BAC Information

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BAC

Clone NameB6Ng01-341H01
Chromosome6 (Build37)
Map Location 17,920,408 - 18,053,792
singlet/doubletdoublet
Overlap geneWnt2, Asz1
Upstream geneTes, EG232599, Cav2, Cav1, Met, Capza2, St7
Downstream geneLOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7, LOC626180
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341H01.bB6Ng01-341H01.g
ACCGA124820GA124821
length1911,111
definitionB6Ng01-341H01.b B6Ng01-341H01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(17,920,408 - 17,920,598)(18,052,678 - 18,053,792)
sequence
ctcctctgactttccttaatgaaggattgtgatcagaatgtataagccaa
aattaactccttcctcctcaagtttgttttggtcagtgttttgtcacaat
gacagaaagtaattagaacagaaattggtaccaaagagttggttggtcga
ggtgaatggtggatggatggtggatggtgcatagtagaaag
gaattcaacataatttagaggtgcaaaagagcctttgctaagatggtgag
atatgcatggagagatagagatgggaagaggttgagaattttaaagttca
gtacatgcttaggatggtaaagaaggcaattagaagcacttcctaatgtg
tgaggacttctttgcttttccactcatatagacaagttaaccattttgat
aagtgcttgttctgctcgtggctcagaggagcaagtcttgaaatgtgtag
agttactactttcaagaaatgcggacccaaatactgcttgtaggtaagag
cctctctttttcaaatactctatcaacctgttatacatgtgataaaatga
atatttaaaggtcaataacattgtttgcttggccaaatggtgaatgaaaa
tgcgtcataaagtcacagttccattgactattattatcaaaaggagataa
catgagggcaaacttttggtaaatttgaaattacaaagtaacagaactat
aaatcttatttcctgtgaatcatagtctcacaagaacatgtttgttgagt
gatgtatggtagtaaagttgctcaagtgtttctctccaggtgagaattaa
gagtttgggtctggcacagtgcttggcaattatgtcgtgaatgtactgct
cctgcggatgactcgaggtcagttcccagaaccacagctcacagcaaact
ctgtcttcagttccagggaatccaaacactcttttctggacctcataggc
acttgcacacacatccaccccccccacacacacacacataatatgtatac
acataagtaaatcaatgactaaataagtatttcttaagagaattctttta
tttattaccaatactaagaaaatgcataaaagtatttccctttttcctac
actttatcagttggtcagggtattggtatatatgggatagtactatatac
aaacagtaaatgaaccacatatatgtgaaaatcactaatataaaaataga
tttacttgaaaaaatgttagttggcctcctggctggacttattttctagt
catttttcacttaatctctccttttcttttagcctaatcctcaaataagc
aggtaggaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_17920408_17920598
seq2: B6Ng01-341H01.b_49_239

seq1  CTCCTCTGACTTTCCTTAATGAAGGATTGTGATCAGAATGTATAAGCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTGACTTTCCTTAATGAAGGATTGTGATCAGAATGTATAAGCCAA  50

seq1  AATTAACTCCTTCCTCCTCAAGTTTGTTTTGGTCAGTGTTTTGTCACAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAACTCCTTCCTCCTCAAGTTTGTTTTGGTCAGTGTTTTGTCACAAT  100

seq1  GACAGAAAGTAATTAGAACAGAAATTGGTACCAAAGAGTTGGTTGGTCGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAAAGTAATTAGAACAGAAATTGGTACCAAAGAGTTGGTTGGTCGA  150

seq1  GGTGAATGGTGGATGGATGGTGGATGGTGCATAGTAGAAAG  191
      |||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAATGGTGGATGGATGGTGGATGGTGCATAGTAGAAAG  191

seq1: chr6_18052678_18053792
seq2: B6Ng01-341H01.g_66_1176 (reverse)

seq1  AATTCCTACTTTCTTTATTTTTAAGATTA-GCTAAAAGAAAAGGAGAGAT  49
      ||||||||| | |||   ||| | ||||| ||||||||||||||||||||
seq2  AATTCCTACCTGCTT--ATTTGAGGATTAGGCTAAAAGAAAAGGAGAGAT  48

seq1  TTAGTAGAAAAATTGACTAGAAAATAAAGTCAGGCAAGAAGCCAACTAAA  99
      | ||| |||||| ||||||||||||||   ||| || || ||||||||| 
seq2  TAAGT-GAAAAA-TGACTAGAAAATAAGTCCAGCCAGGAGGCCAACTAAC  96

seq1  ACATTTTTTTCAAGT-AATCTATTTTTATTATTAGTGAATTTTCAACATA  148
      |   ||||||||||| |||||||||||| |||||||| |||||| |||||
seq2  A---TTTTTTCAAGTAAATCTATTTTTA-TATTAGTG-ATTTTC-ACATA  140

seq1  TATGTGGTTCATTTACTGTTTGTATATAGTACTATCCCATATATA-CAAT  197
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TATGTGGTTCATTTACTGTTTGTATATAGTACTATCCCATATATACCAAT  190

seq1  AACCTGACCAACTGATAAAGTTGTAGG-AAAAGGGAAATACTTTTATGCA  246
      | |||||||||||||||||| |||||| ||||||||||||||||||||||
seq2  ACCCTGACCAACTGATAAAG-TGTAGGAAAAAGGGAAATACTTTTATGCA  239

seq1  TTTTCTTAGTATTGGT-ATAAATAAAAGAATTCTCTTAAGAAATACTTAT  295
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTTTCTTAGTATTGGTAATAAATAAAAGAATTCTCTTAAGAAATACTTAT  289

seq1  TTAGTCATTGATTTACTTATGTGTATACATATTATGTGTGTGTGTGT-GG  344
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTAGTCATTGATTTACTTATGTGTATACATATTATGTGTGTGTGTGTGGG  339

seq1  GGGGGTGGATGTGTGTGCAAGTGCCTATGAGGTCCAGAAAAGAGTG-TTG  393
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GGGGGTGGATGTGTGTGCAAGTGCCTATGAGGTCCAGAAAAGAGTGTTTG  389

seq1  GATTCCCTGGAACTGAAGACAGAGTTTGCTGTGAGCTGTGGTTCTGGGAA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCCTGGAACTGAAGACAGAGTTTGCTGTGAGCTGTGGTTCTGGGAA  439

seq1  CTGACCTCGAGTCATCCGCAGGAGCAGTACATTCACGACATAATTGCCAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCTCGAGTCATCCGCAGGAGCAGTACATTCACGACATAATTGCCAA  489

seq1  GCACTGTGCCAGACCCAAACTCTTAATTCTCACCTGGAGAGAAACACTTG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGTGCCAGACCCAAACTCTTAATTCTCACCTGGAGAGAAACACTTG  539

seq1  AGCAACTTTACTACCATACATCACTCAACAAACATGTTCTTGTGAGACTA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACTTTACTACCATACATCACTCAACAAACATGTTCTTGTGAGACTA  589

seq1  TGATTCACAGGAAATAAGATTTATAGTTCTGTTACTTTGTAATTTCAAAT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCACAGGAAATAAGATTTATAGTTCTGTTACTTTGTAATTTCAAAT  639

seq1  TTACCAAAAGTTTGCCCTCATGTTATCTCCTTTTGATAATAATAGTCAAT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAAAAGTTTGCCCTCATGTTATCTCCTTTTGATAATAATAGTCAAT  689

seq1  GGAACTGTGACTTTATGACGCATTTTCATTCACCATTTGGCCAAGCAAAC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTGTGACTTTATGACGCATTTTCATTCACCATTTGGCCAAGCAAAC  739

seq1  AATGTTATTGACCTTTAAATATTCATTTTATCACATGTATAACAGGTTGA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTATTGACCTTTAAATATTCATTTTATCACATGTATAACAGGTTGA  789

seq1  TAGAGTATTTGAAAAAGAGAGGCTCTTACCTACAAGCAGTATTTGGGTCC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTATTTGAAAAAGAGAGGCTCTTACCTACAAGCAGTATTTGGGTCC  839

seq1  GCATTTCTTGAAAGTAGTAACTCTACACATTTCAAGACTTGCTCCTCTGA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCTTGAAAGTAGTAACTCTACACATTTCAAGACTTGCTCCTCTGA  889

seq1  GCCACGAGCAGAACAAGCACTTATCAAAATGGTTAACTTGTCTATATGAG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACGAGCAGAACAAGCACTTATCAAAATGGTTAACTTGTCTATATGAG  939

seq1  TGGAAAAGCAAAGAAGTCCTCACACATTAGGAAGTGCTTCTAATTGCCTT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAGCAAAGAAGTCCTCACACATTAGGAAGTGCTTCTAATTGCCTT  989

seq1  CTTTACCATCCTAAGCATGTACTGAACTTTAAAATTCTCAACCTCTTCCC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACCATCCTAAGCATGTACTGAACTTTAAAATTCTCAACCTCTTCCC  1039

seq1  ATCTCTATCTCTCCATGCATATCTCACCATCTTAGCAAAGGCTCTTTTGC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTATCTCTCCATGCATATCTCACCATCTTAGCAAAGGCTCTTTTGC  1089

seq1  ACCTCTAAATTATGTTGAATTC  1115
      ||||||||||||||||||||||
seq2  ACCTCTAAATTATGTTGAATTC  1111