 62 49 49 62 62 62 62 59 49 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 59 62 62 49 49 49 49 54 62 59 62 49 54 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 56 62 37 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 46 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 54 62 62 62 62 62 58 54 58 58 58 58 47 46 58 58 58 46 52 58 58 58 58 58 58 58 58 58 58 58 49 58 54 58 58 58 58 54 58 58 58 58 54 53 58 58 58 58 58 54 58 58 54 54 54 54 51 46 50 58 58 58 58 58 54 39 58 54 47 53 54 58 49 58 58 46 58 58 58 58 58 58 58 58 58 58 41 47 58 51 50 48 58 58 58 58 58 58 58 58 58 58 43 43 58 58 58 58 58 58 58 58 58 49 58 58 58 51 58 58 58 38 35 58 58 58 49 58 58 58 51 58 54 58 50 58 58 58 54 58 14 22 44 58 40 43 43 43 39 44 54 58 39 58 44 58 58 58 51 58 58 58 52 33 33 58 50 41 51 58 51 38 41 42 54 52 52 45 43 39 38 53 42 54 49 44 39 42 54 34 54 51 54 42 52 49 25 40 44 35 45 53 39 32 32 54 53 54 54 38 37 53 29 52 32 42 54 52 45 39 39 53 53 40 42 32 41 37 40 37 32 45 32 53 35 26 38 40 37 45 32 32 46 38 51 31 53 33 49 52 42 53 45 32 34 34 34 29 49 49 37 52 31 33 24 31 32 29 34 23 34 28 15 30 53 51 45 45 36 42 51 22 30 30 30 31 38 31 30 46 29 28 33 24 30 28 51 40 30 31 31 45 51 30 42 32 30 31 31 30 32 46 46 46 48 31 25 30 16 31 31 31 22 34 32 31 22 26 38 48 34 34 27 38 48 27 30 22 26 31 31 29 32 26 33 31 27 30 26 36 34 36 35 28 31 31 21 32 43 28 32 47 19 21 18 20 39 19 26 8 12 13 17 36 28 16 14 15 41 33 36 32 31 21 19 31 23 44 30 31 27 43 22 31 32 34 16 32 33 38 28 17 27 31 44 47 48 32 23 22 21 28 25 21 14 30 25 13 19 15 43 14 25 30 18 29 34 32 32 34 18 12 13 18 17 30 28 23 32 24 33 17 32 20 21 31 32 34 24 18 20 17 4 14 20 34 12 7 14 23 28 21 34 32 11 20 31 17 12 4 5 17 29 12 24 28 20 17 16 8 14 8 11 3 9 6 16 11 11 11 5 4 9 5 34 25 9 34 17 17 20 22 20 24 27 8 25 12 18 19 21 14 9 6 26 15 7 19 6 21 10 16 16 20 28 13 27 17 7 7 9 7 17 6 31 3 4 12 6 4 16 8 12 7 10 20 9 5 7 20 8 8 4 18 4 7 17 6 24 6 8 12 9 7 1 2 2 6 13 7 7 15 5 8 11 12 9 9 4 6 5 5 5 8 7 7 12 3 6 8 6 9 15 6 5 18 4 4 4 15 5 8 5 7 10 14 4 9 7 6 17 5 7 3 8 6 8 4 6 4 4 3 3 1 4 8 12 12 7 6 2 1 3 2 12 5 6 5 6 4 3 4 14 5 5 2 5 5 5 9 13 4 6 6 2	Open. Hide. 62 47 39 44 62 62 62 56 54 56 37 46 56 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 46 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 48 62 62 62 62 62 62 62 58 58 45 54 54 58 58 58 58 58 58 58 58 58 58 48 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 52 58 58 58 54 54 45 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 54 58 58 54 58 58 58 58 58 58 58 45 39 58 54 58 58 53 58 47 41 58 58 58 58 58 58 40 49 49 54 54 51 47 47 58 58 58 51 58 47 50 53 45 58 51 51 51 54 58 54 58 46 50 50 49 48 46 54 58 51 58 51 50 58 58 58 42 50 36 58 35 37 53 52 49 38 41 51 52 58 50 49 54 53 53 50 50 49 44 50 34 58 49 32 51 33 41 52 40 50 52 39 49 50 49 50 50 51 53 39 58 50 40 14 27 44 50 44 40 50 50 41 41 43 41 51 37 53 31 52 32 40 43 33 35 58 50 38 50 52 51 32 42 32 58 39 44 49 37 39 51 32 54 51 42 39 25 49 39 31 54 52 39 28 40 42 49 44 51 39 31 52 39 45 35 45 41 30 42 54 53 29 39 42 45 45 53 39 42 54 41 40 24 51 40 33 26 34 32 39 35 38 53 32 39 27 39 33 42 45 52 52 42 23 35 34 33 42 37 37 41 40 52 35 33 33 45 33 34 39 42 33 37 42 53 52 49 49 46 19 32 32 34 35 29 37 31 25 25 15 39 18 40 31 45 31 47 32 31 31 34 26 52 31 28 18 38 31 33 45 40 33 35 26 33 31 45 30 31 35 32 34 31 18 46 30 13 41 31 35 31 30 33 25 21 31 24 32 26 26 39 43 33 30 16 51 37 34 31 37 11 51 18 33 32 18 19 33 27 16 46 32 24 31 30 29 31 46 29 24 28 22 27 24 31 30 22 24 37 19 46 30 17 31 30 31 31 38 32 24 40 26 31 46 32 26 23 31 26 27 46 32 41 13 9 8 10 39 27 31 31 32 32 27 38 32 22 38 32 27 31 26 31 26 23 25 32 18 31 37 32 27 11 18 17 32 19 19 30 23 29 32 27 29 30 17 24 22 38 44 27 21 34 15 9 11 30 48 20 30 23 19 48 34 10 41 10 31 19 24 27 11 19 5 41 33 32 26 24 7 16 34 22 7 18 13 12 11 7 5 6 17 5 6 7 6 4 5 20 13 23 9 7 7 16 10 15 5 23 30 13 17 29 7 8 25 6 6 26 12 10 17 14 18 15 10 6 21 14 18 15 28 27 39 39 39 40 47 33 11 10 19 6 30 10 8 15 6 8 13 20 28 27 15 28 10 17 8 27 38 38 21 13 10 13 7 4 8 15 12 22 18 14 5 5 25 9 16 4 6 6 18 13 4 5 6 8 6 22 6 9 6 7 7 5 5 14 5 7 11 29 14 11 28 14 5 7 5 4 6 14 5 7 11 22 6 6 10 13 11 12 14 17 11 2 3 6 7 4 22 6 4 14 19 19 6 7 4 4 16 12 12 9 7 3 15 17 4 6 13 12 8 7 10 6 6 8 6 3 3 4 9 8 8 19 5 17 15 4 4 7 1 3 2 16 5 4 7 23 16 5 7 9 8 5 8 6 7 17 4 2 3 14 22 6 7 4 4 4 20 9 16 6 4 3 2 3 4 8 7 6 4 8 5 16 11 3 4 4 18 6 1 2 3 7 1 2 3 4

Alignment Information

BAC End 1

BAC End 2

seq1: chr6_3069680_3070902
seq2: B6Ng01-340E19.b_49_1248 (reverse)

seq1  GCCAGGTGAGCATTGTCAATGAATCTCTGGATGGTAGAAATCTATCCTCA  50
      ||||||| |||| ||||||||||  ||||||||||   |||||||||| |
seq2  GCCAGGTTAGCA-TGTCAATGAA--TCTGGATGGT---AATCTATCCT-A  43

seq1  ACCTGCTTGCACAGTATCCAGAATCTCTTGGTTA-TCTC-TCATCTCTAA  98
      |||||| |||||||||| ||| ||||||  |||| |||| ||||||||| 
seq2  ACCTGC-TGCACAGTAT-CAG-ATCTCT--GTTATTCTCTTCATCTCTAC  88

seq1  CAATGTCATCCTGGCATTCATAAGGTCTGTTCTCTAATGTCACTACTCAT  148
      ||  ||||| || |||| ||||| |||||||||   ||||||||||||||
seq2  CA--GTCATTCT-GCATCCATAA-GTCTGTTCTTCTATGTCACTACTCAT  134

seq1  ACTGTGTTGAGTCACTACCATGAAGGGAAACACAAGCTAGGTTCCTGTGA  198
      |||||| |||||||||| ||||||||||||||| ||||| | ||||||||
seq2  ACTGTG-TGAGTCACTA-CATGAAGGGAAACAC-AGCTA-GATCCTGTGA  180

seq1  GCTCTGGCCATAATACTGTGTTCAACCTCTCAGTAGACAGAAGGAAGGTC  248
      ||||| |||||||||||||| |||| ||||||||||||||||||||||||
seq2  GCTCT-GCCATAATACTGTG-TCAA-CTCTCAGTAGACAGAAGGAAGGTC  227

seq1  AGATAAGTTAGGCCAACCAGGAAAAATGGGGACTAGTTTCTTTATGAGAG  298
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAG-TAGGCCAACCAGGAAAAATGGGGACTAGTTTCTTTATGAGAG  276

seq1  AATGTTTATTGTCTCCGAAACTCTGTGATCAGATACTGTAATTATTTCTA  348
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTA-TGTCTCCGAAACTCTGTGATCAGATACTGTAATTATTTCTA  325

seq1  AATGGCTGTCCTGTAAAAAAGAGAACAAAGCTGGGTAGGACAGAGAAGAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCTGTCCTGTAAAAAAGAGAACAAAGCTGGGTAGGACAGAGAAGAA  375

seq1  AGAGAGGAAGTGTGAATAGAGGGACTTCCCAAAGGAGGCTGTGATACATC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGAAGTGTGAATAGAGGGACTTCCCAAAGGAGGCTGTGATACATC  425

seq1  TGATCTAGAATATTCTGGAATTTCTTATCATGGTGGCTCTCTTACCCACT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTAGAATATTCTGGAATTTCTTATCATGGTGGCTCTCTTACCCACT  475

seq1  TGATAGGATCTCATTTTCTTTCTTTCGTTCTTTCTTTCTTTCTTTCTCTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGGATCTCATTTTCTTTCTTTCGTTCTTTCTTTCTTTCTTTCTCTT  525

seq1  TCTTTCTTTCTTTCTTTCTTTCTTTTTTTCTTTCTTTTTACAATTTTTTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTCTTTCTTTCTTTCTTTTTTTCTTTCTTTTTACAATTTTTTC  575

seq1  AAGAACATTTATACATCTTTTTAATTAGATTAGCTTTACAAGCAACGTGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACATTTATACATCTTTTTAATTAGATTAGCTTTACAAGCAACGTGA  625

seq1  GAGACTTTCATAGGAAATACCCCTTCCAAACCACAAGAGTCTCTCTGCGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTTTCATAGGAAATACCCCTTCCAAACCACAAGAGTCTCTCTGCGA  675

seq1  ATCCTGAAGTGCCCTGCCTGTCATGCAAAAAAGGGCTGTTCCACAACTGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGAAGTGCCCTGCCTGTCATGCAAAAAAGGGCTGTTCCACAACTGG  725

seq1  TTAATGTGTTGAACAGAAACAGTGTCATAAAGCTTTCTCTTTAACCAGGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTGTTGAACAGAAACAGTGTCATAAAGCTTTCTCTTTAACCAGGA  775

seq1  TTAACACACACAGGCCACAAATGGTTTTAAATAAGAGTCTAATATGAAAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACACACACAGGCCACAAATGGTTTTAAATAAGAGTCTAATATGAAAT  825

seq1  TGAGTTTAAGTGGGCATTAAGGGGTTAACTGACCTGATTTGTTTGTTTGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTAAGTGGGCATTAAGGGGTTAACTGACCTGATTTGTTTGTTTGT  875

seq1  TTTCTCAGAGACCTCCAGGAAAGCACACACTTTCCAAAAGATAGATAATT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAGAGACCTCCAGGAAAGCACACACTTTCCAAAAGATAGATAATT  925

seq1  TAAATTTCGTCTGGCAAGCACACCCCACCCCAACCCCTGCCACAGAATCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTCGTCTGGCAAGCACACCCCACCCCAACCCCTGCCACAGAATCT  975

seq1  GGGACCTGGTACATCAGTAAAGGTCTGAGATACAAAGGACTACAGGGTCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCTGGTACATCAGTAAAGGTCTGAGATACAAAGGACTACAGGGTCT  1025

seq1  CCAGAATTAAAAAGGCTGCTGCTCCAGGCACACCTTCTGCCAACAATGCC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAATTAAAAAGGCTGCTGCTCCAGGCACACCTTCTGCCAACAATGCC  1075

seq1  AAACAGTTCCTCCCAACTCCAAAACACGGTGCTTCAGGTCCAGGTGGGCA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTTCCTCCCAACTCCAAAACACGGTGCTTCAGGTCCAGGTGGGCA  1125

seq1  AACCTTGAGCTGGCCAGCAGCAGAGGCACTTGCTGGAGAGGTGTGGTCAG  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTGAGCTGGCCAGCAGCAGAGGCACTTGCTGGAGAGGTGTGGTCAG  1175

seq1  CAGATATGGGTCAGAAGGAGAATTC  1223
      |||||||||||||||||||||||||
seq2  CAGATATGGGTCAGAAGGAGAATTC  1200

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information