Query= MSMg01no055_f21.b1 MSMg01no055_f21.b1 CHROMAT_FILE:
MSMg01no055_f21.b1 PHD_FILE: MSMg01no055_f21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:45 2005
(624 letters)
>mm_chr6_24046815_24047838
Length = 1024
Score = 1191 bits (616), Expect = 0.0
Identities = 622/624 (99%)
Strand = Plus / Minus
Query: 1 tgccctgggacatagccattcttgttggtggaggctttgccctggcagatggctgtcagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 tgccctgggacatagccattcttgttggtggaggctttgccctggcagatggctgtcagg 765
Query: 61 taatgctcagtgtggaagatatttaacaatgaactagactgttgaaaagaagaacacagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 taatgctcagtgtggaagatatttaacaatgaactagactgttgaaaagaagaacacagg 705
Query: 121 cacatccaagctttggtcatgttcctctttatcctctcatttaataatgcataattcagt 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 704 cacatccaagctttggtcatattcctctttatcctctcatttaataatgcataattcagt 645
Query: 181 agccatatattattccacacagatgatgtgtgttcatagttcaagaactttcataggcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 agccatatattattccacacagatgatgtgtgttcatagttcaagaactttcataggcta 585
Query: 241 taaatgtaatgatgtgtgttcaggaatgtcaaaagaaataatgcaaagaagattacctta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 taaatgtaatgatgtgtgttcaggaatgtcaaaagaaataatgcaaagaagattacctta 525
Query: 301 tttgtaatatattatgtccactgtcaggaagaaacaaaacttcttgagttagacagttgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 tttgtaatatattatgtccactgtcaggaagaaacaaaacttcttgagttagacagttgt 465
Query: 361 ccctttcattgatctacccaccagctgaagcaaagcatgcttctatcccttctaattgcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ccctttcattgatctacccaccagctgaagcaaagcatgcttctatcccttctaattgcc 405
Query: 421 ctgggcattgtaggtttcctagtagaaaactatctgctctaaaaattcatgggcacatgt 480
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 404 ctgggcattgtaggtttcctagtagaaaactatcttctctaaaaattcatgggcacatgt 345
Query: 481 acatacaaacaatatctaatagaatcagtagattgagtgtatatacatagaatataacac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 acatacaaacaatatctaatagaatcagtagattgagtgtatatacatagaatataacac 285
Query: 541 atataaacaaccatatgatgttaaagaagagactgggtatttaggaggggagacatggga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 atataaacaaccatatgatgttaaagaagagactgggtatttaggaggggagacatggga 225
Query: 601 caagtttggggagggaggcttgag 624
||||||||||||||||||||||||
Sbjct: 224 caagtttggggagggaggcttgag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no055_f21.g1 MSMg01no055_f21.g1 CHROMAT_FILE:
MSMg01no055_f21.g1 PHD_FILE: MSMg01no055_f21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:45 2005
(450 letters)
>mm_chr6_23874616_23875465
Length = 850
Score = 833 bits (431), Expect = 0.0
Identities = 446/451 (98%), Gaps = 2/451 (0%)
Strand = Plus / Plus
Query: 1 agatgatggtgataagttcccaggcaatgttgggactagataatgtccctctccattctc 60
|||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 agataatggtgataagttcccaggcaatgttgggactagataatgtccctctccgttctc 260
Query: 61 tgaatgactttgtggagcaaatcctccctttgctgacactggttgggcattattattaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 tgaatgactttgtggagcaaatcctccctttgctgacactggttgggcattattattcac 320
Query: 121 aaattaagaaataaacttttacgggttgatgcactattttgagtgttttcctctaaactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaattaagaaataaacttttacgggttgatgcactattttgagtgttttcctctaaactg 380
Query: 181 agccaacgctatatgctagaaagcttcaagtgaccattgagaactgctgagctgtcacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agccaacgctatatgctagaaagcttcaagtgaccattgagaactgctgagctgtcacat 440
Query: 241 cacagcagctctctgaggaatcttcatgttggcagtgaagaacaaacccattcgagctac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacagcagctctctgaggaatcttcatgttggcagtgaagaacaaacccattcgagctac 500
Query: 301 acacagcatgtct-atgggaaggagagagtccctcctaaactctgcctccatactttatg 359
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acacagcatg-cttatgggaaggagagagtccctcctaaactctgcctccatactttatg 559
Query: 360 tccacttctctccaggtgaaaaaaatcttatcacgtcaagataaaagatggatgtttccc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tccacttctctccaggtgaaaaaaatcttatcacgtcaagataaaagatggatgtttccc 619
Query: 420 aaaatgggaatgcaacggccaggttgcaagt 450
|||||||||||||||||||||||||||||||
Sbjct: 620 aaaatgggaatgcaacggccaggttgcaagt 650
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
