BAC Information

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BAC

Clone NameB6Ng01-348C02
Chromosome6 (Build37)
Map Location 10,738,028 - 10,739,119
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC330264, LOC100040285
Downstream geneLOC667650, AA545190
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-348C02.bB6Ng01-348C02.g
ACCGA129516GA129517
length1,2511,094
definitionB6Ng01-348C02.b B6Ng01-348C02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaataccttcagtgaaatcacagtgttttcagtttaacctttaaa
gaatttatttatttatttttatcctaaactctccccctcaggatcccccc
ataacagagtttccccgcactcccaccttctcattactctgaggattagg
ccaccttggccatcctctggcacatcaagtctcttcagaattatacacat
tctctcccactgatgcaggacaaaggtagccctctgctacatatgtgcca
gggccttgttgcagactctatatgctctttggttggtgaagaagtctcta
agagctcacagttgtccagattagttaacactgttggtctacttgtgggt
ttcctattctcttcagggccttcaatgcttcccccaactcttccatacct
ctgtccaatgtaaggctgtgggtatctacatgtgtttcagtcagttgcta
gaaagagactttaagaggacagttatgctagacataactgcatattattc
ataatatcagggattggtgcttgctcatgggatgggtttaaagttgggtt
ggttattggttagcctttccttcagtctctactccatttatgtccctgaa
tttcttttagtcagaacatattttgggtctaaaatttgtgggtgtgttag
tattcttatcacaacactgggggtactgcctggctacagtagtagtctat
ttagtttccatgttccctctgttgggcgtctgggcaaaggttacccacac
tgactcctgaagtctccatcatcccaggtctctgggacttcctagagaac
tgtccctccctgctccccataactgaagatagactcacctgggccttcat
ggtctctcttatgtctctttccacacctgatcatgtcccacgctcccaca
ttcgccttccatttcccacccaagtcctttggtccctctgctttccatga
ctattttgctctgcttataagtgggattcaaccatcctcacctcagatct
ttctcatcttgtttaacttctttggcttctatgtgtatatcataggtgtt
ctatatatttaatggcctcatatcacttgcaagtgagttataaactatgc
atgtcctactgtgtctgagtaactccacctccataatggaatgttttctc
cctccatctaccttatatggccaaatttctgaattcctcattattgcctg
aaatatttccaatgtgtaatggcaccatggctttctctgacacaccatct
c

gaattcagtaggaagctaagctgacactattcctactgtcacagacctga
ggctagagatactgaggaagaatagactagctgaaaagtggcacaaatgt
tcatggggaggggaaattaagcccaaaccacatataattataggattcaa
cataaaattaacacatcagtatataatttgatgctaaaacaaatcacatc
aaaattaacccctaattaaaatgtaattctaagcttttaatatggtttgg
ccaaattttgttctttcttcccaagggtgggtcatgctttgattagattg
gtcaatttctcacactaatgaagggtatatgtctgtctgtgcctaaatat
tgcaatatataatgtgtatgttctacagtagatagccagcaagagccaca
atgagtccatggggaagataagacatggaaagtctcagggtacaacactg
actacctgatatagaagcctgttcttccaaaggcacttttgacttcccac
agggtcctcaagctcatgagtcatatctgaatgtgtgactatctgaatat
aaacacacacagtattactcccttaaaacctcttcatgccagaagctgga
ctttgtgtgtccatggaaacaaaataatacaactgaatgttttcaagatt
ttcacaattaatgactgagccttttaacattctgagtcagtgcagagaat
gcacattttccccatggccatgagtgttcagaaattccagttttatttat
tagatacattttatatccatcatccctttatgagaaacacagtgaaaaag
tagttagacacagctccagcaaaaatgaagcatgaacgtgaccataagtc
cctgctcagagcagggccaacatagctaccagtgtcagtcagcacatgag
gacagggggccttacatatttatggacaccatgatcactaatactgctat
tttgggggcaggttggcagaagttgggtacaagtttaaggtaaatgcccc
cagaagcctccataactcacagcagggctctgctgtaacattaatcttat
tgtgattcatcaaactctatttattcattaattaatctttttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_10738028_10739119
seq2: B6Ng01-348C02.g_65_1158

seq1  GAATTCAGTAGGAAGCTAAGCTGACACTATTCCTACTGTCACAGACCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAGGAAGCTAAGCTGACACTATTCCTACTGTCACAGACCTGA  50

seq1  GGCTAGAGATACTGAGGAAGAATAGACTAGCTGAAAAGTGGCACAAATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGAGATACTGAGGAAGAATAGACTAGCTGAAAAGTGGCACAAATGT  100

seq1  TCATGGGGAGGGGAAATTAAGCCCAAACCACATATAATTATAGGATTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGGGAGGGGAAATTAAGCCCAAACCACATATAATTATAGGATTCAA  150

seq1  CATAAAATTAACACATCAGTATATAATTTGATGCTAAAACAAATCACATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAATTAACACATCAGTATATAATTTGATGCTAAAACAAATCACATC  200

seq1  AAAATTAACCCCTAATTAAAATGTAATTCTAAGCTTTTAATATGGTTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAACCCCTAATTAAAATGTAATTCTAAGCTTTTAATATGGTTTGG  250

seq1  CCAAATTTTGTTCTTTCTTCCCAAGGGTGGGTCATGCTTTGATTAGATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTTTGTTCTTTCTTCCCAAGGGTGGGTCATGCTTTGATTAGATTG  300

seq1  GTCAATTTCTCACACTAATGAAGGGTATATGTCTGTCTGTGCCTAAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATTTCTCACACTAATGAAGGGTATATGTCTGTCTGTGCCTAAATAT  350

seq1  TGCAATATATAATGTGTATGTTCTACAGTAGATAGCCAGCAAGAGCCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATATATAATGTGTATGTTCTACAGTAGATAGCCAGCAAGAGCCACA  400

seq1  ATGAGTCCATGGGGAAGATAAGACATGGAAAGTCTCAGGGTACAACACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTCCATGGGGAAGATAAGACATGGAAAGTCTCAGGGTACAACACTG  450

seq1  ACTACCTGATATAGAAGCCTGTTCTTCCAAAGGCACTTTTGACTTCCCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCTGATATAGAAGCCTGTTCTTCCAAAGGCACTTTTGACTTCCCAC  500

seq1  AGGGTCCTCAAGCTCATGAGTCATATCTGAATGTGTGACTATCTGAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCCTCAAGCTCATGAGTCATATCTGAATGTGTGACTATCTGAATAT  550

seq1  AAACACACACAGTATTACTCCCTTAAAACCTCTTCATGCCAGAAGCTGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACACACAGTATTACTCCCTTAAAACCTCTTCATGCCAGAAGCTGGA  600

seq1  CTTTGTGTGTCCATGGAAACAAAATAATACAACTGAATGTTTTCAAGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGTGTCCATGGAAACAAAATAATACAACTGAATGTTTTCAAGATT  650

seq1  TTCACAATTAATGACTGAGCCTTTTAACATTCTGAGTCAGTGCAGAGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAATTAATGACTGAGCCTTTTAACATTCTGAGTCAGTGCAGAGAAT  700

seq1  GCACATTTTCCCCATGGCCATGAGTGTTCAGAAATTCCAGTTTTATTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATTTTCCCCATGGCCATGAGTGTTCAGAAATTCCAGTTTTATTTAT  750

seq1  TAGATACATTTTATATCCATCATCCCTTTATGAGAAACACAGTGAAAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATACATTTTATATCCATCATCCCTTTATGAGAAACACAGTGAAAAAG  800

seq1  TAGTTAGACACAGCTCCAGCAAAAATGAAGCATGAACGTGACCATAAGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAGACACAGCTCCAGCAAAAATGAAGCATGAACGTGACCATAAGTC  850

seq1  CCTGCTCAGAGCAGGGCCAACATAGCTACCAGTGTCAGTCAGCACATGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTCAGAGCAGGGCCAACATAGCTACCAGTGTCAGTCAGCACATGAG  900

seq1  GACAGGGGGCCTTACATATTTATGGACACCATGATCACTAATACTGCTAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGGGGCCTTACATATTTATGGACACCATGATCACTAATACTGCTAT  950

seq1  TTTGGGGGCAGGTTGGCAGAAGTT-GGTACAAG-TTAAGGTAAATGCCCC  998
      |||||||||||||||||||||||| |||||||| ||||||||||||||||
seq2  TTTGGGGGCAGGTTGGCAGAAGTTGGGTACAAGTTTAAGGTAAATGCCCC  1000

seq1  CAGAAGCCTCCATAACTCACAAGCAGGGCTCTGCCTGTAACATT-ATC-T  1046
      |||||||||||||||||||| |||||||||||| |||||||||| ||| |
seq2  CAGAAGCCTCCATAACTCAC-AGCAGGGCTCTG-CTGTAACATTAATCTT  1048

seq1  ATTGTGATTCATCAAAACTCTATTTATTCATT-ATTTATCTTTTTGT  1092
      ||||||||||||| |||||||||||||||||| ||| ||||||||||
seq2  ATTGTGATTCATC-AAACTCTATTTATTCATTAATTAATCTTTTTGT  1094


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