Query= MSMg01no059_n18.b1 MSMg01no059_n18.b1 CHROMAT_FILE:
MSMg01no059_n18.b1 PHD_FILE: MSMg01no059_n18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:28 2005
(538 letters)
>mm_chr6_147298045_147298982
Length = 938
Score = 988 bits (511), Expect = 0.0
Identities = 529/535 (98%)
Strand = Plus / Minus
Query: 4 gaattccatctgggttacgacggagaacatgaagctgtgtctcctcagtctagactggag 63
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gaattccatctgggagaggacggagaacatgaagctgtgtctcctcagtctagactggag 679
Query: 64 gtgagatggcattccagtggtcactaagagatgaggctcctacaacaccaagcaaaatgg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gtgagatggcattccagtggtcactaagagatgaggctcctacaacaccaagcaaaatgg 619
Query: 124 ctgattcatggcaattcctcaacaaacaacaacaccaagtgggatgtctggttcaagaca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ctgattcatggcaattcctcaacaaacaacaacaccaagtgggatgtctggttcaagaca 559
Query: 184 attcctcaaccaacatcagttccacttcctctttttgttttcttcccctcactcctcccc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 attcctcaaccaacatcagttccacttcctctttttgttttcttcccctcactcctcccc 499
Query: 244 tctatctaaaaggtagtatgtcagtctcccccatttcatgttgtgttgatgggagatcac 303
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 498 tctatctaaaaggtagtatgtcagtctcccccatttcaggctgtgttgatgggagatcac 439
Query: 304 attcattcagacactagcagcaagttcaccaattcacatacccccaaaaggctccaggaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 attcattcagacactagcagcaagttcaccaattcacatacccccaaaaggctccaggaa 379
Query: 364 agaaatcagtacatcacacacttttaggaaaaggagggagggatatctggcagaaatgtg 423
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 agaaatcagtagatcacacacttttaggaaaaggagggagggatatctggcagaaatgtg 319
Query: 424 gtttgaagaaacaggaaactaatgtcaagaaagggaaatgcatgggctctctgtcaataa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gtttgaagaaacaggaaactaatgtcaagaaagggaaatgcatgggctctctgtcaataa 259
Query: 484 tctttcagagtgaccttagcgtttgaaacaatctgtggtttgatttacccagata 538
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tctttcagagtgaccttagcgtttgaaacaatctgtggtttgatttacccagata 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space: 489984
Effective search space used: 489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no059_n18.g1 MSMg01no059_n18.g1 CHROMAT_FILE:
MSMg01no059_n18.g1 PHD_FILE: MSMg01no059_n18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:28 2005
(442 letters)
>mm_chr6_147151733_147152574
Length = 842
Score = 824 bits (426), Expect = 0.0
Identities = 438/446 (98%), Gaps = 8/446 (1%)
Strand = Plus / Plus
Query: 1 aaggagtagtaggcagataagacacaatttatttcaaggcaatagactgctaggcaggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggagtagtaggcagataagacacaatttatttcaaggcaatagactgctaggcaggca 260
Query: 61 gaagccagcaggcacccaggcacacacaaagtccagtacatagacctacataggctgact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaagccagcaggcacccaggcacacacaaagtccagtacatagacctacataggctgact 320
Query: 121 ggttaaggcaaaaggcaaagaaactggtacctgatcactaagccatgtttatacagaacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggttaaggcaaaaggcaaagaaactggtacctgatcactaagccatgtttatacagaacc 380
Query: 181 acgcccaaatgccattatcaaataatttacttttggggtctgtggtcatttgaatgagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acgcccaaatgccattatcaaataatttacttttggggtctgtggtcatttgaatgagaa 440
Query: 241 tgaccccatatctttgaataattggtccccagttgcaggaactgtttgggaaggattagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgaccccatatctttgaataattggtccccagttgcaggaactgtttgggaaggattagg 500
Query: 301 aggtatggctttgttggaggaggtgagtcacaggtggcgggcttacccc----ttcaaaa 356
||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 501 aggtatggctttgttggaggaggtgagtcacaggtggcgggctta----aggtttcaaaa 556
Query: 357 gttccctgccaccccagtatactatctgcttttgttagtggatggggattagagctctga 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gttccctgccaccccagtatactatctgcttttgttagtggatggggattagagctctga 616
Query: 417 gctgtgccatgactacctgtctgtgg 442
||||||||||||||||||||||||||
Sbjct: 617 gctgtgccatgactacctgtctgtgg 642
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
