CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCCTAATACTTAAAATATAATTAGACCATATCATCCCCCTCTTCCT
CCAACTGTTTTTAGAGTCCCTCCACCACTTCCTCATCCCAACTTATGCTC
TCTGCAGATCCCAGTGAGTGCACTCAGTGCATGCATAGGTAGAAGGCTAT
CATCTGAAACTTGGAAACCCGCTAAGACCCACTTTTCTGAAGACAGTCAG
CCCTTCTTAAGCCAGCATCCAGCTCCTTAGCTCAGAGTGGGGCATTGTGA
GCCCCTATCATCTGTGCTGGAATTTTGACTGGCTTAACTTCTTGAATGTT
AATCAGAGCTGCTGTGATTTCCTGAGCGCCTCTGTACTGTCATGACTAGA
AGACTCTGTTTCACAGTGGTTCACCTTAACCTGTGGTGCCTCCAGTCTTT
TTCAATGGTTCCTAAGCCATAAAGATGGGGGCAGTGTGTGCTATAGGTGA
TCCATTTAGTACTGAACACCTCACACTTACTCATTTTCTGACTGCTCTGA
AGCAGTCTGTGTATTAATGATCACCCTTTGCAAGATGGAAGCTTTTCTGA
TGAAGGCAAACTACTGTTTTTAAATAGCTTTTAATCATAATTTTAACAAA
AGCATATGTGGGACAGAATTATCTGAGCACTTAGACCATTGTACCAGAAA
GGTTGCAGATACTATAACAAG

GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXATCACACTATCCTTTCTTACCTGCTCTCTGTAC
CAAACTAGCCATCATTTGTCGCTAGTTCTCAGTTTATATGAGGGAGATTC
AGGTGCCCTGATGTCTACTTAAAAAATACCTTTGATTCTCCCAATATCTC
ACATCTGTACTTTACTAAAACAATATGGTTACAGGCCCTTCATTCTCTTT
TCAACAGCAAGCACTTCTTTTTAGATATACTTACTAAAGGAAGAAATAAG
TGGAAAACTTTAGAAACAAATTTTATCTCATCCTTATTCTTAGGGGATGG
CATTATTTTCATTTCTAGAATTTTATAAAAACCTCAAGAATTGATGCATT
AAAAAATTCTAGGAATGATGGGAAGGTAAAGATTGTAATATGTAGTCACA
GTCCTGAGGAAGCACTATTTCATCATCTGATAAATCTTCATAGGTGCTTC
CCTTACTAGCAATTACAAAGATGAAATCAATTAATTATTAACCACAGGTA
CAGCATGTTAGACNAAACACTGACTAACAGTGTAGAAAAGAGAGATAGCT
GAGAAAAAGGTTTTCATCTATGACCATTCATGTAGACAATCTATGCTTTA
AATAGCAATCCAAGAGTAGATTTTGAGAGTCAATTGCCTGATATATCCAG
AAAGCATTTTGACCAGGAGAGTCATTGATGTCTGTGAAAAG

Query= MSMg01no061_b15.g1 MSMg01no061_b15.g1 CHROMAT_FILE:
MSMg01no061_b15.g1 PHD_FILE: MSMg01no061_b15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:59 2005
         (488 letters)



>mm_chr6_16775483_16776370
          Length = 888

 Score =  830 bits (429), Expect = 0.0
 Identities = 474/489 (96%), Gaps = 2/489 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atcacactatcctttcttacctgctctctgtaccaaactagccatcatttgtcgctagtt 60
           ||||||||||||||||| |||||||||||||||||| ||||||||||||  ||  |||||
Sbjct: 201 atcacactatcctttctcacctgctctctgtaccaagctagccatcattcatcattagtt 260

                                                                       
Query: 61  ctcagtttatatgagggagattcaggtgccctgatgtctacttaaaaaatacctttgatt 120
           | ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 261 c-cagtttatatgagggagattcaggtgccctgatgtctgcttaaagaatacctttgatt 319

                                                                       
Query: 121 ctcccaatatctcacatctgtactttactaaaacaatatggttacaggcccttcattctc 180
           ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 320 ctcccaatatctcacatctatactttactaaaacaatctggttacaggcccttcattctc 379

                                                                       
Query: 181 ttttcaacagcaagcacttctttttagatatacttactaaaggaagaaataagtggaaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttttcaacagcaagcacttctttttagatatacttactaaaggaagaaataagtggaaaa 439

                                                                       
Query: 241 ctttagaaacaaattttatctcatccttattcttaggggatggcattattttcatttcta 300
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctttagaaataaattttatctcatccttattcttaggggatggcattattttcatttcta 499

                                                                       
Query: 301 gaattttataaaaacctcaagaattgatgcattaaaaaa-ttctaggaatgatgggaagg 359
           ||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 500 gaactttatacaaacctcaagaattgatgcattaaaaaaattctaggaatgatgggaagg 559

                                                                       
Query: 360 taaagattgtaatatgtagtcacagtcctgaggaagcactatttcatcatctgataaatc 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 taaagattgtaatatgtagtcacagtcctgaggaagcactatttcatcatctgataaatc 619

                                                                       
Query: 420 ttcataggtgcttcccttactagcaattacaaagatgaaatcaattaattattaaccaca 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttcataggtgcttcccttactagcaattacaaagatgaaatcaattaattattaaccaca 679

                    
Query: 480 ggtacagca 488
           |||||||||
Sbjct: 680 ggtacagca 688


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 888
Length adjustment: 10
Effective length of query: 478
Effective length of database: 878
Effective search space:   419684
Effective search space used:   419684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)