Query= MSMg01no057_f14.b1 MSMg01no057_f14.b1 CHROMAT_FILE:
MSMg01no057_f14.b1 PHD_FILE: MSMg01no057_f14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:16 2005
(239 letters)
>mm_chr6_4330772_4331410
Length = 639
Score = 445 bits (230), Expect = e-129
Identities = 233/234 (99%)
Strand = Plus / Plus
Query: 6 gaattcaaagaaaattgccgttttccctaaaagttcttagcaaaatattaaatgagaaat 65
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcaaagaaaattgctgttttccctaaaagttcttagcaaaatattaaatgagaaat 265
Query: 66 caaaagggttcagtgttctgtgaacaaccgcatgtccataagcccaaagctgaagccata 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 caaaagggttcagtgttctgtgaacaaccgcatgtccataagcccaaagctgaagccata 325
Query: 126 ccaagatagcagttaaaattgattgttaatttaacagagataaagataattatgaataca 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ccaagatagcagttaaaattgattgttaatttaacagagataaagataattatgaataca 385
Query: 186 aacttattactagtatagatcatagtattttattcccatggtagtctgagctga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aacttattactagtatagatcatagtattttattcccatggtagtctgagctga 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no057_f14.g1 MSMg01no057_f14.g1 CHROMAT_FILE:
MSMg01no057_f14.g1 PHD_FILE: MSMg01no057_f14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:16 2005
(307 letters)
>mm_chr6_4463384_4464090
Length = 707
Score = 586 bits (303), Expect = e-172
Identities = 306/307 (99%)
Strand = Plus / Minus
Query: 1 tctttttgatactccccagaaagtaatttcaaagacaggggaatctgaaatccatatcaa 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 507 tctttttgatactccccagaaagtagtttcaaagacaggggaatctgaaatccatatcaa 448
Query: 61 tttctcagatgtatgtccaccattctaatttttaacataagaggacatctactcctgctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tttctcagatgtatgtccaccattctaatttttaacataagaggacatctactcctgctt 388
Query: 121 tatttcccactttggctcttcttgagaaatggattctactttacatgtgagtaatgtctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tatttcccactttggctcttcttgagaaatggattctactttacatgtgagtaatgtctg 328
Query: 181 gcattagcagaaacaactcatttcaaatgtctaagacaaacaatgtcgaaagaatgcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gcattagcagaaacaactcatttcaaatgtctaagacaaacaatgtcgaaagaatgcttc 268
Query: 241 aatttttcacttcaaatatgaatgttttaaattacaaggaaaaatcaggaaattggaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aatttttcacttcaaatatgaatgttttaaattacaaggaaaaatcaggaaattggaaat 208
Query: 301 catcaat 307
|||||||
Sbjct: 207 catcaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 307
Length of database: 707
Length adjustment: 9
Effective length of query: 298
Effective length of database: 698
Effective search space: 208004
Effective search space used: 208004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
