Query= MSMg01no045_b02.b1 MSMg01no045_b02.b1 CHROMAT_FILE:
MSMg01no045_b02.b1 PHD_FILE: MSMg01no045_b02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:04:55 2005
(509 letters)
>mm_chr6_118734169_118735077
Length = 909
Score = 897 bits (464), Expect = 0.0
Identities = 490/499 (98%), Gaps = 1/499 (0%)
Strand = Plus / Minus
Query: 12 ggaattccctagtatanatattctac-caactagggccacacaacatttgctctcttgtg 70
||||||||||||| || ||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 846 ggaattccctagtgtagatattctacacaactaggaccacacaacatttgctctcttgtg 787
Query: 71 attggctccttagactttgagtgatttctcgttgtagcatatataagagcttcatccttt 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 attggctccttagactttgagtgatttctcgttgtagcatatataagagcttcatccttt 727
Query: 131 tttacatcaatattccaccacgcgcactttccatagtctagtgagtccttgctctgggga 190
||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 726 tttacataaatattccaccacgcgcactttccatagtctggtgagtccttgctctggggg 667
Query: 191 tagaagaaaagctgcatttcaggcactagtggggatcccatagagtctctgctgcccact 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 tagaagaaaagctgcatttcaggcactagtggggatcccatagagtctctgctgcccact 607
Query: 251 ttgctatccatgcttaggggtgactcttatggctctttatctattaatggacatagtaac 310
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ttgctatcaatgcttaggggtgactcttatggctctttatctattaatggacatagtaac 547
Query: 311 tcagggcttcattaagtcaatgcatggacagtaacggttgcactatagctcattatctgg 370
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 546 tcagggcttcattaagtcaatgcatggacagtaacagttgcactatagctcattatctgg 487
Query: 371 actagatgctcacccagatgggtccttctcttctgtccagagaacagtgggcatgtgagc 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 actagatgctcacccagatgggtccttctcttctgtccagagaacagtgggcatgtgagc 427
Query: 431 cttcatccttctggtttcatatattccacaagcccatcactgtcctgagaaagcagccat 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 cttcatccttctggtttcatatattccacaagcccatcactgtcctgagaaagcagccat 367
Query: 491 gcgacctgaggcagagcga 509
|||||||||||||||||||
Sbjct: 366 gcgacctgaggcagagcga 348
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 909
Length adjustment: 10
Effective length of query: 499
Effective length of database: 899
Effective search space: 448601
Effective search space used: 448601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no045_b02.g1 MSMg01no045_b02.g1 CHROMAT_FILE:
MSMg01no045_b02.g1 PHD_FILE: MSMg01no045_b02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:04:55 2005
(344 letters)
>mm_chr6_118707852_118708595
Length = 744
Score = 636 bits (329), Expect = 0.0
Identities = 338/341 (99%)
Strand = Plus / Plus
Query: 1 aggagggtgcggtttccaatgaaggagctatctcaccagcggggcatttctgagaaccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggagggtgcggtttccaatgaaggagctatctcaccagcggggcatttctgagaaccac 260
Query: 61 gtatcagagccaagggtgtagctctaaaggcacctctttagtagtgaacgaggggactgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtatcagagccaagggtgtagctctaaaggcacctctttagtagtgaacgaggggactgc 320
Query: 121 tgggtattgttcagttctaccagggtctgcatcatctgaatgttacgctcaaaagctcca 180
|| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 tgagtattgttcagttctaccaggggctgcatcatctgaatgttacgctcaaaagctcca 380
Query: 181 tagaaagggacttcttatttaacagcctggagtttcagtttggggaacacacaaataaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagaaagggacttcttatttaacagcctggagtttcagtttggggaacacacaaataaac 440
Query: 241 agagtgccttggagccactcagaaacgtagttaaaatggcaaactttgtcctgtacttat 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 agagtgccttggagccactcagaaacatagttaaaatggcaaactttgtcctgtacttat 500
Query: 301 catcaagaattaaactaaaagtacccagatatcattaggag 341
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catcaagaattaaactaaaagtacccagatatcattaggag 541
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
