BAC Information

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BAC

Clone NameB6Ng01-344G07
Chromosome6 (Build37)
Map Location 128,513,779 - 128,514,445
singlet/doubletsinglet
Overlap geneBC048546
Upstream geneEfcab4b, Prmt8, Tspan11, Tspan9, LOC100043853, LOC667560, Tead4, LOC652986, Tulp3, 5930416I19Rik, Foxm1, Nrip2, Itfg2, Fkbp4, EG667598, Pzp, LOC384494, EG667610
Downstream geneKlrb1a, EG545878, LOC677440, Clec2h, LOC100043863, LOC100043861, Klrb1c, LOC100043862, Klrb1d, LOC667706, Clec2i, Clec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1, Clec2d, Cd69, 4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik, Gabarapl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344G07.bB6Ng01-344G07.g
ACCGA126893GA126894
length1,304667
definitionB6Ng01-344G07.b B6Ng01-344G07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaggaaataatcaaatgcagggctgaaatcaaccaagtagaaaca
aaaagaactatacaaagaatcaaccaaaccaggagctggttctttgagaa
aatcaacaagataggtaaactcttaacaagactcactagagggcataggg
ccagtatcctaattaataagatcagaaataaatagggagttaaaacaata
gaatctaaggaaatccaaagcatcttcagatccttctacaaaagcctata
ctcaagaaaactgaaaaacctgggtgaaatggacaattttctagacagat
aagaggtaccaaagttaaatcaggatcagattaacaatctgaacagtccc
atatcccctaaaaaaatagaagcagtcattaatagtctcctgaccgaaaa
aagcccaggaccagatgggtttagtgcagagttctatcagaccttcaaaa
gagaccgaattccaattcttgctaactgaatcaaagaacacatcacaacg
atcaaccatcatgatcaagtagggttcattccagggatgcagggatggtt
taatatacagaaatccatcaatgtaatccactatataaacaaactcaaag
acaaataccatatgatcatctcattagatgctgagaaagcatttgacaaa
atccaacacccatttatgataaaagtcttggaaagatcaggaattcaagg
tccatacctgaacataagagcaacatacagcaaaacagtagccagcatca
aactaaatagagagaagctggaagcaatcccactaaaatcagggactaga
catggctgcccactttctccctacctattcaatatagcacttgaagtcat
agccagagcaattagacaacaaaaggaggccaaggggatccaaattggaa
aggaagaagtcaaaatattactatttgcagatgagatgatagtatatata
agtgatcctaaaaattccaccagagaactcttaaacctgataaacagctt
caatgagtagctggatataaaattaactcaagcaaatcagtggcctttct
ctacacaaaggataaacaggatgagaagaattagaggaaacaacaccctt
caccatagtcacaaattattataaaataccttggtgttgactcctgacta
gatgaggatctgtatgataagaacttcagtctcctgagagatccaaggtt
ctcagaagaatgggaagattccatgtctatggaatgcagatacaaatatg
gtaatggctatctttggaatgagagcaatcctcacagaattcacatgggc
aatc
gaattcttgtgccctttgaggaagctagctgagaatacgatttatgtacc
tgaaaggtgacctggaaactgggatagctcagggagcaatagagaaacac
ggctgtaagcaggatgtgttctcccaaggaaggaaggaaagatcaacttt
aaggtgagaaagagcttgtcactggctagggtcactggctattacttaga
atgactggctgggattcataattaaacaagaaaaaaatgaagctatatta
ttctcgagaaaatcactacaataaaatttcaaagctgtgtgtgatgacct
agacttttaatgtcagcacccagaggcagcagcgggttaggagcattggc
tgctcttccagagaacctgggctcgatttccagtgtgcatagatgtatat
acagagataacattcatacacataaaataataaagtattttatcttattc
tcttaagaaatgtagcagagctggttattcacaagtcactagaagctcat
gtttctctctttgtaaagataggccaaggtgaggatgctgctgtccccat
tgtgtaattctgtgctggaatcaggcaaagagagaacagaggcgtgcaat
gaaaaggaaggaagcaagtgggggaaagaaggaaagggggaagggaagaa
ggaagaaagggaggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_128513779_128514445
seq2: B6Ng01-344G07.g_65_731

seq1  GAATTCTTGTGCCCTTTGAGGAAGCTAGCTGAGAATACGATTTATGTACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTGCCCTTTGAGGAAGCTAGCTGAGAATACGATTTATGTACC  50

seq1  TGAAAGGTGACCTGGAAACTGGGATAGCTCAGGGAGCAATAGAGAAACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGTGACCTGGAAACTGGGATAGCTCAGGGAGCAATAGAGAAACAC  100

seq1  GGCTGTAAGCAGGATGTGTTCTCCCAAGGAAGGAAGGAAAGATCAACTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTAAGCAGGATGTGTTCTCCCAAGGAAGGAAGGAAAGATCAACTTT  150

seq1  AAGGTGAGAAAGAGCTTGTCACTGGCTAGGGTCACTGGCTATTACTTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGAGAAAGAGCTTGTCACTGGCTAGGGTCACTGGCTATTACTTAGA  200

seq1  ATGACTGGCTGGGATTCATAATTAAACAAGAAAAAAATGAAGCTATATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTGGCTGGGATTCATAATTAAACAAGAAAAAAATGAAGCTATATTA  250

seq1  TTCTCGAGAAAATCACTACAATAAAATTTCAAAGCTGTGTGTGATGACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCGAGAAAATCACTACAATAAAATTTCAAAGCTGTGTGTGATGACCT  300

seq1  AGACTTTTAATGTCAGCACCCAGAGGCAGCAGCGGGTTAGGAGCATTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTTAATGTCAGCACCCAGAGGCAGCAGCGGGTTAGGAGCATTGGC  350

seq1  TGCTCTTCCAGAGAACCTGGGCTCGATTTCCAGTGTGCATAGATGTATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTCCAGAGAACCTGGGCTCGATTTCCAGTGTGCATAGATGTATAT  400

seq1  ACAGAGATAACATTCATACACATAAAATAATAAAGTATTTTATCTTATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGATAACATTCATACACATAAAATAATAAAGTATTTTATCTTATTC  450

seq1  TCTTAAGAAATGTAGCAGAGCTGGTTATTCACAAGTCACTAGAAGCTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAGAAATGTAGCAGAGCTGGTTATTCACAAGTCACTAGAAGCTCAT  500

seq1  GTTTCTCTCTTTGTAAAGATAGGCCAAGGTGAGGATGCTGCTGTCCCCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCTCTTTGTAAAGATAGGCCAAGGTGAGGATGCTGCTGTCCCCAT  550

seq1  TGTGTAATTCTGTGCTGGAATCAGGCAAAGAGAGAACAGAGGCGTGCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAATTCTGTGCTGGAATCAGGCAAAGAGAGAACAGAGGCGTGCAAT  600

seq1  GAAAAGGAAGGAAGCAAGTGGGGGAAAGAAGGAAAGGGGGAAGGGAAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGAAGGAAGCAAGTGGGGGAAAGAAGGAAAGGGGGAAGGGAAGAA  650

seq1  GGAAGAAAGGGAGGAAG  667
      |||||||||||||||||
seq2  GGAAGAAAGGGAGGAAG  667