BAC Information

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BAC

Clone NameB6Ng01-342K08
Chromosome6 (Build37)
Map Location 140,672,161 - 140,673,293
singlet/doubletsinglet
Overlap genenone
Upstream genePik3c2g, Plcz1, Capza3, LOC100042680, LOC100039020, LOC269810, Plekha5, Aebp2
Downstream geneEG664868, LOC664875, Pde3a, Slco1c1, Slco1b2, EG435927
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-342K08.bB6Ng01-342K08.g
ACCGA125667GA125668
length1,1911,137
definitionB6Ng01-342K08.b B6Ng01-342K08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaagataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttccttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacttcccttagttagagtcaacgccgagatattttatatt
atttgtgactattgagaagggtgttgtttccctatttctttcctcagcct
gtttatctttggtatagagaaaggccattgactggttgagtttatttata
tccaggctaacttcacgaagctgtttatcaaggtttagcagtccctggta
gaattttgaggtcactaattatactatccaatcactggcaaagagtgaat
ctggaactcctcttacaatggataccttgaactcctgtggt
gaattcccttcaggctccattctgagatgtgattaagtccatttactgtt
tcttatctttcataacatcaattcacttgtacttaccctgaagatttttt
tatagaatttattgtttattcatttgcacaaacattgtggattgtgaaga
ataatcttaaaaatcatgtgtctgtgtgtgtgtgtgtgtatgtgtgtcac
atattaaggtcaaagaaaaatttttttttggtgttttctttaattacatt
tcaaatgttttcccctttccaggtcttcccttcagaagcccctatcccat
actccctccccctgctcctctaccctcctacccactcccatcctcctgcc
ctggcattcccctacactggggcatcaaacaccctcaggctcaaggccct
cttctcccactgatgtccaataaagccatcttctgccacatatgtggcca
gtgccatgggttgctctatgtgtcttctttggttggtggtccagtccctg
ggagctccaggggggtcgggcctgttgacactgttgttcccttcatgggg
ctgcaaaccccctcagctctttgaatcccttctccaactcctccatcgtg
gaccctggagctcagtccaatggttggctgtgagctccctcctctgtatt
tgttaggagacagccatatcaggcttctatcagcaagcactttccagcat
ccacagtagcgtccaggtttggaatatgggatggatccccaagtggggca
gtctctggatggcctttccttcagtctctgctccacactgtctccatatt
ttctcctgtgagcattctgttcaccctcaaaggaacaactttaagaagtc
agttcttgcctttccaccatgtgagccctggggttttgaacttcaggtct
tcaaggcttggcagcaggcacctttacccacaccttccctgtacgccttt
ctaactgagttcatatgaggctctcagaccaagtagcatgtctacacctc
atgattgtactattctctccacaggagtaaagctaacggtatgacgatcc
tcagcgtggttgagaagctgaggtttggggttggggcacacttgtcaacc
gtttctgcagtccagacaggtggagaaggtagcttgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_140672161_140673293
seq2: B6Ng01-342K08.g_70_1206

seq1  GAATTCCCTTCAGGCTCCATTCTGAGATGTGATTAAGTCCATTTACTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTCAGGCTCCATTCTGAGATGTGATTAAGTCCATTTACTGTT  50

seq1  TCTTATCTTTCATAACATCAATTCACTTGTACTTACCCTGAAGATTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATCTTTCATAACATCAATTCACTTGTACTTACCCTGAAGATTTTTT  100

seq1  TATAGAATTTATTGTTTATTCATTTGCACAAACATTGTGGATTGTGAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAATTTATTGTTTATTCATTTGCACAAACATTGTGGATTGTGAAGA  150

seq1  ATAATCTTAAAAATCATGTGTCTGTGTGTGTGTGTGTGTATGTGTGTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTTAAAAATCATGTGTCTGTGTGTGTGTGTGTGTATGTGTGTCAC  200

seq1  ATATTAAGGTCAAAGAAAAATTTTTTTTTGGTGTTTTCTTTAATTACATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAGGTCAAAGAAAAATTTTTTTTTGGTGTTTTCTTTAATTACATT  250

seq1  TCAAATGTTTTCCCCTTTCCAGGTCTTCCCTTCAGAAGCCCCTATCCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGTTTTCCCCTTTCCAGGTCTTCCCTTCAGAAGCCCCTATCCCAT  300

seq1  ACTCCCTCCCCCTGCTCCTCTACCCTCCTACCCACTCCCATCCTCCTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCTCCCCCTGCTCCTCTACCCTCCTACCCACTCCCATCCTCCTGCC  350

seq1  CTGGCATTCCCCTACACTGGGGCATCAAACACCCTCAGGCTCAAGGCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCATTCCCCTACACTGGGGCATCAAACACCCTCAGGCTCAAGGCCCT  400

seq1  CTTCTCCCACTGATGTCCAATAAAGCCATCTTCTGCCACATATGTGGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCCCACTGATGTCCAATAAAGCCATCTTCTGCCACATATGTGGCCA  450

seq1  GTGCCATGGGTTGCTCTATGTGTCTTCTTTGGTTGGTGGTCCAGTCCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCATGGGTTGCTCTATGTGTCTTCTTTGGTTGGTGGTCCAGTCCCTG  500

seq1  GGAGCTCCAGGGGGGTCGGGCCTGTTGACACTGTTGTTCCCTTCATGGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTCCAGGGGGGTCGGGCCTGTTGACACTGTTGTTCCCTTCATGGGG  550

seq1  CTGCAAACCCCCTCAGCTCTTTGAATCCCTTCTCCAACTCCTCCATCGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAACCCCCTCAGCTCTTTGAATCCCTTCTCCAACTCCTCCATCGTG  600

seq1  GACCCTGGAGCTCAGTCCAATGGTTGGCTGTGAGCTCCCTCCTCTGTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTGGAGCTCAGTCCAATGGTTGGCTGTGAGCTCCCTCCTCTGTATT  650

seq1  TGTTAGGAGACAGCCATATCAGGCTTCTATCAGCAAGCACTTTCCAGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGGAGACAGCCATATCAGGCTTCTATCAGCAAGCACTTTCCAGCAT  700

seq1  CCACAGTAGCGTCCAGGTTTGGAATATGGGATGGATCCCCAAGTGGGGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTAGCGTCCAGGTTTGGAATATGGGATGGATCCCCAAGTGGGGCA  750

seq1  GTCTCTGGATGGCCTTTCCTTCAGTCTCTGCTCCACACTGTCTCCATATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGGATGGCCTTTCCTTCAGTCTCTGCTCCACACTGTCTCCATATT  800

seq1  TTCTCCTGTGAGCATTCTGTTCACCCTCAAAGGAACAACTTTAAGAAGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTGTGAGCATTCTGTTCACCCTCAAAGGAACAACTTTAAGAAGTC  850

seq1  AGTTCTTGCC-TTCCACCATGTGAGCCCT-GGGTTTTGAAC-TCAGGTCT  897
      |||||||||| |||||||||||||||||| ||||||||||| ||||||||
seq2  AGTTCTTGCCTTTCCACCATGTGAGCCCTGGGGTTTTGAACTTCAGGTCT  900

seq1  TC-AGGCTTGGCAGCAGGCACCTTTACCCACACC-TCCCTGTACGCCTTT  945
      || ||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCAAGGCTTGGCAGCAGGCACCTTTACCCACACCTTCCCTGTACGCCTTT  950

seq1  CTAACTGAGTTCATATGAGGCTCTCAGACCAAGTAGCATGTCTACACCTC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTGAGTTCATATGAGGCTCTCAGACCAAGTAGCATGTCTACACCTC  1000

seq1  ATGATTGTTACTATTCTCTCCACAGGAGTAAAGCTAACGGTATGACGAT-  1044
      ||||||| ||||||||||||||||||||||||||||||||||||||||| 
seq2  ATGATTG-TACTATTCTCTCCACAGGAGTAAAGCTAACGGTATGACGATC  1049

seq1  CTCAGCGGTGTGTGAGGAGCTTGAGGTT--GGGGTGGGGCACACTTGTCA  1092
      |||||| |||  |||| ||| |||||||  ||| ||||||||||||||||
seq2  CTCAGC-GTGGTTGAGAAGC-TGAGGTTTGGGGTTGGGGCACACTTGTCA  1097

seq1  AACGTTTCTGCAGTCCAGCAGGGGTGGAGAGGTTAGCTTGC  1133
      | |||||||||||||||| |  |||||||| | ||||||||
seq2  ACCGTTTCTGCAGTCCAG-ACAGGTGGAGAAGGTAGCTTGC  1137