Query= MSMg01no053_b01.b1 MSMg01no053_b01.b1 CHROMAT_FILE:
MSMg01no053_b01.b1 PHD_FILE: MSMg01no053_b01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:52 2005
(362 letters)
>mm_chr6_124130600_124131361
Length = 762
Score = 553 bits (286), Expect = e-162
Identities = 325/338 (96%), Gaps = 2/338 (0%)
Strand = Plus / Minus
Query: 5 gaattcagattctatcaccttaagttttt-tggatacactttcctcactatatttcagta 63
||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||
Sbjct: 337 gaattcagattctatcaccttaagtttttct-gatccactttcctcactatatttcagta 279
Query: 64 tagagcccatagtccttagcgaccacctagggcaagaacagttaacatccccacacaacc 123
||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tagagcccacagtccttagagaccacctagggcaagaacagttaacatccccacacaacc 219
Query: 124 atagattaagaacccctgccacggaccaggcccaataggcctctctcaatccgtgtggaa 183
||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 218 gtagattaagaaccactgccacggactaggcccaattggcctctctcaatccgtgtggaa 159
Query: 184 tcagggtttcagacagatgggcaaagagtgggcaagaattgacaaacagatgcagacaca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 tcagggtttcagacagatgggcaaagagtgggcaagaattgacaaacagatgcagacaca 99
Query: 244 agggagtgctgaatctgaatgtattttttccaagcaaataccagacttttaatacagaag 303
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 98 agggagtgctgaatctgaatgtattttttccaagcaaacaccagacttttaatacagaag 39
Query: 304 aaaaacaagaaaaccaggtggatacatttgtcaagtta 341
|||||||||||||||||||||||| || |||||||||
Sbjct: 38 aaaaacaagaaaaccaggtggatatatcagtcaagtta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 362
Length of database: 762
Length adjustment: 9
Effective length of query: 353
Effective length of database: 753
Effective search space: 265809
Effective search space used: 265809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no053_b01.g1 MSMg01no053_b01.g1 CHROMAT_FILE:
MSMg01no053_b01.g1 PHD_FILE: MSMg01no053_b01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:52 2005
(248 letters)
>mm_chr12_113320953_113321600
Length = 648
Score = 464 bits (240), Expect = e-135
Identities = 246/248 (99%)
Strand = Plus / Plus
Query: 1 agggtagccagagctacacagagaaaccctgtctaaaagagacagagaacgagagactga 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 agggtagccagagctacacagagaaaccctgtctaaaagagacagagaaagagagactga 260
Query: 61 tagagagagacagagagacagaaagagaactgctacattaccaatgtctacagaaattaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagagagagacagagagacagaaagagaactgctacattaccaatgtctacagaaattaa 320
Query: 121 atagcaaaatcactgtataataagttaagaaataatgaggataaacctaacaataataaa 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atagcaaaatcactgtagaataagttaagaaataatgaggataaacctaacaataataaa 380
Query: 181 agaatgggatttttaaaaagggtccagaggaaggcatgagaaatggctcagcggttagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agaatgggatttttaaaaagggtccagaggaaggcatgagaaatggctcagcggttagaa 440
Query: 241 gtacttac 248
||||||||
Sbjct: 441 gtacttac 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
