Query= MSMg01no054_f15.b1 MSMg01no054_f15.b1 CHROMAT_FILE:
MSMg01no054_f15.b1 PHD_FILE: MSMg01no054_f15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:31 2005
(546 letters)
>mm_chr6_98495475_98496420
Length = 946
Score = 779 bits (403), Expect = 0.0
Identities = 424/431 (98%), Gaps = 1/431 (0%)
Strand = Plus / Minus
Query: 1 tctaaaagccccacggtggtgttgtgcgtgggctgttgagttactgacctccctccccct 60
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 430 tctaaaagccccacggtggtgttgtgcgtgggctgttgagttactgaattccctccccct 371
Query: 61 tgctttagcccacgttcccatcttggaaatatacctcttcttaataaatcctctctgttc 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 370 tgctttagcccacgttcccatcttggaaatatacctcttcttaataaatcttctctgttc 311
Query: 121 tctggttattgcgcctgctccacttgttccagaacataagaacttggaatccttttaaga 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tctggttattgcacctgctccacttgttccagaacataagaacttggaatccttttaaga 251
Query: 181 gggaaccccaaaagtcccaaagaacagctaaacttgtcttaaacccattattttttttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gggaaccccaaaagtcccaaagaacagctaaacttgtcttaaacccattattttttttaa 191
Query: 241 atattttttattattacgtattttcctcaattacatttagaatgctatcccaaaaatccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 atattttttattattacgtattttcctcaattacatttagaatgctatcccaaaaatccc 131
Query: 301 ccataccctccccccccacttccctacccacccattcccattttttggccctggcattcc 360
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ccataccct-cccccccacttccctacccacccattcccattttttggccctggcattcc 72
Query: 361 cctgtactagggcatataaagtttgcatgtccaatgggcctctctttccagtgatggccg 420
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct: 71 cctgtactagggcatataaagtttgcgtgtccaatgggcctctctttccagtgatggctg 12
Query: 421 actaggccatc 431
|||||||||||
Sbjct: 11 actaggccatc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 946
Length adjustment: 10
Effective length of query: 536
Effective length of database: 936
Effective search space: 501696
Effective search space used: 501696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no054_f15.g1 MSMg01no054_f15.g1 CHROMAT_FILE:
MSMg01no054_f15.g1 PHD_FILE: MSMg01no054_f15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:31 2005
(527 letters)
>mm_chr6_98382675_98383601
Length = 927
Score = 973 bits (503), Expect = 0.0
Identities = 521/527 (98%), Gaps = 1/527 (0%)
Strand = Plus / Plus
Query: 1 attttgtagacaaaatgtagactgggactggggactcatctgtcatcatcgtgtcttctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attttgtagacaaaatgtagactgggactggggactcatctgtcatcatcgtgtcttctg 260
Query: 61 tcaaaagcatgttgcccttggcaatgggtctgctgttgctaatttcgtttgtttagaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaaaagcatgttgcccttggcaatgggtctgctgttgctaatttcgtttgtttagaagc 320
Query: 121 ttgctttttcctccttggttctccgagttgctgtgaattaaaaaaaaaaaattaaaactc 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 ttgctttttcctccttggttctccgagttgctgtgaattaaaaaaaaaaa-ttaaaactc 379
Query: 181 acaaaagcaaagtgtctttgattgatttctgatggtggctctgacaccattgtacttgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 acaaaagcaaagtgtctttgattgatttctgatggtggctctgacaccattgtacttgat 439
Query: 241 gtttgttacataggtgggtggatggcactcccctccttctctgtggctgctattgttcca 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtttgttacataggtgggtgggtggcactcccctccttctctgtggctgctattgttcca 499
Query: 301 aagtagatcaggatttttttttcaggaagatctggggcaacaaaagcaagaatgatgtgc 360
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 500 aagtagatcaggatttttttttcaggaagatctgggggaagaaaagcaagaatgatgtgc 559
Query: 361 tagtgacaactaggaagaccctctttagctttctgcctttcgctgcagaaatatttccta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tagtgacaactaggaagaccctctttagctttctgcctttcgctgcagaaatatttccta 619
Query: 421 aaaatcgttgggagaggtcattgtccttatcaaaccccaagttttccttacctctaaaaa 480
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aaaaccgttgggagaggtcattgtccttatcaaaccccaagttttccttacctctaaaag 679
Query: 481 gagcaaaaaatatcctagttaggtgtaccttctaagttccagggcac 527
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gagcaaaaaatatcctagttaggtgtaccttctaagttccagggcac 726
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
