TCATGGAAACAAAATTTTGTAACTTCGGCTGGCATCCGTAATTAGGAAGA
GAGAAACCGGAGGGCGGCCGGGTCGTATTATCATTTTATACTAGAAAGGG
GAACGCACGNATCTCTACTCATTCTCCCTCCGTACCAACATCGGCCAATC
CCGTTTGGAAATCCCATGTCGTCCTGCTTGAACCGTCCAGCGGGATGTTC
CGATTTGTTCCCTCTTTGCATCCGTAAGAATTCCGACAAACAATACAACA
CTCAAGAGCCCGCCGCCCGCCGCACTGTGCCCCCGGGGTGAATTTGCTNN
NNCCAAATCTCATAAATTGGGGGGCGGGCTAATAAGCACTCCACTATAGG
TCAGCAGAATCGGCGGGAAATTCCCTTGGATACTATCTTGAATTCAAGGA
CAAGCCTTCTGGGTCATCCTTTTTTAAAAAATCACAGGAAATTATTGTTT
CTCACAGCAACGGGATAAAATGGAAGGGAAATGTAAGTTTTTCCAAAAAA
ATTTTGGAAAATAAAATTTTTCCTTAAGAAAAAAAAAAGGGTTAAAAATT
TAAAAATTTTTAAAAAAAGGGGAAAGTTTGGGCAAAGGGGTTCCGGG

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCACATTAACTTAAATACTCACTAATTTTTGA
TGGCTGCTTTTGTGCTATAGTTATTGTGTATGATTTTGTTGTTTTTCTCG
GCACATTGACAAAGGATGAAATGTTATCTATCAGTGCACATTAATTTGAA
AGGCATTCTCTTTCTTGTGAGTTTTCTAGCGTCTTAAAAAAACAAAAATA
AAAACAAAAAACAAAAAACAAAAAACAAAAAACAGGAACACATCCAAACC
TCCATGAAAGGGAATTGAATTGAAACCATGATACTCAGCAAATTTTTTCA
ATAGGTTTATTCTTTCATTGCTGTGTAATTAACCTCATATTGAGAATTCT
ATTGCAAATTCTTTTTCAGGAGCAAATTAAACATTTGGTTTTCAGACTAT
CATATTTCTGTGAAAGTGAGAATTGTGTCACTGGAAAACAGATGAGCTAT
ACTGTGAGGGGTTGTCAATGAAGCCATATTTACCCTGAAGGAAAATATAG
AATTTTTAATAAAAAAAATACAATACAAACTCTACCCCAAATATATCAAG
TCTCATAAAGTAACCTCGTTAGCATGGCCATCACCTTACAGATAATGAAT
AATTTTCTGGTAAAGGCCCCAATGGGATTCTATGGT

Query= MSMg01no060_h22.g1 MSMg01no060_h22.g1 CHROMAT_FILE:
MSMg01no060_h22.g1 PHD_FILE: MSMg01no060_h22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:14 2005
         (545 letters)



>mm_chr6_45045048_45045992
          Length = 945

 Score =  971 bits (502), Expect = 0.0
 Identities = 539/560 (96%), Gaps = 16/560 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   cacattaacttaaatac-tcactaatttttgatggctgcttttgtgctatagttattgtg 59
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 899 cacattaacttaaatacatcactaatttttgatggctgcttttgtgctatagttattgtg 840

                                                                       
Query: 60  tatgattttgttgtttttctcggcacattgacaaaggatgaaatgttatctatcagtgca 119
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 839 tatgattttgttgtttttctcggcatattgacaaaggatgaaatgttatctatcagtgca 780

                                                                       
Query: 120 cattaatttgaaaggcattctctttcttgtgagttttctagcgtcttaaaaaaacaaaaa 179
           |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 779 cattaatttgaaaggcattctctttcttgtgaattttctagcatcttaaaaaaacaaaaa 720

                                                                       
Query: 180 taaaaacaaaaaacaaaaaa--------------caaaaaacaaaaaacaggaacacatc 225
            |||||||||||||||||||              ||||||||||||||||||||||||||
Sbjct: 719 caaaaacaaaaaacaaaaaacaaaaaacaaaaaccaaaaaacaaaaaacaggaacacatc 660

                                                                       
Query: 226 caaacctccatgaaagggaattgaattgaaaccatgatactcagcaaattttttcaatag 285
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 caaacctccatgaaaggaaattgaattgaaaccatgatactcagcaaattttttcaatag 600

                                                                       
Query: 286 gtttattctttcattgctgtgtaattaacctcatattgagaattctattgcaaattcttt 345
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 gtttattctttcattgctgtgtaattaacctcatattgagaattctattgcaaattcttt 540

                                                                       
Query: 346 ttcaggagcaaattaaacatttggttttcagactatcatatttctgtgaaagtgagaatt 405
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ttcaggagcaaattaaacatttggttttcagactatcatatttctgtgaaagtgagaatt 480

                                                                       
Query: 406 gtgtcactggaaaacagatgagctatactgtgaggggttgtcaatgaagccatatttacc 465
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gtgtcactggaaaacagatgagctatactgtgaggggttgtcaatgaagccatatttacc 420

                                                                       
Query: 466 ctgaaggaaaatatagaatttttaataaaaaaaatacaatacaaactctaccccaaatat 525
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 419 ctgaaggaaaatatagaatttttaat-aaaaaaatacaatacaaactctaccccaaatat 361

                               
Query: 526 atcaagtctcataaagtaac 545
           ||||||||||||||||||||
Sbjct: 360 atcaagtctcataaagtaac 341


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space:   500225
Effective search space used:   500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)