TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCCTGTGTATTCAGTGGGAATCTAAACACTCTTGGAGGTCGAGAAGTCTG
AGGTGGAGACCAACTTTTCAAGGTATGGCAAAACTGTGGGTTGCTCTGTA
CATAAGGGCTTTGCGTTTGTCCAAAATGTTAATGAAAGAAATTCCTGAGC
TGCTGTAGCGGGAGAGTATGGGAAAATTACCGCTGGCTGGGTTTTAGATA
CTCCCCTGGCTACAGATCCAAAAATGAACTGAGGAAAAGCAGATGTGAAA
TGATCTGCTGCAGAGATGTATGGTTCCTCATTTGACTTGGATTATGACTT
TCAACTGGATTATTATCAAAAGATGTACAATTATCCAGCATGTGTTCCTC
CTCCTCTTCCTCCTCCTCCTCTTTCTCATATTTCTCAAGTTCTGGTGCCT
TTCAAATGCAAGCGTGTATCAGGGAACACCTCATGAAGGGTCAAAAGTAA
ATTAAAATCAAAGAGTGGACAACTTGGATCTTCTTCCATGTCTGGAAATC
TGAAAGGTGATGATCTTCAGGCCATTAAAAAGGAGTTGACTCCGATAAAA
CAAAAGGTGGATTCGCTGCTTTAAAGCCTGGATAATTTGAAGAAGATCAG
AGCAAACAAGCAGAGATGGCGAACGAAAAGTCTGAAGTATAGCATACCAG
CGTCTCC

CAATACAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXCCGCAAATTCTCTGTTTACTTCTATACCACATTCGTT
CGATTGCGCTTGCATTTGTAATGTCTCCTAGTGACGCTGCGTGCTGTGTA
GTCATCGTATAGTCCGTAGATTTATCAAACATCAACCCTCCCACAACACC
TTCTATATAAATAACCAACACACAAACCCAAAACAATCTAAACAACTCTC
CTACCATTTCCCATAACACACTCCCCCCCAACTCTTTCACCCCTTTTTAT
TCCTTATATCATAAAAAAAAACATACTTCAACTAAACACAATCACACTCA
ATACAACCCACCCACACCCCATAACAAAAAAACAAAAAAAATAATATAAA
TATACACCCAAACACAACCCCATCAATCTCTATTACAACAAAAATACCTA
CACTATACCCAACCTCCCTTCAACATATCTCCAAACACACACCACCCACC
ATCCCTCTCTCCTTCTTCCCCTCCTCTCATTTACCCCCCCCCCCACCCAA
CATTATTATCCTCTACCACTCACCACCCATAACCATCTACTTCCCAATAT
ACGCAATTTTCTATACACCCACATTAAACCTACATTCACACAAACACACC
ACCCATTATTAACCTCACCTCACCAACAACACAAAATATACAACAACACC
AAATTAACATCATCACCCCTATCACCATTTTCATCCCTCTCACTCCCCCA
CAACAACATAATACAAAAAAATATCCCCCTCACCCTCAAACTCACATATA
CAAAAAATAATACCCACCCCAAAATACACACCTTTCTCCACATACTACCC
CTCCACACCCACCCACATATACAATTTAAACACAACACCCCAACCCCTAT
CTCATACAAATCTATCATCTATACAAACACACACACACAACCATTTCTCA
CAAACAACACTAAACCACATATATTCAATTCAAATCACTCATCACCACAC
AAACCTAATAAATACCACCACCACATATCACCAATCTAACCCCATATTAN

Query= MSMg01no055_m04.b1 MSMg01no055_m04.b1 CHROMAT_FILE:
MSMg01no055_m04.b1 PHD_FILE: MSMg01no055_m04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:15 2005
         (582 letters)



>mm_chr6_75333422_75334403
          Length = 982

 Score = 1038 bits (537), Expect = 0.0
 Identities = 549/553 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctgtgtattcagtgggaatctaaacactcttggaggtcgagaagtctgaggtgg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gaattcctgtgtattcagtgggaatctaaacactcttggaggtcgagaagtctgaggtgg 494

                                                                       
Query: 65  agaccaacttttcaaggtatggcaaaactgtgggttgctctgtacataagggctttgcgt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 agaccaacttttcaaggtatggcaaaactgtgggttgctctgtacataagggctttgcgt 434

                                                                       
Query: 125 ttgtccaaaatgttaatgaaagaaattcctgagctgctgtagcgggagagtatgggaaaa 184
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 433 ttgtccaaaatgttaatgaaagaaattcctgagctgctgtagcaggagagtatgggaaaa 374

                                                                       
Query: 185 ttaccgctggctgggttttagatactcccctggctacagatccaaaaatgaactgaggaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ttaccgctggctgggttttagatactcccctggctacagatccaaaaatgaactgaggaa 314

                                                                       
Query: 245 aagcagatgtgaaatgatctgctgcagagatgtatggttcctcatttgacttggattatg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aagcagatgtgaaatgatctgctgcagagatgtatggttcctcatttgacttggattatg 254

                                                                       
Query: 305 actttcaactggattattatcaaaagatgtacaattatccagcatgtgttcctcctcctc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 actttcaactggattattatcaaaagatgtacaattatccagcatgtgttcctcctcctc 194

                                                                       
Query: 365 ttcctcctcctcctctttctcatatttctcaagttctggtgcctttcaaatgcaagcgtg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ttcctcctcctcctctttctcatatttctcaagttctggtgcctttcaaatgcaagcgtg 134

                                                                       
Query: 425 tatcagggaacacctcatgaagggtcaaaagtaaattaaaatcaaagagtggacaacttg 484
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 133 tatcagggaacacctcatgaagggtcaaaagtaaattaaaatcaaagagtggacaactgg 74

                                                                       
Query: 485 gatcttcttccatgtctggaaatctgaaaggtgatgatcttcaggccattaaaaaggagt 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 73  gatcttcttccatgtctggaaatctgaaaggtgatgatcttcaggccattaaaaaggagc 14

                        
Query: 545 tgactccgataaa 557
           ||||||| |||||
Sbjct: 13  tgactccaataaa 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space:   555984
Effective search space used:   555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)