MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-047C13
Chromosome	6 (Build37)
Map Location	34,245,679 - 34,246,141
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Exoc4, Lrguk, Slc35b4
Downstream gene	Akr1b3, Akr1b8, LOC664942, 2310005E10Rik, Akr1b7, Bpgm, LOC100039184, Cald1, Agbl3, Tmem140, 3110062M04Rik, 9530020G05Rik, Stra8, 2010107G12Rik, Cnot4, Nup205, 1810058I24Rik, Slc13a4
Link	Open Mouse BAC browser

Click to get alignment info.

name	Exoc4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20336 MGI:1096376
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lrguk (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74354 MGI:1921604
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs, 2 Proteins

name	Slc35b4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58246 MGI:1931249
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Akr1b3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11677 MGI:1353494
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Akr1b8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14187 MGI:107673
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC664942 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664942
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	2310005E10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67861 MGI:1915111
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Akr1b7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11997 MGI:101918
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bpgm (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12183 MGI:1098242
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039184 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039184
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Cald1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109624 MGI:88250
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Agbl3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76223 MGI:1923473
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem140 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68487 MGI:1915737
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	3110062M04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78412 MGI:1925662
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9530020G05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:101240 MGI:2141558
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Stra8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20899 MGI:107917
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2010107G12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243753 MGI:1917272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cnot4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53621 MGI:1859026
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nup205 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70699 MGI:2141625
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 228 ESTs, 7 Proteins

name	1810058I24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67705 MGI:1914955
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 103 ESTs

name	Slc13a4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243755 MGI:2442367
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Exoc4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130512 GeneID:20336 MGI:1096376
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : exocyst complex component 4 transcript_id : NM_009148.3

name	Lrguk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94377253 GeneID:74354 MGI:1921604
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs, 2 Proteins product : leucine-rich repeats and guanylate kinase domain containing, transcript variant 1 transcript_id : XM_133060.5

name	Slc35b4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801101 GeneID:58246 MGI:1931249
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 35, member B4 transcript_id : NM_021435.2

name	Akr1b3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981908 GeneID:11677 MGI:1353494
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aldo-keto reductase family 1, member B3 (aldose reductase) transcript_id : NM_009658.2

name	Akr1b8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679790 GeneID:14187 MGI:107673
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aldo-keto reductase family 1, member B8 transcript_id : NM_008012.1

name	2310005E10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71067101 GeneID:67861 MGI:1915111
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310005E10 gene transcript_id : NM_172398.3

name	Akr1b7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753147 GeneID:11997 MGI:101918
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aldo-keto reductase family 1, member B7 transcript_id : NM_009731.1

name	Bpgm (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387549 GeneID:12183 MGI:1098242
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 2,3-bisphosphoglycerate mutase transcript_id : NM_007563.3

name	LOC100039184 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255038 GeneID:100039184
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039184 transcript_id : XM_001472413.1

name	Cald1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130169 GeneID:109624 MGI:88250
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : caldesmon 1 transcript_id : NM_145575.2

name	Agbl3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120300908 GeneID:76223 MGI:1923473
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP/GTP binding protein-like 3 transcript_id : NM_178630.3

name	Tmem140 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802935 GeneID:68487 MGI:1915737
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 140 transcript_id : NM_197986.2

name	3110062M04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46559435 GeneID:78412 MGI:1925662
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3110062M04 gene transcript_id : NM_199145.1

name	9530020G05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61656181 GeneID:101240 MGI:2141558
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9530020G05 gene transcript_id : NM_001013366.1

name	Stra8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678172 GeneID:20899 MGI:107917
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : stimulated by retinoic acid gene 8 transcript_id : NM_009292.1

name	2010107G12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85701583 GeneID:243753 MGI:1917272
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2010107G12 gene transcript_id : NM_001025573.1

name	Cnot4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381083 GeneID:53621 MGI:1859026
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CCR4-NOT transcription complex, subunit 4 transcript_id : NM_016877.3

name	Nup205 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94377254 GeneID:70699 MGI:2141625
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 209 ESTs, 4 Proteins product : nucleoporin 205, transcript variant 1 transcript_id : XM_133073.7

name	Slc13a4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354060 GeneID:243755 MGI:2442367
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 13 (sodium/sulfate symporters), member 4 transcript_id : NM_172892.2

name	Exoc4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83921574 CCDS:CCDS19987.1 GeneID:20336 MGI:1096376
definition	GO_component : GO:0000145 - exocyst [Evidence IEA] GO_function : GO:0030165 - PDZ domain binding [Evidence IPI] GO_process : GO:0006887 - exocytosis [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0006904 - vesicle docking during exocytosis [Evidence IEA] codon_start : 1 note : SEC8-like 1 product : SEC8 protein_id : NP_033174.2

name	Lrguk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20916032 GeneID:74354 MGI:1921604
definition	codon_start : 1 product : leucine-rich repeats and guanylate kinase domain containing isoform 1 protein_id : XP_133060.1

name	Slc35b4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946804 CCDS:CCDS19989.1 GeneID:58246 MGI:1931249
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005351 - sugar porter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : solute carrier family 35, member B4 protein_id : NP_067410.1

name	Akr1b3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981909 CCDS:CCDS19990.1 GeneID:11677 MGI:1353494
definition	GO_function : GO:0004032 - aldehyde reductase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation note : aldehyde reductase 1; aldo-keto reductase family 1, member B1 (aldose reductase) product : aldo-keto reductase family 1, member B3 (aldose reductase) protein_id : NP_033788.2

name	Akr1b8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679791 CCDS:CCDS19991.1 GeneID:14187 MGI:107673
definition	GO_function : GO:0004032 - aldehyde reductase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] codon_start : 1 note : fibroblast growth factor regulated protein product : aldo-keto reductase family 1, member B8 protein_id : NP_032038.1

name	2310005E10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71067102 CCDS:CCDS19992.1 GeneID:67861 MGI:1915111
definition	GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA] codon_start : 1 product : aldo-keto reductase family 1, member B10 protein_id : NP_765986.3

name	Akr1b7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753148 CCDS:CCDS19993.1 GeneID:11997 MGI:101918
definition	GO_function : GO:0004032 - aldehyde reductase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0044255 - cellular lipid metabolism [Evidence TAS] codon_start : 1 exception : mismatches in translation note : androgen regulated vas deferens protein product : aldo-keto reductase family 1, member B7 protein_id : NP_033861.1

name	Bpgm (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680806 CCDS:CCDS19994.1 GeneID:12183 MGI:1098242
definition	GO_function : GO:0004082 - bisphosphoglycerate mutase activity [Evidence IEA]; GO:0004083 - bisphosphoglycerate phosphatase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016868 - intramolecular transferase activity, phosphotransferases [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0004619 - phosphoglycerate mutase activity [Evidence IEA] GO_process : GO:0006096 - glycolysis [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 product : 2,3-bisphosphoglycerate mutase protein_id : NP_031589.1

name	LOC100039184 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255039 GeneID:100039184
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472463.1

name	Cald1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704156 GeneID:109624 MGI:88250
definition	GO_component : GO:0030478 - actin cap [Evidence IDA]; GO:0005624 - membrane fraction [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence TAS]; GO:0005516 - calmodulin binding [Evidence IEA]; GO:0017022 - myosin binding [Evidence IEA] GO_process : GO:0006936 - muscle contraction [Evidence IEA]; GO:0006940 - regulation of smooth muscle contraction [Evidence TAS] codon_start : 1 product : caldesmon 1 protein_id : NP_663550.1

name	Agbl3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120300909 CCDS:CCDS19995.1 GeneID:76223 MGI:1923473
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0004182 - carboxypeptidase A activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : carboxypeptidase 3, cytosolic product : ATP/GTP binding protein-like 3 protein_id : NP_848745.2

name	Tmem140 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37574062 CCDS:CCDS19996.1 GeneID:68487 MGI:1915737
definition	codon_start : 1 product : hypothetical protein LOC68487 protein_id : NP_932103.1

name	3110062M04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46559436 CCDS:CCDS19997.1 GeneID:78412 MGI:1925662
definition	codon_start : 1 product : hypothetical protein LOC78412 protein_id : NP_954596.1

name	9530020G05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61656182 GeneID:101240 MGI:2141558
definition	codon_start : 1 product : hypothetical protein LOC101240 protein_id : NP_001013384.1

name	Stra8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678173 GeneID:20899 MGI:107917
definition	codon_start : 1 product : stimulated by retinoic acid gene 8 protein_id : NP_033318.1

name	2010107G12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701584 CCDS:CCDS19998.1 GeneID:243753 MGI:1917272
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC243753 protein_id : NP_001020744.1

name	Cnot4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560446 CCDS:CCDS19999.1 GeneID:53621 MGI:1859026
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 exception : mismatches in translation note : negative regulator of transcription 4 homolog product : CCR4-NOT transcription complex, subunit 4 protein_id : NP_058573.2

name	Nup205 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51711896 GeneID:70699 MGI:2141625
definition	codon_start : 1 product : nucleoporin 205 isoform 1 protein_id : XP_133073.3

name	Slc13a4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370364 CCDS:CCDS20000.1 GeneID:243755 MGI:2442367
definition	codon_start : 1 product : solute carrier family 13 (sodium/sulfate symporters), member 4 protein_id : NP_766480.1

name	LOC664942 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664942
definition	number : 2 pseudo : _no_value

name	LOC664942 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664942
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:64416
definition	standard_name : WI-14795

name	(CDS detail)
type	STS
link
xref	UniSTS:130749
definition	standard_name : D6Mit206

name	(CDS detail)
type	STS
link
xref	UniSTS:116602
definition	standard_name : D6Mit270

name	(CDS detail)
type	STS
link
xref	UniSTS:130860
definition	standard_name : D6Mit309

name	(CDS detail)
type	STS
link
xref	UniSTS:163162
definition	standard_name : RH126454

name	(CDS detail)
type	STS
link
xref	UniSTS:179360
definition	standard_name : AW494345

name	(CDS detail)
type	STS
link
xref	UniSTS:235405
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:130862
definition	standard_name : D6Mit310

name	(CDS detail)
type	STS
link
xref	UniSTS:227800
definition	standard_name : D4Rat257

name	(CDS detail)
type	STS
link
xref	UniSTS:122682
definition	standard_name : 01.MMHAP96FRA7.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130817
definition	standard_name : D6Mit269

name	(CDS detail)
type	STS
link
xref	UniSTS:235404
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:125643
definition	standard_name : U04204

name	(CDS detail)
type	STS
link
xref	UniSTS:130994
definition	standard_name : D6Mit92.1

name	(CDS detail)
type	STS
link
xref	UniSTS:130995
definition	standard_name : D6Mit92.4

name	(CDS detail)
type	STS
link
xref	UniSTS:235403
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:265050
definition	standard_name : Bpgm

name	(CDS detail)
type	STS
link
xref	UniSTS:207936
definition	standard_name : BB284089

name	(CDS detail)
type	STS
link
xref	UniSTS:220464
definition	standard_name : RH138377

name	(CDS detail)
type	STS
link
xref	UniSTS:162172
definition	standard_name : RH125350

name	(CDS detail)
type	STS
link
xref	UniSTS:207937
definition	standard_name : RH127279

name	(CDS detail)
type	STS
link
xref	UniSTS:179358
definition	standard_name : AI323730

name	(CDS detail)
type	STS
link
xref	UniSTS:124590
definition	standard_name : 45.MMHAP75FRG12.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:125924
definition	standard_name : Z31359

name	(CDS detail)
type	STS
link
xref	UniSTS:116603
definition	standard_name : D6Mit268

name	(CDS detail)
type	STS
link
xref	UniSTS:247701
definition	standard_name : AI763841

name	(CDS detail)
type	STS
link
xref	UniSTS:235406
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:179359
definition	standard_name : AW536160

name	(CDS detail)
type	STS
link
xref	UniSTS:164320
definition	standard_name : AV071549

name	(CDS detail)
type	STS
link
xref	UniSTS:212438
definition	standard_name : RH129130

name	(CDS detail)
type	STS
link
xref	UniSTS:124211
definition	standard_name : 37.MHAa63d1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:162229
definition	standard_name : RH125407

name	(CDS detail)
type	STS
link
xref	UniSTS:210237
definition	standard_name : RH136243

name	(CDS detail)
type	STS
link
xref	UniSTS:165459
definition	standard_name : AI987683

name	(CDS detail)
type	STS
link
xref	UniSTS:270869
definition	standard_name : PMC138456P1

name	(CDS detail)
type	STS
link
xref	UniSTS:225877
definition	standard_name : G65199

name	(CDS detail)
type	STS
link
xref	UniSTS:267560
definition	standard_name : MARC_13799-13800:1028296759:1

name	(CDS detail)
type	STS
link
xref	UniSTS:235409
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:235408
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:235410
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128563
definition	standard_name : D1Mit222

name	(CDS detail)
type	STS
link
xref	UniSTS:164321
definition	standard_name : AV248391

name	(CDS detail)
type	STS
link
xref	UniSTS:159492
definition	standard_name : AI414869

name	(CDS detail)
type	STS
link
xref	UniSTS:165458
definition	standard_name : AI848234

name	1810058I24Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94377264 GeneID:67705 MGI:1914955
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 103 ESTs product : RIKEN cDNA 1810058I24 gene transcript_id : XR_002347.1

clone name	MSMg01-056K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515L16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-132H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380H16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-142P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515C18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-408P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052G07
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-047C13.T7 (MSMg01no047_c13.b1)	MSMg01-047C13.TJ (MSMg01no047_c13.g1)
ACC	AG277343	AG277344
length	694	1,776
length of high quality (start - end)	466 (45 - 510)	---
definition	CHROMAT_FILE: MSMg01no047_c13.b1 PHD_FILE: MSMg01no047_c13.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 12:07:27 2005	CHROMAT_FILE: MSMg01no047_c13.g1 PHD_FILE: MSMg01no047_c13.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 12:07:27 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA ATTCTATGTTCACATCCATAGCTCATTTTTAATCACAAAAATGAGCGGTC TCTACATCTCGTTTGTCCTTACATCAGTCTAGTTGGGTTTATGTATCGGG AGTCTCACTTTACAGATTAACTGAAATCAGGGAAATCTTAGTAAGATGTC GAAGATCTCACAGCTTGTCAGCAATGCCACCTTCTAATTCTGTGGCCTTT CCGCTGACTTTCTTACTCTGTTCCTGCTTTCTTAACTCACGACATAGAAA CATTTAAGTGGCTGCCTATGATTAAGCTAAAGGAAGAAAGCAATTATCTT CTTAAACTGATTTTCTCTCCGGTTCTTCTTGGCTTGCTGACTCATGAGTG AGAAGCAAAATTTTCCATCAGGTAGAAGTCATCTCAGTGGTATGAGGATG TGAGAGGTGGTCAGAGATGAGGCAACAGATTTTGAACTATCACGGCGCAA TCTCACAGGCAGCTGATACTCAGGGAAGAAAAGGCCAGCCTTGGGGCCCT GCCCAGGAGTCAGATAAGTTCTGATGAACTTGGAGTACTAGTCAAAAGGA TTTATAGAATGAAACCTCCATGGTTTCTCATGGTAGAGGCCCTGGTATCA GCTTGGTTCGGCCCAGTGCCTTGTTTCTGTCCCTATTATGTCCG	TTTTTCCTCCTATATATTTTCACCTCTTTTTCCACCCTTCTTTATATAAA TCTACCTATATTCTCTTCCTTCTTATATCACTCCTCCCCATTAATTCAAA CACCCTCTTTTAACCACACGTATTATCCCTCCGTATTTCTACACCCTCTA CTTATTTATATTACTCACTCAATTAATATCTCTCTACACACGCTATTCCC CATTTGACCACCTAACATACAACTACAATTTATATNCCCCGCACATGAAC TAGCTCNCGACGTGTATCGCGTGCGACGCGGTCGGTGTGATAAGGTGGGG ATATACGCCCGAATATAATCGCTCCGCACATATACTTCATGCTAACAATC AGTTTAGATATTGCGCTGAGAATAATCGGCCGGACGTGTACAGCCGCAAA TCTAGCGGAGAGTATAATACGACGCAGAGATTTATATCGCGTCGCGTGGC GGCATTAGAGCGCACGAGGTTATGTGTGGGGCGCGACGCGGGTGGTATAT CGCGGCGGCAACCTGACCTTGCGGGTGAATTAATGTTGGTTATCTAATTA GGAGGCGCGCGGCGGAGCGATTCGCTACTAGAACGACCTAACATCGAAGT GTAACACATTAGCGGTATGAACAACACACTCANACTACCCATAGATAATA CCCAACCACGAGATTGTAAGATGCACGCAGCGGCGTGATGGTGACGGGTG ATATGGAGCAGCGGTCGTATTAGGTTCATTGTAATGACGAAGACTGCGTG TGGAGACGACGACATATCGAAAAGGTGTGAGCGGAGAGAAGCTGCGCGAG CGAGTAGGTACACATCGTATCGGATAACCGCGCAGTACGTAGTAGGCGTG TATGACGCTAATCTACCTTATCACACTACAAGTGTACACAANAGTCTATC ATAATTCCATTACATCTCGCCGCTATACGATNCGTGTCGCGCGCGCGCGT ATTATCATACGCGTCGCGCAGCAATGTGCGCGATGTGATGTATAGTGTGC GCGCACGTACTATCGTGTATGCGTCGTATGTGCGTGCTATCTGATCGTGG AGNTGCTACATGTGATGCGTCGACCGCGTATGTGTGGTGTGTCTCTCTCT CCTCGTGTGTCGCCGAGCGTATCTCCTGATGTGTGTTTATGTGTCGATTA TAATCTCAATGTCTGTCAGCGCTATATGATCGATGCGTCATCGACGATGC GCGGCGATGCGTCNTATAGACTATGTGTGGTGTGACGTGAGTATGTGTGT GCGTAATGTGCCGAGCTCCCTTGGTTGTGTCGGTGTGTGTGACGCATGNC TGTCGCGGGTGTACGTCGCCGCGNCGTGAGGCGACTGTGATGACGCCAGA CGAGATGACGACTAATATANCTGAGANAGAGGACCGACGCGTGACGCGAG CAGATGATGTGACGAAGGCGCATAGTATTNNGTCCTGGTCTAACGGCGAT CATGTATCTACACAANCTCGCTCATGATGTCACTCTCGGCCGCGCAGCCG CTTCGACGAATGNTCGTCAATATAGCCTNGACGCGACTCGCACTGCGATG ATCNGTGACGGCGTGCGCTGNCGAGTNGANCATCCTGCGACCGNCGCGCA TTCATGAGCAACTAGCGGNACNANCGANGACGCATCGTGCTGATGTTACG AGTCGATGATGATCGTGGAGCACTCGNTGACACATGATAAAGATANAAAG TCATCCACNATGCGTGATCTCGACGCATCATGACTACACAGTACTACNGC TAGTNGTAGTNAGGTGNTTNGCTNTN
quality values	Open. Hide. 8 8 8 8 10 10 15 30 39 37 33 32 30 27 28 37 23 23 22 24 28 28 48 48 31 28 24 24 24 35 39 53 53 53 53 57 57 57 57 42 42 34 34 34 42 43 68 68 47 47 47 47 68 68 68 68 68 68 43 48 27 27 11 11 14 19 32 32 50 42 44 28 28 37 42 48 51 68 68 68 68 57 57 57 57 57 57 57 21 19 9 9 9 9 21 27 68 68 57 57 57 57 50 51 51 51 50 50 59 59 57 59 57 68 57 68 68 68 68 57 57 57 52 52 57 52 54 57 57 59 59 59 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 57 57 57 57 57 62 62 62 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 57 57 57 59 59 68 68 68 68 68 68 59 59 57 57 57 59 59 68 68 59 59 59 59 59 57 57 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 68 68 68 68 68 68 68 59 59 57 57 57 59 59 59 59 57 57 57 57 57 59 59 59 59 59 59 59 59 59 68 68 68 68 68 68 59 59 57 57 57 59 59 59 59 59 50 50 54 59 59 59 54 54 54 59 59 59 59 57 57 54 54 57 57 54 54 44 59 59 59 59 59 57 57 59 59 43 46 46 47 47 48 57 57 54 57 59 59 59 59 57 57 57 48 48 48 48 48 57 48 43 43 43 43 43 43 43 43 43 48 48 57 57 57 43 36 32 18 18 14 14 14 18 24 28 39 43 59 34 25 20 23 23 28 24 18 18 20 28 30 30 37 37 39 28 28 28 31 24 31 31 22 22 11 11 11 17 17 24 25 11 10 10 18 19 21 24 25 25 28 34 34 30 24 26 20 22 30 32 31 23 23 20 24 20 30 26 20 17 24 17 19 19 24 24 20 12 12 19 19 12 14 16 20 12 11 11 15 18 15 11 9 9 11 14 17 17 16 18 15 19 15 14 14 15 17 14 9 9 10 10 10 8 9 11 10 19 21 11 10 10 10 10 11 11 12 11 11 10 12 10 10 10 10 10 10 18 13 14 14 14 13 10 10 10 10 10 9 9 9 8 10 7 6 8 8 11 12 12 12 12 13 21 19 10 8 8 8 8 8 9 8 8 8 8 8 8 8 8 7 6 6 8 8 9 10 10 11 12 12 12 10 8 8 8 8 8 8 10 10 11 6 6 8 8 10 13 8 9 9 9 11 9 11 11 10 15 10 10	Open. Hide. 12 12 12 12 6 6 6 6 6 8 8 8 6 6 6 6 7 15 8 10 12 15 15 8 10 9 9 10 10 11 7 10 6 6 6 7 10 8 8 8 8 10 8 8 8 8 8 8 8 8 8 6 6 6 6 6 6 6 6 8 8 8 8 8 6 8 6 6 6 7 10 9 9 9 9 9 8 12 8 8 8 8 8 8 8 9 9 9 7 7 9 6 6 6 6 6 6 6 6 6 6 6 6 8 6 7 8 10 10 11 8 8 8 8 9 9 6 6 6 6 6 6 6 6 6 6 8 8 6 6 7 6 10 8 8 8 13 8 8 6 8 6 8 8 8 8 10 8 8 6 6 6 6 8 8 10 8 8 8 8 8 8 11 11 11 11 10 9 9 6 8 6 6 8 8 8 8 11 11 8 8 8 6 6 6 6 8 8 10 10 9 10 10 10 15 12 14 12 12 8 8 8 8 10 6 7 6 6 6 6 6 6 6 6 6 8 10 8 8 8 8 10 8 6 6 8 8 8 8 10 8 10 11 10 3 0 3 8 8 10 10 9 10 8 8 8 6 6 8 8 8 8 8 6 8 3 0 3 10 10 10 10 8 8 8 8 9 10 10 10 11 11 8 8 6 6 8 8 6 6 6 6 8 8 9 8 8 8 8 10 10 10 6 6 6 6 8 6 8 8 8 8 8 9 8 8 8 6 6 7 6 8 8 6 9 7 7 12 9 12 10 10 10 8 8 8 8 8 8 8 8 6 6 6 6 8 8 8 8 10 10 10 8 8 8 8 8 8 6 6 6 6 8 8 8 8 8 8 10 8 10 9 9 9 10 10 8 6 6 8 8 8 10 8 8 8 6 6 6 6 6 6 8 6 8 8 10 9 8 8 8 8 6 6 7 6 6 6 6 6 6 6 6 6 8 8 10 9 8 8 8 8 8 9 9 9 9 9 8 8 8 8 8 8 8 8 9 10 10 8 10 8 8 8 8 8 8 8 10 10 10 9 8 8 8 8 8 8 10 6 6 6 6 6 6 8 8 8 8 8 12 9 10 10 10 10 10 9 9 8 8 6 6 6 6 8 8 10 10 10 8 10 10 15 9 8 8 8 6 6 10 6 8 8 8 8 8 8 8 8 8 8 10 6 6 6 10 6 6 6 8 10 8 8 8 8 8 6 6 8 8 6 6 8 8 8 8 8 8 7 7 6 6 6 8 8 6 6 8 6 9 9 6 6 6 6 6 6 10 9 8 8 8 8 8 9 9 10 12 10 8 8 7 6 6 6 7 8 8 8 10 8 8 6 6 6 6 6 6 6 6 6 6 8 8 10 8 7 9 7 8 8 8 8 8 6 6 8 8 15 9 8 6 6 6 8 7 7 8 8 12 7 9 8 8 13 12 10 7 7 8 6 8 9 9 10 8 8 8 8 9 3 0 3 6 8 7 7 8 7 8 8 8 6 6 8 6 6 8 6 6 6 6 6 6 6 8 10 8 8 9 10 10 12 10 11 9 8 8 8 11 11 13 11 12 11 13 13 10 8 8 8 8 8 8 8 6 6 6 6 8 6 6 8 6 6 8 6 8 8 9 9 10 8 8 7 6 8 6 8 8 8 8 8 8 8 10 7 6 6 6 6 6 8 10 9 8 8 8 6 6 9 7 12 8 7 6 8 6 9 9 10 9 9 8 7 7 7 8 7 8 8 8 8 8 8 8 8 8 8 10 8 10 9 10 8 6 6 6 8 8 8 10 10 8 8 6 10 7 9 9 9 11 7 7 8 7 8 8 8 8 8 8 8 16 8 6 6 6 8 7 7 9 7 9 12 9 8 13 10 10 6 6 8 6 10 10 11 11 10 8 8 8 8 8 8 8 8 6 6 6 8 10 6 6 6 6 8 10 10 8 8 8 11 15 16 10 8 7 7 8 13 10 9 8 8 8 6 6 6 6 9 7 6 6 6 6 6 6 6 6 9 10 10 8 8 8 8 8 8 10 11 11 15 11 11 10 10 10 10 3 0 3 9 11 11 11 11 15 8 8 8 8 8 8 9 8 8 8 9 8 9 9 6 6 6 6 10 6 6 8 10 8 7 6 6 6 8 6 6 3 0 3 6 8 6 6 7 6 9 9 9 11 14 19 10 10 9 9 10 10 9 8 8 8 10 10 10 8 8 8 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9 10 9 10 11 11 11 10 10 10 11 8 8 8 10 10 10 8 8 8 8 8 6 6 6 6 8 8 11 12 12 10 14 10 9 9 9 10 8 10 8 9 11 10 8 8 6 6 6 8 6 7 8 13 14 11 11 10 8 8 6 6 6 6 8 8 8 8 8 6 6 6 3 0 3 8 6 6 6 6 8 11 6 7 7 6 6 8 8 6 6 6 6 6 6 6 6 8 8 9 12 9 7 6 6 6 6 6 6 6 6 6 6 10 6 8 8 8 8 8 8 10 8 8 12 8 8 8 8 8 8 6 6 8 8 8 8 8 8 11 11 10 10 9 8 6 6 6 6 11 10 13 11 11 11 12 8 8 8 8 8 8 8 8 6 6 6 6 8 8 8 8 8 8 8 6 8 6 6 6 6 6 6 6 6 6 6 6 6 6 6 8 6 8 8 8 7 6 8 8 8 8 9 9 9 6 6 6 6 6 6 9 9 7 8 8 12 10 10 9 10 8 8 8 8 8 8 8 8 8 12 11 12 3 0 3 8 8 8 8 8 8 8 8 8 8 10 8 7 8 6 6 6 6 6 6 7 6 8 6 6 8 6 8 8 8 8 8 8 8 8 8 6 6 6 6 6 6 7 6 8 8 8 8 10 10 9 8 8 8 6 6 6 6 6 6 8 8 8 6 6 8 6 8 8 10 11 10 11 8 8 8 8 8 6 6 8 8 3 0 3 10 6 6 6 6 6 6 8 7 8 8 7 6 7 8 8 8 6 6 6 6 6 3 0 3 12 11 11 14 14 9 10 6 6 8 8 6 6 6 6 6 6 8 8 7 6 6 8 9 10 10 9 8 8 6 6 6 6 6 6 8 8 8 8 8 8 6 7 3 0 3 6 6 8 8 3 0 3 6 6 6 6 6 6 6 6 6 7 10 15 8 8 8 8 10 10 10 6 6 6 6 6 8 8 8 8 8 8 7 9 9 10 11 11 8 7 6 6 8 8 8 8 8 6 8 8 8 8 3 0 0 3 8 6 6 6 6 6 8 10 10 9 9 9 8 8 8 8 6 6 8 8 8 8 9 9 9 10 8 8 8 8 8 9 3 0 3 7 7 8 9 6 6 6 6 6 6 8 6 6 6 6 6 10 6 8 6 6 6 6 7 6 6 6 6 6 6 8 8 10 6 6 6 6 8 6 8 8 8 7 8 3 0 3 6 6 8 6 6 7 8 8 8 10 8 7 7 3 0 3 6 6 6 8 6 6 6 6 6 6 6 8 6 8 6 6 6 8 10 8 8 8 3 0 3 7 6 6 6 6 7 7 6 6 6 6 6 9 9 3 0 3 8 8 8 3 0 3 3 0 3 6 8 6 8 9 9 9 9 8 6 6 3 0 3 6 6 6 6 6 6 7 11 9 10 11 9 9 8 8 6 6 6 6 6 6 9 3 0 3 3 0 3 0 3 11 3 0 3 6 6 6 8 8 8 6 6 6 6 8 7 9 8 8 6 6 6 6 6 6 6 6 6 8 9 8 8 7 7 6 6 6 6 6 6 6 6 6 6 6 6 7 6 6 8 3 0 3 6 6 7 12 14 6 6 6 6 6 6 8 8 14 8 6 3 0 3 6 6 6 6 6 6 6 6 6 6 3 0 3 9 9 6 8 8 6 7 6 8 8 10 10 9 10 10 10 8 7 7 7 8 8 6 6 6 6 8 6 7 7 7 8 7 7 9 10 3 0 3 8 6 6 6 3 0 3 10 9 9 3 0 3 8 8 6 3 0 3 3 0 3 6 3 0 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no047_c13.b1 MSMg01no047_c13.b1 CHROMAT_FILE:
MSMg01no047_c13.b1 PHD_FILE: MSMg01no047_c13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:27 2005
         (466 letters)



>mm_chr6_34245302_34246169
          Length = 868

 Score =  853 bits (441), Expect = 0.0
 Identities = 457/463 (98%), Gaps = 2/463 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctatgttcacatccatagctcatttttaatcacaaaaatgagcggtctctacatc 64
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 840 gaattctatgttcacatccatagctcatttttaatcacaaaaattagcggtctctacatc 781

                                                                       
Query: 65  tcgtttgtccttacatcagtctagttgggtttatgtatcgggagtctcactttacagatt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 tcgtttgtccttacatcagtctagttgggtttatgtatcgggagtctcactttacagatt 721

                                                                       
Query: 125 aactgaaatcagggaaatcttagtaagatgtcgaagatctcacagcttgtcagcaatgcc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 aactgaaatcagggaaatcttagtaagatgtcgaagatctcacagcttgtcagcaatgcc 661

                                                                       
Query: 185 accttctaattctgtggcctttccgctgactttcttactctgttcctgctttcttaactc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 accttctaattctgtggcctttccgctgactttcttactctgttcctgctttcttaactc 601

                                                                       
Query: 245 acgacatagaaacatttaagtggctgcctatgattaagctaaaggaagaaagcaattatc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 acgacatagaaacatttaagtggctgcctatgattaagctaaaggaagaaagcaattatc 541

                                                                       
Query: 305 ttcttaaactgattttctctccggttcttcttggcttgctgactcatgagtgagaagcaa 364
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ttcttaaacggattttctctccggttcttcttggcttgctgactcatgagtgagaagcaa 481

                                                                       
Query: 365 aattttccatcaggtagaagtcatctcagtggtatgaggatgt--gagaggtggtcagag 422
           ||||| ||||||||||||| |||||||||||||||||||||||  |||||||||||||||
Sbjct: 480 aatttcccatcaggtagaaatcatctcagtggtatgaggatgtgagagaggtggtcagag 421

                                                      
Query: 423 atgaggcaacagattttgaactatcacggcgcaatctcacagg 465
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 atgaggcaacagattttgaactatcacggcgcaatctcacagg 378


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 868
Length adjustment: 10
Effective length of query: 456
Effective length of database: 858
Effective search space:   391248
Effective search space used:   391248
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information