CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCCTCTTTCTCGCCAGAGATTTGCAGTATGCATACCATCTCTTCTACTTT
AGGTAAATTAACATCTTTTTTATTAGACATTTTCTTCATTTACATTTCAA
ATGCTATCCCAAAAGCCCTCTATACCCTCCCCCCACCCTGCTCCCCAACC
CACCCACTCCCACTTCTTGGCCCGGGCATTCCCCTGTACTGGGGCATATA
AAGTTTGCAAGACCAAGGGCCTCTCTTAAATCCTCATTTTCAACTATAAT
GCATTAACAATGATGTATATACTTTAAGGCCATTTCAGAACTAGATAACA
TAAGGCATAGGGAATATTAAACATTGGTATTAAGTTCAGTAAAGTTACCT
GTAATGATTATCATGGCAATGTTACTATTAGGAAGAGGCAGATACAACAG
GGTTTAAGCCGTATGTCTAAGACTGCTTCAGATTTACCAAGTTTTCTGGT
TTTTCCCTTATAGCAAAATGAACAAAACCCAAGTAAAGGTGTTATCTTTC
TGCTCCAAAAAGCTGTGGCTCTTTAGATGCGGGAACTTGAATGATCTCTG
TTGGAGCATTTTTTTTTTTTTGGTTACTAACAGCCCCTGAGAGGTTGATA
ACTCCTCTGCAGTGAAGGGGAAACAAAGGCCACCA

CCCTGATAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCTGTGTCCCATTAGTTTGGGTATGTT
GTGCCTTCAATTTCATTGCATTCTAGAAAATCTTTCTTTCTGTATTTCTC
TCTAACCAAATTATCATTGAGTAGAGAATTGTTCAGTTTTCATGGGTATG
TGAGTTTTCTGCTGTTTTTGTTGTTATTGAAGTCCCGGCTTAGTCCTTGG
TGATCTGATAGGATGCAAAGGATTATTTCAATCTTCGTGCATTTGTTGAG
GTTTATTTTGTGTCTGTGTATATGATCAGTTTTGGAGAAGGTTCTGTGAG
GTGCTGAGAAGAAGGCTTGTTTTTTTAATTTGGGGTGAAATGTTCTGTAA
ATATCTGTTAAATCCATTTGGTCCATAACTTCTTTTAGTTTAAAGGTCTC
TGTTTAGTTTCTGTTTAAATGACCTGTCCATTGGTAAGAATGAAATACTG
AATTCTCCCACTATCATTGTGTGAGAGTCCATGTGTGTTTTGAGCTTTAG
TAAAATTTCTTTTACAAATATGGAAGCCTTTGGATTTGGGACATAGATGT
TTGGAATTAAGATGTCATCTTAGTGGATTTTTTCCTTTAAGGAATATGAA
AGTATTCCTCTGCACATCTCTTGATTACTTTTGGTGGAT

Query= MSMg01no045_e18.b1 MSMg01no045_e18.b1 CHROMAT_FILE:
MSMg01no045_e18.b1 PHD_FILE: MSMg01no045_e18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:13 2005
         (600 letters)



>mm_chr6_102461411_102462415
          Length = 1005

 Score = 1085 bits (561), Expect = 0.0
 Identities = 589/601 (98%), Gaps = 6/601 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcctctttctcgccagagatttgcagtatgcataccatctcttctactttaggtaa 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcctctttct-gccagagatttgcagtatgcataccatctcttctactttaggtaa 264

                                                                       
Query: 65  attaacatcttttttattagacattttcttcatttacatttcaaatgctatcccaaaagc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attaacatcttttttattagacattttcttcatttacatttcaaatgctatcccaaaagc 324

                                                                       
Query: 125 cctctataccctccccccaccctgctccccaacccacccactcccacttcttggcccggg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cctctataccctccccccaccctgctccccaacccacccactcccacttcttggcccggg 384

                                                                       
Query: 185 cattcccctgtactggggcatataaagtttgcaagaccaagggcctctcttaaatcctca 244
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 385 cattcccctgtactggggcatataaagtttgcaagaccaagggcctctcttaaatcctaa 444

                                                                       
Query: 245 ttttcaactataatgcattaacaatgatgtatatactttaaggccatttcagaactagat 304
           |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 445 ttttcaactataatgcattaacaatgatgtgtatacttgaaggccatttcagaactagat 504

                                                                       
Query: 305 aacataaggcatagggaatattaaacattggtattaagttcagtaaagttacctgtaatg 364
           ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 505 aacataaggcataggaaatattaaacattggtatcaagttcagtaaagttacctgtaatg 564

                                                                       
Query: 365 attatcatggcaatgttactattaggaagaggcagatacaacagggtttaagccgtatgt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 565 attatcatggcaatgttactattaggaagaggcagatacaacagggtttaagccgtaagt 624

                                                                       
Query: 425 ctaagactgcttcagatttaccaagttttctggtttttcccttatagcaaaatgaacaaa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctaagactgcttcagatttaccaagttttctggtttttcccttatagcaaaatgaacaaa 684

                                                                       
Query: 485 acccaagtaaaggtgttatctttctgctccaaaaagctgtggctctttagatgcgggaac 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 acccaagtaaaggtgttatctttctgctccaaaaagctgtggctctttagatgcgggaac 744

                                                                       
Query: 545 ttgaatgatctctgttggagcattttttttttttt-----ggttactaacagcccctgag 599
           |||||||||||||||||||||||||||||||||||     ||||||||||||||||||||
Sbjct: 745 ttgaatgatctctgttggagcattttttttttttttttttggttactaacagcccctgag 804

            
Query: 600 a 600
           |
Sbjct: 805 a 805


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 1005
Length adjustment: 10
Effective length of query: 590
Effective length of database: 995
Effective search space:   587050
Effective search space used:   587050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)