CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCTGTTCAGAATGCCTGTAATTAAGAGCATTGATTTCAGTGTTCAT
CTGGTCACCAACATCAAGAAGAAGGCTATCTCCTCCAATGTTTACCATTC
AAAAATATGGTTCACCGGTCCCCGTGAAAAATGTTTCCTGGGTTATGAAA
CTGGCTAGAAAATGGGAAAAGGTTTTCTGTGCATCTCCTAGGGTCAAATA
GAGCATTTGCCAGGAGAAGTTTCAAATGAACTCTAAGGAGGCGAGGTCAG
GGGCTTCACATCAAGAAGAAACCTATCTATAACGTTGAGCTGTGCTGATA
AGTTTACAGCCATCCTGGGCAGCAAATTCTAAAAAAAGGGGAAAAAGCTT
CACTGACAGAGAGACTTTAAAGCACTGTTCTAGAGAAAGAAAGGCTCACG
ACCTCATCACAAGGGTGGAGATGATAAACACACTTAACCCCTTTTTATAT
TGAATGATCCCACCCCCTNNTNCAAGGGCCTTGCACCCCAGTAGTTGGAA
GGGAGGGGGTAGGATNNCNTTTTTTAGAGCAATGAAAAACTGATGCCCTG
TAATGAAAGCCATTGAAATTTTATTTGATAAGTACCCGGGCATTTGGTCA
AAAGTTTTTTTACACTATGCACAATACGCCTAACCTCAACACAAGTATCG
CAACCTTTTTTATAAACATACAATTCCACCGGCTTTTTTTN

ACGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXACTGGATGAACACAAGATTGTGGTTT
GCTGCAATGAAGACATGCGGCTCACCGCCAACGTTCTCAGAAACGTTAGG
AATTCGGTGAATTCGGTGATTTTGCTTTGGGGTTCCCCGTATTTAAACAG
ACAACTCGGCTGCTCAACTACAGGCCTCTGCAAACTCAGTGTCATCTGAG
CAAGCTTAAGGGACAGCAAAATTTGATAGTAGCTGTTTAAGAGCAAGCCA
CAGATGGGGAAGCACCCTGGGCTGCTGAGATGACTCAGTAGGCAAAAGTG
CTTTCCTACTTGCATTGTGAGTCTGATAACCTGAGTTCAATTCGGTGGTT
GGTGGTAGAAGGATAAACCGGCTCCAGAGAGCTGTCCTGTGACCTCCACA
TGCTTACTTGGAACTCATGCATGCTCCCCTCTCCAAAATACACACTAATT
TTTCTTTCTTTCTTTTTTAAATGTGAAGAGCCCTCATATGCCATGGCAAT
CACAGAGACACAGCCGAATCTGCTCTCTGAAAAACACAAACAAGCTAGGA
GGCCTCTTCATCACACAGTGCATTAGGAAACAGCTGTTCAGCTTCAGATT
CTAATACGAATTCTTGGGACGGATCTTGTTCTATTTGCACTTGTAAATGT
TGTTTGGGCAGAAA

Query= MSMg01no047_l12.g1 MSMg01no047_l12.g1 CHROMAT_FILE:
MSMg01no047_l12.g1 PHD_FILE: MSMg01no047_l12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:08:07 2005
         (628 letters)



>mm_chr6_4330410_4331437
          Length = 1028

 Score =  959 bits (496), Expect = 0.0
 Identities = 553/578 (95%), Gaps = 11/578 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   actggatgaacacaagattgtggtttgctgcaatgaagacatgcggctcaccgccaacgt 60
           ||||||||||||||||||| |||||||||| |||||||| |||| ||||| || ||| ||
Sbjct: 567 actggatgaacacaagattctggtttgctgaaatgaagaaatgcagctcatcgtcaatgt 508

                                                                       
Query: 61  tctcagaaacgttaggaattcggtgaattcggtgattttgctttggggttccccgtattt 120
           ||||||||| ||| |||    ||||||||||||| |||||||||||||||||||||||||
Sbjct: 507 tctcagaaatgtttgga---gggtgaattcggtgcttttgctttggggttccccgtattt 451

                                                                       
Query: 121 aaacagacaactcggctgctcaactacaggcctctgcaaactcagtgtcatctgagcaag 180
           || |||||||        ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 aagcagacaa--------ctcaactacaggcctctgcaaactcagtgtcatctgagcaag 399

                                                                       
Query: 181 cttaagggacagcaaaatttgatagtagctgtttaagagcaagccacagatggggaagca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 398 cttaagggacagcaaaatttgatagtagctgtttaagagcaagccacagatggggtagca 339

                                                                       
Query: 241 ccctgggctgctgagatgactcagtaggcaaaagtgctttcctacttgcattgtgagtct 300
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 acctgggctgctgagatgactcagtaggcaaaagtgctttcctacttgcattgtgagtct 279

                                                                       
Query: 301 gataacctgagttcaattcggtggttggtggtagaaggataaaccggctccagagagctg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gataacctgagttcaattcggtggttggtggtagaaggataaaccggctccagagagctg 219

                                                                       
Query: 361 tcctgtgacctccacatgcttacttggaactcatgcatgctcccctctccaaaatacaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 tcctgtgacctccacatgcttacttggaactcatgcatgctcccctctccaaaatacaca 159

                                                                       
Query: 421 ctaatttttctttctttcttttttaaatgtgaagagccctcatatgccatggcaatcaca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 ctaatttttctttctttcttttttaaatgtgaagagccctcatatgccatggcaatcaca 99

                                                                       
Query: 481 gagacacagccgaatctgctctctgaaaaacacaaacaagctaggaggcctcttcatcac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98  gagacacagccgaatctgctctctgaaaaacacaaacaagctaggaggcctcttcatcac 39

                                                 
Query: 541 acagtgcattaggaaacagctgttcagcttcagattct 578
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 38  acagtgcattaggaaacagctgttcagcttcagattct 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space:   629124
Effective search space used:   629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)