CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCACCCAAGGACTACCGAATGGCAGAGAAGCACCTGAAAAAATGTT
CAAAATCCTTAATCATCAGAGAAATGCAAATCAAAACAACCCTTAGATTC
CATCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCATGTGACAACAG
ATGCTGGGGAGGATGTGGAGAAAGAGGAACACTTCTCCATTGTTGGTGGG
ATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGTTTCCTCAGA
AAATTGGACATAGTACTACTGGAGGATCCCGCAGTACCTCTCCTGGGCAT
ATATCCAGAAGATGTCCCAATGGGTAAGAAGGACACATGCTCCACTATGT
TCATAGCAGCCTTACCCACAATAGCCAGAAGCTGGAAAGAACCCAGATGC
CCCTCAACAGAGGAATGGATACAAAAAATGTGGTACATTTACACAATAGA
GTACTACTCAGCTATTAAAAATATGAATTTTTGAATTTCCTAGGCAATTG
GTTGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACAATCACAAAGGA
ACTCATATGATATGTACTCACTGATAAGTGGATATTAGCCCAGAATGTTA
GTATAGGGAGATATAAGGTACTATTTTGTC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXATTTGTTGTAGATGCTGCTCTCAGG
ATCCCAGATTGAACATTTGAATAATGTATAAGTACTTCTGTTGGTTTGAA
TATGGGTTTTACAATGTCCACTTATGCTGTTGGAATGAACAGTGTTAATA
CCACAAGGAAAAGACATTTTGTATTTATTCATTTTGTTTAGATGAACTAT
CACTTTATCAATAATTGATTTTATAAAATGGAAAATATTATCAAGGGATC
AAGAAGAGGCTTGGAGAATGCATTCATTATACTGGCAGCCAGCCACCATT
GGCAGTGTGTTACTCAAAGCTGCCAACCTGCTTCTCATTGGAGGTGGTTG
CTAGGAACCGTGTTATCACCAGTGCAAGCCTGAGTCCAGTTAGAAAATCT
GTTCAATTAAATTACTGATATTTTATTACATAAACATGATAAGCAATAAT
TTACTGCTTAGAAGACATTATTTGATTTGTGTATACCTCTACCTTTCATA
TGAGATGAAATCATATTAAGTGTCTCACATATACGCACTAGCACAGACCC
CCATACACATATCTCTCTCTGCCTCTCTGTCTCTGTTTCTCTGTCTCTCT
CTATCTCTCTCTCTGTCTCTTTCTTTCTCA

Query= MSMg01no045_l20.g1 MSMg01no045_l20.g1 CHROMAT_FILE:
MSMg01no045_l20.g1 PHD_FILE: MSMg01no045_l20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:46 2005
         (575 letters)



>mm_chr6_19819399_19820373
          Length = 975

 Score = 1081 bits (559), Expect = 0.0
 Identities = 571/575 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atttgttgtagatgctgctctcaggatcccagattgaacatttgaataatgtataagtac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttgttgtagatgctgctctcaggatcccagattgaacatttgaataatgtataagtac 260

                                                                       
Query: 61  ttctgttggtttgaatatgggttttacaatgtccacttatgctgttggaatgaacagtgt 120
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 ttctgttggtttgaatatgggttttataatgtccacttatgctgttggaatgaacagtgt 320

                                                                       
Query: 121 taataccacaaggaaaagacattttgtatttattcattttgtttagatgaactatcactt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taataccacaaggaaaagacattttgtatttattcattttgtttagatgaactatcactt 380

                                                                       
Query: 181 tatcaataattgattttataaaatggaaaatattatcaagggatcaagaagaggcttgga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatcaataattgattttataaaatggaaaatattatcaagggatcaagaagaggcttgga 440

                                                                       
Query: 241 gaatgcattcattatactggcagccagccaccattggcagtgtgttactcaaagctgcca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaatgcattcattatactggcagccagccaccattggcagtgtgttactcaaagctgcca 500

                                                                       
Query: 301 acctgcttctcattggaggtggttgctaggaaccgtgttatcaccagtgcaagcctgagt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acctgcttctcattggaggtggttgctaggaaccgtgttatcaccagtgcaagcctgagt 560

                                                                       
Query: 361 ccagttagaaaatctgttcaattaaattactgatattttattacataaacatgataagca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccagttagaaaatctgttcaattaaattactgatattttattacataaacatgataagca 620

                                                                       
Query: 421 ataatttactgcttagaagacattatttgatttgtgtatacctctacctttcatatgaga 480
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ataattcactgcttagaagacattatttgatttgtgtatacctctacctttcatatgaga 680

                                                                       
Query: 481 tgaaatcatattaagtgtctcacatatacgcactagcacagacccccatacacatatctc 540
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 681 tgaaatcatattaagtgtctcacatatacgcactagcacagacccccaaacacatatctc 740

                                              
Query: 541 tctctgcctctctgtctctgtttctctgtctctct 575
           |||||| ||||||||||||||||||||||||||||
Sbjct: 741 tctctgtctctctgtctctgtttctctgtctctct 775


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space:   545225
Effective search space used:   545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)