BAC Information

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BAC

Clone NameB6Ng01-345P07
Chromosome6 (Build37)
Map Location 94,501,838 - 94,610,571
singlet/doubletdoublet
Overlap geneSlc25a26, Lrig1
Upstream geneLOC665831, Magi1, LOC100043262, LOC665856
Downstream geneLOC625941, EG665865, LOC100043276, LOC100043680, Kbtbd8, LOC435912, Suclg2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-345P07.bB6Ng01-345P07.g
ACCGA127992GA127993
length1,0621,110
definitionB6Ng01-345P07.b B6Ng01-345P07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,501,838 - 94,502,901)(94,609,477 - 94,610,571)
sequence
gaattctgggttgttaacttcctccattatctgctccatatcaaactaga
ttgactggctactgtgttgggagtccgaggactccgctctgctctctttc
catttgccagttgtttttaggtgtgtttgatctacaatagcgagggactt
gaactgtacttagtgtggtgtttgaatgagttctccaggtggtggaattg
tttggaaaggaccagggggtgtggcctcctggaggatgaaagggattttc
ttagagaaggccttggctttgttgttgctcatgcttatttttattgttct
taagatctaaaactcagtaagggtttccatctgtccctttggggatggca
ccatggcttgtgccgtgtcccagtgttctgaaaaagagtgcctttcctat
ttcattaaaaacctatctgggacagtagcatttactggagagaaaatgga
agaagtctgataccactgtgaactaacggagcaggacttgtgctgacatg
cctgatgctgccgtgattgctggccagcatgcatgcttccactgtagtgt
cctgttggtcccatctctgcctccatgggtgttgggggctttccccagca
ctgtgtagattttattttacaattcacttctggatttctaagcatatttg
gggataatggcaatttaaaatactctaagtttcttttcatctgtaagtaa
aagcctctccaggtttagtattggatcaatcttaaggtgcaagaatcaaa
tggcagatttactctctcctcagatatttaaatctgaaatgtacagtaga
gcttatttttagaagagaaaaagaaaagcgaaaatcagtactcttggtaa
ggtggaaactgacttatttttgaaatttttcctcaaaattgccactttct
gtgagtcagtcatgggccctgccttttgttttaaagtgagtgtgaagtta
gtgtgtatactggctggttttgtatgcccaacttgacacagcctgagtta
tcacagagaaagagctcagttgggaaatgcctcatggagatcagctgtgg
ggcattttctca

gaattctggtaaatcctggtgactcaaagaggtaccagcagtgagtggtg
gaaactaggtaagaatatggaaggggaaaaaaccaaaccaaaccaaaaca
aaacaacacaacacagcccacagttgacacaccagtgcttccaaattaac
tgggctcaagtcggttctcccggaccttgcggtcttcagagccaaaggcg
ggtgcaggagttgtggtggcttagcagtggtttaattttagaggctctag
aaccacataacattgtgggttgggaagagagagagaaagcaagccctttg
gaggctcctggaggacatgtgcagctgcttccaagccacagctctccact
gctcacaaccctgaggaaagcccatcagggagtgccctaacccggagtgc
tggacaccgagtcctctataatcagagggctatttatacagtcctctatg
aaaaggcccttggatcacattactgtggtggcttgggggtgcttgctact
aagctgctttgctggggccactgccctacacgcttcctggagagggtaag
ggagccctgccttcaggtatttatggctcagctctgctctgtccatgctg
ctgctctttctctcaccctgctgtgtgcatgcacaagaacaggtgcagag
ggttgggatggctgtgacgtgaaggaagactgaactactgaggagtgttt
gatagactgcggctgttagttaatagctaatagctgttattgctattagt
gctgactgataagtatttcccatgtaagtatccacagcctaaacttttag
atttatttctcctggatcctgccaaagccccatgactctggtacatgtat
tatttacattttttttttaaaagaggaagactaaagttcagcaaaggtta
ggtggcatgctgaggatcattgattggtacggagtagaagaatcgctctt
cttgttttttttaacatctgttggctgtatgaccaacatgcctcctgaca
ttgtatttgagtggtactccctggaaggactggtgtgttactcagacttt
ggacagagctgggaaccacacctcatctttcacccttctttgtcatattg
cgaactatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_94501838_94502901
seq2: B6Ng01-345P07.b_50_1111

seq1  GAATTCTGGGTTGTTAACTTCCTCCATTATCTGCTCCATATCAAACTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGTTGTTAACTTCCTCCATTATCTGCTCCATATCAAACTAGA  50

seq1  TTGACTGGCTACTGTGTTGGGAGTCCGAGGACTCCGCTCTGCTCTCTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTGGCTACTGTGTTGGGAGTCCGAGGACTCCGCTCTGCTCTCTTTC  100

seq1  CATTTGCCAGTTGTTTTTAGGTGTGTTTGATCTACAATAGCGAGGGACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGCCAGTTGTTTTTAGGTGTGTTTGATCTACAATAGCGAGGGACTT  150

seq1  GAACTGTACTTAGTGTGGTGTTTGAATGAGTTCTCCAGGTGGTGGAATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGTACTTAGTGTGGTGTTTGAATGAGTTCTCCAGGTGGTGGAATTG  200

seq1  TTTGGAAAGGACCAGGGGGTGTGGCCTCCTGGAGGATGAAAGGGATTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAAGGACCAGGGGGTGTGGCCTCCTGGAGGATGAAAGGGATTTTC  250

seq1  TTAGAGAAGGCCTTGGCTTTGTTGTTGCTCATGCTTATTTTTATTGTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGAAGGCCTTGGCTTTGTTGTTGCTCATGCTTATTTTTATTGTTCT  300

seq1  TAAGATCTAAAACTCAGTAAGGGTTTCCATCTGTCCCTTTGGGGATGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATCTAAAACTCAGTAAGGGTTTCCATCTGTCCCTTTGGGGATGGCA  350

seq1  CCATGGCTTGTGCCGTGTCCCAGTGTTCTGAAAAAGAGTGCCTTTCCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGCTTGTGCCGTGTCCCAGTGTTCTGAAAAAGAGTGCCTTTCCTAT  400

seq1  TTCATTAAAAACCTATCTGGGACAGTAGCATTTACTGGAGAGAAAATGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTAAAAACCTATCTGGGACAGTAGCATTTACTGGAGAGAAAATGGA  450

seq1  AGAAGTCTGATACCACTGTGAACTAACGGAGCAGGACTTGTGCTGACATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTCTGATACCACTGTGAACTAACGGAGCAGGACTTGTGCTGACATG  500

seq1  CCTGATGCTGCCGTGATTGCTGGCCAGCATGCATGCTTCCACTGTAGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATGCTGCCGTGATTGCTGGCCAGCATGCATGCTTCCACTGTAGTGT  550

seq1  CCTGTTGGTCCCATCTCTGCCTCCATGGGTGTTGGGGGCTTTCCCCAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTGGTCCCATCTCTGCCTCCATGGGTGTTGGGGGCTTTCCCCAGCA  600

seq1  CTGTGTAGATTTTATTTTACAATTCACTTCTGGATTTCTAAGCATATTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTAGATTTTATTTTACAATTCACTTCTGGATTTCTAAGCATATTTG  650

seq1  GGGATAATGGCAATTTAAAATACTCTAAGTTTCTTTTCATCTGTAAGTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAATGGCAATTTAAAATACTCTAAGTTTCTTTTCATCTGTAAGTAA  700

seq1  AAGCCTCTCCAGGTTTAGTATTGGATCAATCTTAAGGTGCAAGAATCAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTCTCCAGGTTTAGTATTGGATCAATCTTAAGGTGCAAGAATCAAA  750

seq1  TGGCAGATTTACTCTCTCCTCAGGATATTTAAATCTGAAATGTACAGTAG  800
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TGGCAGATTTACTCTCTCCTCA-GATATTTAAATCTGAAATGTACAGTAG  799

seq1  AGCTTATTTTTAGAAGAGAAAAAGAAAAGCGAAAATCAGTACTCTTGGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTATTTTTAGAAGAGAAAAAGAAAAGCGAAAATCAGTACTCTTGGTA  849

seq1  AGGTGGAAACTGACTTA-TTTTGAAATTTTTCCTCAAAATTGCCACTTTC  899
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGGTGGAAACTGACTTATTTTTGAAATTTTTCCTCAAAATTGCCACTTTC  899

seq1  TGTGAGTCAGTCAT-GGCCCTGCCTTTTGTTTTAAAGTGAGTGTGAAGTT  948
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TGTGAGTCAGTCATGGGCCCTGCCTTTTGTTTTAAAGTGAGTGTGAAGTT  949

seq1  AGTGTGTATACTGGCTGGTTTTGTATG-CCAACTTGACACAGGCTGGAGT  997
      ||||||||||||||||||||||||||| |||||||||||||| || ||||
seq2  AGTGTGTATACTGGCTGGTTTTGTATGCCCAACTTGACACAGCCT-GAGT  998

seq1  TATCACAGAGAAAGGAGCTTCAGTTGGGGAAATGCCTCCATGAGATCAGC  1047
      ||||||||||||| |||| |||||| ||||||||||||   |||||||||
seq2  TATCACAGAGAAA-GAGC-TCAGTT-GGGAAATGCCTCATGGAGATCAGC  1045

seq1  TGTGGGGCATTTTCTCA  1064
      |||||||||||||||||
seq2  TGTGGGGCATTTTCTCA  1062


seq1: chr6_94609477_94610571
seq2: B6Ng01-345P07.g_68_1177 (reverse)

seq1  TAATAG-TCGC-ATATGAC-AAGAAGGGTGAAAGATGA-GTGT-GTGTCC  45
      |||||| |||| ||||||| |||||||||||||||||| |||| ||  ||
seq2  TAATAGTTCGCAATATGACAAAGAAGGGTGAAAGATGAGGTGTGGTTCCC  50

seq1  AGCTCTGTCCAAAGTCTGAGTAACACACCAGTCCTTC--AGGAGTA-CAC  92
      |||||||||||||||||||||||||||||||||||||   |||||| |||
seq2  AGCTCTGTCCAAAGTCTGAGTAACACACCAGTCCTTCCAGGGAGTACCAC  100

seq1  TCAATTACAATGTCA-GAGGCATG-TGGTCATACAG-CAACAGATTGTTA  139
      |||| |||||||||| |||||||| ||||||||||| ||||||| |||||
seq2  TCAAATACAATGTCAGGAGGCATGTTGGTCATACAGCCAACAGA-TGTTA  149

seq1  AAAAACA----GAGAGCGATTCTTCTACTCCGTACCAATCAAATGATCCT  185
      ||||| |     |||||||||||||||||||||||||||| |||||||||
seq2  AAAAAAACAAGAAGAGCGATTCTTCTACTCCGTACCAATC-AATGATCCT  198

seq1  CAGCATGCCACCTAACC-TTGCTGAACCTTAGTCTTCCTCTTTT-AAAAA  233
      ||||||||||||||||| ||||||||| |||||||||||||||| |||||
seq2  CAGCATGCCACCTAACCTTTGCTGAACTTTAGTCTTCCTCTTTTAAAAAA  248

seq1  AAAATGTAAATAATACATGTACCAGAGTCATGGGGCTTTGGCAGGATCCA  283
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTAAATAATACATGTACCAGAGTCATGGGGCTTTGGCAGGATCCA  298

seq1  GGAGAAATAAATCTAAAAGTTTAGGCTGTGGATACTTACATGGGAAATAC  333
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAATAAATCTAAAAGTTTAGGCTGTGGATACTTACATGGGAAATAC  348

seq1  TTATCAGTCAGCACTAATAGCAATAACAGCTATTAGCTATTAACTAACAG  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAGTCAGCACTAATAGCAATAACAGCTATTAGCTATTAACTAACAG  398

seq1  CCGCAGTCTATCAAACACTCCTCAGTAGTTCAGTCTTCCTTCACGTCACA  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCAGTCTATCAAACACTCCTCAGTAGTTCAGTCTTCCTTCACGTCACA  448

seq1  GCCATCCCAACCCTCTGCACCTGTTCTTGTGCATGCACACAGCAGGGTGA  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCCCAACCCTCTGCACCTGTTCTTGTGCATGCACACAGCAGGGTGA  498

seq1  GAGAAAGAGCAGCAGCATGGACAGAGCAGAGCTGAGCCATAAATACCTGA  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGAGCAGCAGCATGGACAGAGCAGAGCTGAGCCATAAATACCTGA  548

seq1  AGGCAGGGCTCCCTTACCCTCTCCAGGAAGCGTGTAGGGCAGTGGCCCCA  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGGCTCCCTTACCCTCTCCAGGAAGCGTGTAGGGCAGTGGCCCCA  598

seq1  GCAAAGCAGCTTAGTAGCAAGCACCCCCAAGCCACCACAGTAATGTGATC  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGCAGCTTAGTAGCAAGCACCCCCAAGCCACCACAGTAATGTGATC  648

seq1  CAAGGGCCTTTTCATAGAGGACTGTATAAATAGCCCTCTGATTATAGAGG  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGCCTTTTCATAGAGGACTGTATAAATAGCCCTCTGATTATAGAGG  698

seq1  ACTCGGTGTCCAGCACTCCGGGTTAGGGCACTCCCTGATGGGCTTTCCTC  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGGTGTCCAGCACTCCGGGTTAGGGCACTCCCTGATGGGCTTTCCTC  748

seq1  AGGGTTGTGAGCAGTGGAGAGCTGTGGCTTGGAAGCAGCTGCACATGTCC  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTGTGAGCAGTGGAGAGCTGTGGCTTGGAAGCAGCTGCACATGTCC  798

seq1  TCCAGGAGCCTCCAAAGGGCTTGCTTTCTCTCTCTCTTCCCAACCCACAA  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGAGCCTCCAAAGGGCTTGCTTTCTCTCTCTCTTCCCAACCCACAA  848

seq1  TGTTATGTGGTTCTAGAGCCTCTAAAATTAAACCACTGCTAAGCCACCAC  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATGTGGTTCTAGAGCCTCTAAAATTAAACCACTGCTAAGCCACCAC  898

seq1  AACTCCTGCACCCGCCTTTGGCTCTGAAGACCGCAAGGTCCGGGAGAACC  933
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCTGCACCCGCCTTTGGCTCTGAAGACCGCAAGGTCCGGGAGAACC  948

seq1  GACTTGAGCCCAGTTAATTTGGAAGCACTGGTGTGTCAACTGTGGGCTGT  983
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGAGCCCAGTTAATTTGGAAGCACTGGTGTGTCAACTGTGGGCTGT  998

seq1  GTTGTGTTGTTTTGTTTTGGTTTGGTTTGGTTTTTTCCCCTTCCATATTC  1033
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGTTGTTTTGTTTTGGTTTGGTTTGGTTTTTTCCCCTTCCATATTC  1048

seq1  TTACCTAGTTTCCACCACTCACTGCTGGTACCTCTTTGAGTCACCAGGAT  1083
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTAGTTTCCACCACTCACTGCTGGTACCTCTTTGAGTCACCAGGAT  1098

seq1  TTACCAGAATTC  1095
      ||||||||||||
seq2  TTACCAGAATTC  1110


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