BAC Information

Click to search

BAC

Clone NameB6Ng01-340H23
Chromosome6 (Build37)
Map Location 130,924,901 - 130,925,876
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667764, Klra6, LOC100038893, LOC100038894, LOC100038895, Klra4, LOC667769, LOC100038897, Klra8, EG654449, Klra9, Klra7, LOC100038898, Klra12, Klra10, Klra13, Klra3, Klra1, LOC100038902, LOC100038903, LOC625436, EG625473, LOC640779, LOC667793, EG667798, EG625558, LOC625566, EG636947, LOC625628
Downstream geneEG625648, LOC667830, EG434094, Klra2, LOC434095, 2010012C16Rik, Styk1, Csda, LOC625758, 5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-340H23.bB6Ng01-340H23.g
ACCGA124186GA124187
length991994
definitionB6Ng01-340H23.b B6Ng01-340H23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggaattcaagcctgacttgggcaggtgaatttgaatcaaaata
gcatgattataatatgtgtgaaataaggtaaagcaggagtgaaatataca
gaaatcagatggcaaagggaggatcttcaacagtcaacaactttattgag
ccttagattagttgggagaaacaggcttatcaaatttaccataagaaaaa
ttcgaaggacaaatggccaagcagcccatgaatcatagacaaaacaggta
aaatatagtaggaataaggatacacaatagccagccatgagacatggtga
gtgctgtcaatacaggattgtgatgaacatagaataataggaaagggatc
ctacagtcactaactattcacagatacataagaagcacatagtctgaatc
atgacctcttgactttacctcacttagtgatgctcacatacatctctacc
caagaaacacaaggtaggctcctgattctcatgtttccaaatctgaaatg
ctgacacaacaggcatgtgtacctgtcctgttcttttgttcttgaacaat
acctagcataactattttaaatgtgtcattttgtaatcccagtatctgag
tccttaaggattgaatgtactgttgctgcaggctttttcctcatggtgac
atttttttgtgtctttcaatgtgtatcttttcactggtacagaaaactat
ctgactcagaaacaaaccagttgctcactgggttgtttagcagctaatac
tgtaacaagtgtagaggttatggcacccttcccactggagaaaaatgctt
gctgaagccacagaaaaccttcaatcaattgagccttcctttactaaaaa
cttaaagtctagaataattaccatgaacaggttgcaacagtaaatgggga
agagttcttgtagcatagccaaggtctatgaagatctatttaatcaggac
gaacgtttgcttctcaaccttctggtatgtcataccaaatt
gaattcttctgtgaatcatttttttgtgaggacaaagaaattgtgtttga
gagagccaaggttatacttcctcctgtagctggatttgataatgtgttta
aatcatgcaggtggtactcattttgaaagtatgaaggggtcatggagggc
agctgagtcttgacacggtgaaaggccaggaaagacccattgctaatggt
tcagtctcagttgcagttgatggcccatgactgtggggggttcacacaaa
gaaattgaggtttcgttccataaagagcctataagaggctattgttgaag
cctaatttcagcagaagacctcagcatactggagagtccagtatcatggg
atagccaccaagaacagcaggagtggtggaatggagtcaaccacaatcta
gaatgctacaaagagcagagctggtgaagtgatgcaagtcctttgtagaa
acaaagaagttcatgagtggatcccggatattggaaactgtgtaaggtgg
gaagttgctcacagggagtggaaccagcccaggctaaagaagttgttgca
gtacacaaatacaaaaagggaattcgagatttgaacactgcttttatatg
agacatagagatgcatagttggagttgcccagctggtttcctatcttcat
tagttctagtatttcctcaatatggaatataggaaagtttttaaatgtct
tataatgttggaggtatgtgattgctgtttgattttgttttttaagtgat
tgaatctcagaaaagactttgaaatttggacttttaacattgttgacaat
gctatactatagggacttttgaagttggaacaaatgcatttttcattttg
tcatgcttatgtatgtcacccatagactcatgtgtttgaacaagtctttg
gagctagggagaggtgtagagtggtttgaatatccttggactatggagtt
gccactattagaaagtgtgcctggttggaattaaggtgtgtctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_130924901_130925876
seq2: B6Ng01-340H23.b_49_1038

seq1  GAATTCAGGAATTCAAGCCTGACTTGGGCAGGTGAATTTGAATCAAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAATTCAAGCCTGACTTGGGCAGGTGAATTTGAATCAAAATA  50

seq1  GCATGATTATAATATGTGTGAAATAAGGTAAAGCAGGAGTGAAATATACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGATTATAATATGTGTGAAATAAGGTAAAGCAGGAGTGAAATATACA  100

seq1  GAAATCAGATGGCAAAGGGAGGATCTTCAACAGTCAACAACTTTATTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCAGATGGCAAAGGGAGGATCTTCAACAGTCAACAACTTTATTGAG  150

seq1  CCTTAGATTAGTTGGGAGAAACAGGCTTATCAAATTTACCATAAGAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGATTAGTTGGGAGAAACAGGCTTATCAAATTTACCATAAGAAAAA  200

seq1  TTCGAAGGACAAATGGCCAAGCAGCCCATGAATCATAGACAAAACAGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGAAGGACAAATGGCCAAGCAGCCCATGAATCATAGACAAAACAGGTA  250

seq1  AAATATAGTAGGAATAAGGATACACAATAGCCAGCCATGAGACATGGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAGTAGGAATAAGGATACACAATAGCCAGCCATGAGACATGGTGA  300

seq1  GTGCTGTCAATACAGGATTGTGATGAACATAGAATAATAGGAAAGGGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGTCAATACAGGATTGTGATGAACATAGAATAATAGGAAAGGGATC  350

seq1  CTACAGTCACTAACTATTCACAGATACATAAGAAGCACATAGTCTGAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGTCACTAACTATTCACAGATACATAAGAAGCACATAGTCTGAATC  400

seq1  ATGACCTCTTGACTTTACCTCACTTAGTGATGCTCACATACATCTCTACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCTCTTGACTTTACCTCACTTAGTGATGCTCACATACATCTCTACC  450

seq1  CAAGAAACACAAGGTAGGCTCCTGATTCTCATGTTTCCAAATCTGAAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAACACAAGGTAGGCTCCTGATTCTCATGTTTCCAAATCTGAAATG  500

seq1  CTGACACAACAGGCATGTGTACCTGTCCTGTTCTTTTGTTCTTGAACAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACACAACAGGCATGTGTACCTGTCCTGTTCTTTTGTTCTTGAACAAT  550

seq1  ACCTAGCATAACTATTTTAAATGTGTCATTTTGTAATCCCAGTATCTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGCATAACTATTTTAAATGTGTCATTTTGTAATCCCAGTATCTGAG  600

seq1  TCCTTAAGGATTGAATGTACTGTTGCTGCAGGC-TTTTCCTCATGGTGAC  649
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCCTTAAGGATTGAATGTACTGTTGCTGCAGGCTTTTTCCTCATGGTGAC  650

seq1  ATTTTTTTGTGTCTTTCAATGTGTATCTTTTCACTGGTACAG-AAACTAT  698
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATTTTTTTGTGTCTTTCAATGTGTATCTTTTCACTGGTACAGAAAACTAT  700

seq1  CTGACTCAGAAACAAACCAGTTGCTCACTGGGTTGTTTAGCAGCTAATAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTCAGAAACAAACCAGTTGCTCACTGGGTTGTTTAGCAGCTAATAC  750

seq1  TGTAACAAGTGTAGAGGTTATGGCA-CCTTCCCACTGGAG-AAAATGCTT  796
      ||||||||||||||||||||||||| |||||||||||||| |||||||||
seq2  TGTAACAAGTGTAGAGGTTATGGCACCCTTCCCACTGGAGAAAAATGCTT  800

seq1  GCTGAAGCCACAGAAAA-CTTCAATCAATTGAG-CTTCC-TTACTAAAAA  843
      ||||||||||||||||| ||||||||||||||| ||||| ||||||||||
seq2  GCTGAAGCCACAGAAAACCTTCAATCAATTGAGCCTTCCTTTACTAAAAA  850

seq1  CTT-AAGTCTAGAAGTAGTTA-CATGAACA-GTTGCAACAGT-AATGGGG  889
      ||| |||||||||| || ||| |||||||| ||||||||||| |||||||
seq2  CTTAAAGTCTAGAA-TAATTACCATGAACAGGTTGCAACAGTAAATGGGG  899

seq1  AAGAGTTC-TGTAGCATAGCCAAGGTCTATGAAGATCTA-TTAATCAGGA  937
      |||||||| |||||||||||||||||||||||||||||| ||||||||||
seq2  AAGAGTTCTTGTAGCATAGCCAAGGTCTATGAAGATCTATTTAATCAGGA  949

seq1  TGAACGTTTGC-TCTC-AGCTTCTGGTATGTCATACCAAAT  976
       |||||||||| |||| | ||||||||||||||||||||||
seq2  CGAACGTTTGCTTCTCAACCTTCTGGTATGTCATACCAAAT  990