ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCATTCATTTCTTCACTCCAATCTAGATCCCTCCACTCACAGGCCAGGC
AATGCATAGAAAACCAAACACTGAGCATCTCCCATGTTCCAGGCTCTGTT
CTGGATACTTTATTTGTGTTTGTTGTTTGGGGTTCACAGAATATATCTTT
TCTACCATTAGCATTCCCTATGTGATGGACAGACATGAAGATAGGCTTGT
GATGCTCATCTTCTGGTACCCATGCCTTTATGTGACTGCCTTCATTTCAG
TATGTGCAGAACTTTCCGGTTACCTCCAGCCAGCCAACATCCAATGGTGA
AAGTGTTGGGATAGGTACACAGCACAGTGCCCACACTGCTAAAGTCTCTT
CCTAGCTTCTGACTTTGAAGCTTCTGAGACCCACAGTCAGTGCAATGCAA
CTCTTAACAACAAGCTGAGAGAGTTGAGAAGTGGACTTTCATGAGTTGGG
CCTTCAAAAGAAGCTACCTTAGCTGTAGCCTAGCAGAGGACCTACCTAAA
TGCATTTGGATTGCTGGCCCATGGAGACCATGGCGTTATGAATGTTGTAT
CCTCAGCCCACTCAAGGGCACGGTGTTTAGTCATGCAGCAGCAGTCAACC
AACATTGTTTTATAACGGGAGACACATGGGAATGGTAAGAACACTGCTCC
AAGCATT

AAAGAGAAGGGGGGGACTTCAATGGAAGAGAAGAGGGGGTACCAGACCCA
GGCGCGGTGGTAAGTCGTCAAAGAAAGGGGTAAGGCCGGGGTGCCTCCAC
CTTTTTTCTCAAAAAAAAGGTATACGCCATATAGGGGTTCGCCGAAAGTC
AAACTCCTCCATAAAAGCAAAAATAAATTTTGCGTGGAGGCGACGGGCGT
TTCTGCCCGTGGGTTGCTGAGCGTACCTCCTCATCCCTCCGGGATATCTG
TATTAAATACCGCCATCCGCCCTGATATTGTGTATACTCTGCGGGATACC
ACAAAAACACACACCTATTATATCCCTTTTACATGATATTGATATAGAAA
AAATAGGAAGGATTGAGCGTACATGAAAGTACAGCAAGATCCAATATAAA
GAAGTAGAAAGGTGATTAATATACAAAATATCACACCGAAGATATATTTT
TTACAAAATGTTGGTAAATTATCTACCTCTCTTAGAACTATATCAAATAA
CGTACAATCACACATGTTATCGTTTTTTTCGCCGTTTTTTCTTTTTCACG
CGCACCCAACGAACTGTTCTTGCCGTATCCTGTTGAGAGTCACTTAGCGT
TTTCTTCTCTATATACGTTATTTTTCTCCGGCGACATTGTTCTAGCTGAA
TTACTCTGAGCGACCCTTTCGTTCGCGGTGCTCACCTACTTGGATATTAT
GCGGGGTTCACTATATATATTCCTACGCTCATACTACGTTATCATCGCCC
TCCGGCGCGTTCTAAAATATATTATATAATATTCCCCCTGACGCACGAGA
CGCACGTGTAATATATATTATACCCGCCGATTAATGCACGTTTCATGGCT
GTCATACCAGAGACGCTGCCCGTTAATTTGATTAAAAACAGAACCCACGC
ACCAGGTCGCCGTAGTGCAATACGTTTAAAGTAGTTTCAGTTAAATATGT
TCACCAAAACCAAAATAAACGTATTCATTTGTATAATTATCAGGACACTA
GCATAAATAGTACCCGCGGTCTCATCATGTTACCACCCAACN

Query= MSMg01no055_i02.b1 MSMg01no055_i02.b1 CHROMAT_FILE:
MSMg01no055_i02.b1 PHD_FILE: MSMg01no055_i02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:55 2005
         (621 letters)



>mm_chr6_95324405_95325425
          Length = 1021

 Score = 1174 bits (607), Expect = 0.0
 Identities = 616/619 (99%), Gaps = 2/619 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcattcatttc-ttcactccaatctagatccctccactcacaggccaggcaatgc 62
           |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcattca-ttcattcactccaatctagatccctccactcacaggccaggcaatgc 262

                                                                       
Query: 63  atagaaaaccaaacactgagcatctcccatgttccaggctctgttctggatactttattt 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atagaaaaccaaacactgagcatctcccatgttccaggctctgttctggatactttattt 322

                                                                       
Query: 123 gtgtttgttgtttggggttcacagaatatatcttttctaccattagcattccctatgtga 182
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 323 gtgtttgttgtttggggttcacagaataaatcttttctaccattagcattccctatgtga 382

                                                                       
Query: 183 tggacagacatgaagataggcttgtgatgctcatcttctggtacccatgcctttatgtga 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tggacagacatgaagataggcttgtgatgctcatcttctggtacccatgcctttatgtga 442

                                                                       
Query: 243 ctgccttcatttcagtatgtgcagaactttccggttacctccagccagccaacatccaat 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ctgccttcatttcagtatgtgcagaactttccggttacctccagccagccaacatccaat 502

                                                                       
Query: 303 ggtgaaagtgttgggataggtacacagcacagtgcccacactgctaaagtctcttcctag 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ggtgaaagtgttgggataggtacacagcacagtgcccacactgctaaagtctcttcctag 562

                                                                       
Query: 363 cttctgactttgaagcttctgagacccacagtcagtgcaatgcaactcttaacaacaagc 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 cttctgactttgaagcttctgagacccacagtcagtgcaatgcaactcttaacaacaagc 622

                                                                       
Query: 423 tgagagagttgagaagtggactttcatgagttgggccttcaaaagaagctaccttagctg 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tgagagagttgagaagtggactttcatgagttgggccttcaaaagaagctaccttagctg 682

                                                                       
Query: 483 tagcctagcagaggacctacctaaatgcatttggattgctggcccatggagaccatggcg 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tagcctagcagaggacctacctaaatgcatttggattgctggcccatggagaccatggcg 742

                                                                       
Query: 543 ttatgaatgttgtatcctcagcccactcaagggcacggtgtttagtcatgcagcagcagt 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ttatgaatgttgtatcctcagcccactcaagggcacggtgtttagtcatgcagcagcagt 802

                              
Query: 603 caaccaacattgttttata 621
           |||||||||||||||||||
Sbjct: 803 caaccaacattgttttata 821


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space:   617721
Effective search space used:   617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)