BAC Information

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BAC

Clone NameB6Ng01-349I10
Chromosome6 (Build37)
Map Location 128,420,986 - 128,422,184
singlet/doubletsinglet
Overlap genenone
Upstream geneParp11, Efcab4b, Prmt8, Tspan11, Tspan9, LOC100043853, LOC667560, Tead4, LOC652986, Tulp3, 5930416I19Rik, Foxm1, Nrip2, Itfg2, Fkbp4
Downstream geneEG667598, Pzp, LOC384494, EG667610, BC048546, Klrb1a, EG545878, LOC677440, Clec2h, LOC100043863, LOC100043861, Klrb1c, LOC100043862, Klrb1d, LOC667706, Clec2i, Clec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1, Clec2d, Cd69, 4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-349I10.bB6Ng01-349I10.g
ACCGA130494GA130495
length1,198218
definitionB6Ng01-349I10.b B6Ng01-349I10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttctccaacttaacagcatatctgtgtacagggtggttggtg
atcatgagtggttggtgaccaatggccagggaagactgctaggaaactgt
tctttagaggtaacatttctttaaatctctgttttggctagtgatgagca
aatctatctactcttggtcgtttattggattccaggagaaatgttaatag
gccctaggagagtctaggaccacaaagtttgtttttgctgtcagcatctt
ttctctggttaaacaggagctggaaatacagacccatgggaattggtacc
cagtacctgccccctgatgatgtgaaaggaaaggaaaggaaaggaaagga
aaggaaaggaaaggaggaacatcaagaggaaagggtgatgagagctgagt
acttctttcccacttcttggtctcatgtgttttatgtctgtgaagtttgg
tcgttttaattaatgctaattaaataaaactcacctctggccaatctcac
ttgcttcttccatcagtgtggagttggagagtgtggtttagggcaatgct
ccctcactgggtagatttgaccataagcatgggacattagggatagagat
ccagcagaatttggcttgatagatctgagacatctgagccttaagaagac
ccacggtggctattgttctctcagttttgtggcttttctttctggcataa
aatacagagtattggtttctactcaaatctcagctagaggcaatattctt
tcaagataccctgtggccctttcctctaaaaatggaaacagtctcatctg
cctccctagggagcaactgtcttctaactctgtcctcacattgagaaaag
gtctggactgtccccgcatcctccaggcttaggatgtggtcagacaatga
atcctcttagtgactctgttctagtcagctcccttattcagctatgacat
acagacacacttctgccacagtgcacctgcacttcaggatcacagcctgg
aagagcttggattggaacattctctgggagatttctatggtctattattt
tttttcttctgagatcatgctctaatgaagactttcttagggttttactg
ctgtgaactttcacccaattaccaaaggcactttttctaagacaacattt
aattgggggcctggctacagctcaaggtttgagtcaattattccatca
ctaacagttggagttcaggtatctctgactcttttccctgctcatgggaa
tcttttcctcctactggactgtcttatccagccctggtaagagggtttgt
gccctcttattgcatcttgttatcctgtattcagttgatgtcactgggag
gcctgctcttttctgaagggaaacaaaggagcagtggatgggggagtgga
gaggaaggggaactggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_128420986_128422184
seq2: B6Ng01-349I10.b_44_1241

seq1  GAATTCTTTTCTCCAACTTAACAGCATATCTGTGTACAGGGTGGTTGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCTCCAACTTAACAGCATATCTGTGTACAGGGTGGTTGGTG  50

seq1  ATCATGAGTGGTTGGTGACCAATGGCCAGGGAAGACTGCTAGGAAACTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGAGTGGTTGGTGACCAATGGCCAGGGAAGACTGCTAGGAAACTGT  100

seq1  TCTTTAGAGGTAACATTTCTTTAAATCTCTGTTTTGGCTAGTGATGAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAGAGGTAACATTTCTTTAAATCTCTGTTTTGGCTAGTGATGAGCA  150

seq1  AATCTATCTACTCTTGGTCGTTTATTGGATTCCAGGAGAAATGTTAATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTATCTACTCTTGGTCGTTTATTGGATTCCAGGAGAAATGTTAATAG  200

seq1  GCCCTAGGAGAGTCTAGGACCACAAAGTTTGTTTTTGCTGTCAGCATCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTAGGAGAGTCTAGGACCACAAAGTTTGTTTTTGCTGTCAGCATCTT  250

seq1  TTCTCTGGTTAAACAGGAGCTGGAAATACAGACCCATGGGAATTGGTACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGGTTAAACAGGAGCTGGAAATACAGACCCATGGGAATTGGTACC  300

seq1  CAGTACCTGCCCCCTGATGATGTGAAAGGAAAGGAAAGGAAAGGAAAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACCTGCCCCCTGATGATGTGAAAGGAAAGGAAAGGAAAGGAAAGGA  350

seq1  AAGGAAAGGAAAGGAGGAACATCAAGAGGAAAGGGTGATGAGAGCTGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAGGAAAGGAGGAACATCAAGAGGAAAGGGTGATGAGAGCTGAGT  400

seq1  ACTTCTTTCCCACTTCTTGGTCTCATGTGTTTTATGTCTGTGAAGTTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTTCCCACTTCTTGGTCTCATGTGTTTTATGTCTGTGAAGTTTGG  450

seq1  TCGTTTTAATTAATGCTAATTAAATAAAACTCACCTCTGGCCAATCTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTTTAATTAATGCTAATTAAATAAAACTCACCTCTGGCCAATCTCAC  500

seq1  TTGCTTCTTCCATCAGTGTGGAGTTGGAGAGTGTGGTTTAGGGCAATGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTCTTCCATCAGTGTGGAGTTGGAGAGTGTGGTTTAGGGCAATGCT  550

seq1  CCCTCACTGGGTAGATTTGACCATAAGCATGGGACATTAGGGATAGAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCACTGGGTAGATTTGACCATAAGCATGGGACATTAGGGATAGAGAT  600

seq1  CCAGCAGAATTTGGCTTGATAGATCTGAGACATCTGAGCCTTAAGAAGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAGAATTTGGCTTGATAGATCTGAGACATCTGAGCCTTAAGAAGAC  650

seq1  CCACGGTGGCTATTGTTCTCTCAGTTTTGTGGCTTTTCTTTCTGGCATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGGTGGCTATTGTTCTCTCAGTTTTGTGGCTTTTCTTTCTGGCATAA  700

seq1  AATACAGAGTATTGGTTTCTACTCAAATCTCAGCTAGAGGCAATATTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAGAGTATTGGTTTCTACTCAAATCTCAGCTAGAGGCAATATTCTT  750

seq1  TCAAGATACCCTGTGGCCCTTTCCTCTAAAAATGGAAACAGTCTCATCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATACCCTGTGGCCCTTTCCTCTAAAAATGGAAACAGTCTCATCTG  800

seq1  CCTCCCTAGGGAGCAACTGTCTTCTAACTCTGTCCTCACATTGAGAAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTAGGGAGCAACTGTCTTCTAACTCTGTCCTCACATTGAGAAAAG  850

seq1  GTCTGGACTGTCCCCGCATCCTCCAGGCTTAGGATGTGGTCAGACAATGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGACTGTCCCCGCATCCTCCAGGCTTAGGATGTGGTCAGACAATGA  900

seq1  ATCCTCTTAGTGACTCTGTTCTAGTCAGCTCCCTTATTCAGCTATGACAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCTTAGTGACTCTGTTCTAGTCAGCTCCCTTATTCAGCTATGACAT  950

seq1  ACAGACACACTTCTGCCACAGTGCACCTGCACTTCAGGATCCACAGCCTG  1000
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ACAGACACACTTCTGCCACAGTGCACCTGCACTTCAGGAT-CACAGCCTG  999

seq1  GAAGGAGCTTGGATTGG-ACATTCTCTGGGAGATTTCTTATGGTCTTATT  1049
      ||| ||||||||||||| ||||||||||||||||||| ||||||| ||||
seq2  GAA-GAGCTTGGATTGGAACATTCTCTGGGAGATTTC-TATGGTC-TATT  1046

seq1  ATTTTTTTTTCTTCTGAAGATCATGCTCTAATGAAGACTTTCTTAGGGTT  1099
      | |||||||||||||| |||||||||||||||||||||||||||||||||
seq2  A-TTTTTTTTCTTCTG-AGATCATGCTCTAATGAAGACTTTCTTAGGGTT  1094

seq1  TTACTGCTGTGAACTTTCACC--ATTACC-AAGGCAACTTTTCTAAGGAC  1146
      |||||||||||||||||||||  |||||| ||||||  |||||||| |||
seq2  TTACTGCTGTGAACTTTCACCCAATTACCAAAGGCACTTTTTCTAA-GAC  1143

seq1  AACATTTAATTGGGG--CTGGCTTACAGGCTCAGAGGTTT-AGTCCATTA  1193
      |||||||||||||||  ||||| |||| ||||| |||||| |||| ||||
seq2  AACATTTAATTGGGGGCCTGGC-TACA-GCTCA-AGGTTTGAGTCAATTA  1190

seq1  T--CATCA  1199
      |  |||||
seq2  TTCCATCA  1198