XXXXXXXXXXXXXXXXXXXXXXXXXXTCCAAGAGGATCCGCGGAATTCCT
ACACTCCTAAAAATAATTAGACCATATCATCCCCCTCTTCCTCCAACTGT
TTTTAGAGTCCCTCCACCACTTCCTCATCCCAACTTATGCTCTCTGCAGA
TCCCAGTGAGTGCACTCAGTGCATGCATAGGTAGAAGGCTATCATCTGAA
ACTTGGAAACCCGCTAAGACCCACTTTTCTGAAGACAGTCAGCCCTTCTT
AAGCCAGCATCCAGCTCCTTAGCTCAGAGTGGGGCATTGTGAGCCCCTAT
CATCTGTGCTGGAATTTTGACTGGCTTAACTTCTTGAATGTTAATCAGAG
CTGCTGTGATTTCCTGAGCGCCTCTGTACTGTCATGACTAGAAGACTCTG
TTTCACAGTGGTTCACCTTAACCTGTGGTGCCTCCAGTCTTTTTCAATGG
TTCCTAAGCCATAAAGATGGGGGCAGTGTGTGCTATAGGTGATCCATTTA
GTACTGAACACCTCACACTTACTCATTTTCTGACTGCTCTGAAGCAGTCT
GTGTATTAATGATCACCCTTTGCAAGATGGAAGCTTTTCTGATGAAGGCA
AACTACTGTTCTTAAATAGCTTTTAATCATAATTTTAACAAAAGCATATG
CGGGACATAATTATCTGATCACTTACACCATTGTACCCTA

NNNAACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTCACACTATCCTTTCTTACCTGC
TCTCTGTACCAAACTAGCCATCATTTGTCGCTAGTTCTCAGTTTATATGA
GGGAGATTCAGGTGCCCTGATGTCTACTTAAAAAATACCTTTGATTCTCC
CAATATCTCACATCTGTACTTTACTAAAACAATATGGTTACAGGCCCTTC
ATTCTCTTTTCAACAGCAAGCACTTCTTTTTAGATATACTTACTAAAGGA
AGAAATAAGTGGAAAACTTTAGAAACAAATTTTATCTCATCCTTATTCTT
AGGGGATGGCATTATTTTCATTTCTAGAATTTTATAAAAACCTCAAGAAT
TGATGCATTAAAAAATTCTAGGAATGATGGGAAGGTAAAGATTGTAATAT
GTAGTCACAGTCCTGAGGAAGCACTATTTCATCATCTGATAAATCTTCAT
AGGTGCTTCCCTTACTAGCAATTACAAAGATGAAATCAATTAATTATTAA
CCACAGGTACAGCATGTTAGACAAAACACTGATAAACAGTGTATAAAAGA
GAGATAGCTGAGAAAAAGGTTTTCATCTATGACCATTCATGTAGACAATC
TATGCATTAAATAGCAATCCAAGAGTAGACTTTGAGAGCCAACTGGCTGA
TA

Query= MSMg01no058_m05.g1 MSMg01no058_m05.g1 CHROMAT_FILE:
MSMg01no058_m05.g1 PHD_FILE: MSMg01no058_m05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:06 2005
         (518 letters)



>mm_chr6_16775484_16776401
          Length = 918

 Score =  876 bits (453), Expect = 0.0
 Identities = 501/517 (96%), Gaps = 2/517 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcacactatcctttcttacctgctctctgtaccaaactagccatcatttgtcgctagttc 60
           |||||||||||||||| |||||||||||||||||| ||||||||||||  ||  ||||||
Sbjct: 201 tcacactatcctttctcacctgctctctgtaccaagctagccatcattcatcattagttc 260

                                                                       
Query: 61  tcagtttatatgagggagattcaggtgccctgatgtctacttaaaaaatacctttgattc 120
            ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 261 -cagtttatatgagggagattcaggtgccctgatgtctgcttaaagaatacctttgattc 319

                                                                       
Query: 121 tcccaatatctcacatctgtactttactaaaacaatatggttacaggcccttcattctct 180
           |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 320 tcccaatatctcacatctatactttactaaaacaatctggttacaggcccttcattctct 379

                                                                       
Query: 181 tttcaacagcaagcacttctttttagatatacttactaaaggaagaaataagtggaaaac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tttcaacagcaagcacttctttttagatatacttactaaaggaagaaataagtggaaaac 439

                                                                       
Query: 241 tttagaaacaaattttatctcatccttattcttaggggatggcattattttcatttctag 300
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tttagaaataaattttatctcatccttattcttaggggatggcattattttcatttctag 499

                                                                       
Query: 301 aattttataaaaacctcaagaattgatgcattaaaaaa-ttctaggaatgatgggaaggt 359
           || |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 500 aactttatacaaacctcaagaattgatgcattaaaaaaattctaggaatgatgggaaggt 559

                                                                       
Query: 360 aaagattgtaatatgtagtcacagtcctgaggaagcactatttcatcatctgataaatct 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aaagattgtaatatgtagtcacagtcctgaggaagcactatttcatcatctgataaatct 619

                                                                       
Query: 420 tcataggtgcttcccttactagcaattacaaagatgaaatcaattaattattaaccacag 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tcataggtgcttcccttactagcaattacaaagatgaaatcaattaattattaaccacag 679

                                                
Query: 480 gtacagcatgttagacaaaacactgataaacagtgta 516
           |||||||||||||||||||||||| ||||||||||||
Sbjct: 680 gtacagcatgttagacaaaacactaataaacagtgta 716


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space:   461264
Effective search space used:   461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)