Query= MSMg01no056_i11.b1 MSMg01no056_i11.b1 CHROMAT_FILE:
MSMg01no056_i11.b1 PHD_FILE: MSMg01no056_i11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:58:13 2005
(398 letters)
>mm_chr6_7413610_7414410
Length = 801
Score = 706 bits (365), Expect = 0.0
Identities = 391/401 (97%), Gaps = 3/401 (0%)
Strand = Plus / Minus
Query: 1 tcatcctggtttcctagtcttgagggcagagatgtaaattgagatttcccaaatatcctc 60
|||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 601 tcattctggtttcctagtcttgagggcagagatgtaaattgagatttcttaaatatgctc 542
Query: 61 ctttattgtctgggtgcaaaaggcaggataagagctcttgcatgtctaaccttgacactc 120
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 541 ctttattgtctgggtgcaagaggcaggataagagctcatgcatgtctaaccttgacactc 482
Query: 121 ttcttggcggacttcccagggcttggagcaggctcttttcctgctctggctgggagcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttcttggcggacttcccagggcttggagcaggctcttttcctgctctggctgggagcttt 422
Query: 181 ccagagattcacatggcctgtaatactatctcagaatctcataattgcatc---tttagt 237
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 421 ccagagattcacatggcctgtaatactatctcagaatctcataattgcatcttttttagt 362
Query: 238 ccttatcatttcacagtcttaagactccatccatacaggccagttgctgcaaggacagag 297
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccttatcagttcacagtcttaagactccatccatacaggccagttgctgcaaggacagag 302
Query: 298 tggcttcgtacctcacggtggaatatgagcttctggcaaacatggtagcttgacgaagac 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tggcttcgtacctcacggtggaatatgagcttctggcaaacatggtagcttgacgaagac 242
Query: 358 atcagacccctcccttccctaagctagattggaataaaagg 398
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atcagacccctcccttccctaagctagattggaataaaagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 398
Length of database: 801
Length adjustment: 9
Effective length of query: 389
Effective length of database: 792
Effective search space: 308088
Effective search space used: 308088
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no056_i11.g1 MSMg01no056_i11.g1 CHROMAT_FILE:
MSMg01no056_i11.g1 PHD_FILE: MSMg01no056_i11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:58:13 2005
(245 letters)
>mm_chr6_7246901_7247547
Length = 647
Score = 451 bits (233), Expect = e-131
Identities = 243/247 (98%), Gaps = 2/247 (0%)
Strand = Plus / Plus
Query: 1 aattccttaccatcatgaagcgaattacaaatgacagtcattacctagtccggaaaaggc 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 aattccttaccatcatgaagcgaattacaaatgacagtcattacctagtcaggaaaaggc 260
Query: 61 ccgaggatgaagatcaaatggcaagatgttttaatatgtttgctttcaacatttctata- 119
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaaggatgaagatcaaatggcaagatgttttaatatgtttgctttcaacatttctatat 320
Query: 120 -tttttttaacaatgagagtacaatatatttaaaataaaacttcttaagtacaaatagta 178
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttttttaacaatgagagtacaatatatttaaaataaaacttcttaagtacaaatagta 380
Query: 179 gaattttgaggattgtgccatgcaaattgttaagtagttaagtagtttagctgctaggtt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaattttgaggattgtgccatgcaaattgttaagtagttaagtagtttagctgctaggtt 440
Query: 239 acaatga 245
|||||||
Sbjct: 441 acaatga 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 647
Length adjustment: 9
Effective length of query: 236
Effective length of database: 638
Effective search space: 150568
Effective search space used: 150568
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
