XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTTAAGG
AGACCAACAAAAATGCTCAAGGAATTACAGGAAAAGACCACTTAACAGAT
AAAAGACCTTAAAGAGGAACCACAAAAATCCCTTAAAGAACTACAGAAAA
ACACAACCAAACAGATGATGGAATTGAATAAAACCATCCAAGATCTAAAA
AATGGAAGTAGAAACAATGAAGAAAACACAAAGGGAAAGAAATCTGGAGA
TAGAAACCCTAGGAAAGAAATCAGGAAACATAGATGTGAGCATCAGCAAC
AGAATACAAGAGATAGAAGTGAGAATCTCAGGTGCAGAAGTTCCATAGAG
AACATGGGCACACACAATCAAGAAAATGCAAAATGCAAAAAGATCCTAAC
TCAAAACATCCAGGAAATCCAGGACACAATGAGAAGAGAAAACCTACAGA
TAATAGGAGTGTTGAGAATGAAGATTTTCAACTTAAAGGGCCAGCAACTA
TCTTCAACAAAATTATAGAAGAAAACGTACCATACCTAAAAAAAGAGATG
CCCATGAACATACAAGAAGCCTACAGAACTCCAAATACACTGGAACAGAG
AAGAAATTCCTCCCAACACATAATAACAAGAACAACAAATGTACTAAATA
AAGATAGACTATTAAAAGCAGTAAGGGAAAAAGGTCAAGTAACATATAAA
GGCAGGCCTATTAGAATTACTCCAGACTTCTCACCAGA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXCTAGTTCATTTTAGTAAGCTACAACTAGGATATGAGA
ATGGTTTCCTGTATAGTTTTTAGAGGAAAAATAAAATGATTGACTTGAGA
CTTAGAACCTCTCTACCTTTAAAAGTATTTTCAAAATCATTCCACATAGT
AATACCTTTTAGAAGCTGATAAACTCTTGACTAATACTTCTTAGTGCTTA
CATGTTCTAAGTTCAGATGTTAATAATGTTTTCACATGTGCAGTATTACT
GGACTTAGAGTGTCAGGCCATGCGGTAGGAAAAAAAAAAACAACTTTGGT
TTACCTGTATATGGAAAAAGAAAATACTTTATTTTCAAGACAGGTTCCAA
AGAAGTATCCCATGAGTTTTTTAGTCTTCCTAATGATAATAAAGATTTCA
TTACTTGTAGACTTTGTTTTGTGGATTATTACCGGCCCAGAACCTAAGAG
AACTTAGGATGTAGTAGTAGGAGCATCCTTAATTAATGCCTAGGTATGGA
AATTCATGACATATATTATGAAAAAGTAAGACAGTTTTCTTTATTTTAGA
TTGAAAATATATCATTTAGATTTAGATCCACCCTAGTTTTAAATTGAGAT
CAAAACGATAGTCATAAAATGTAAGCTTAGGCATTGTGATGTCTGAACGT
CACTGCCAACTGTCTTGATTTAGTAGTGAGCAGCAGAC

Query= MSMg01no061_g24.g1 MSMg01no061_g24.g1 CHROMAT_FILE:
MSMg01no061_g24.g1 PHD_FILE: MSMg01no061_g24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:24 2005
         (620 letters)



>mm_chr6_13540311_13541331
          Length = 1021

 Score = 1123 bits (581), Expect = 0.0
 Identities = 608/617 (98%), Gaps = 1/617 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   ttcattttagtaagctacaactaggatatgagaatggtttcctgtatagtttttaga-gg 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 821 ttcattttagtaagctacaactaggatatgagaatggtttcctgtatagtttttagaggg 762

                                                                       
Query: 64  aaaaataaaatgattgacttgagacttagaacctctctacctttaaaagtattttcaaaa 123
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 761 aaaaataaaatgattgacttgagacttagaacctctctgcctttaaaagtattttcaaaa 702

                                                                       
Query: 124 tcattccacatagtaataccttttagaagctgataaactcttgactaatacttcttagtg 183
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 tcattccacatcgtaataccttttagaagctgataaactcttgactaatacttcttagtg 642

                                                                       
Query: 184 cttacatgttctaagttcagatgttaataatgttttcacatgtgcagtattactggactt 243
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 641 cttacatgttctaagttcagatgttaataatgttttcacatgtgaagtattactggactt 582

                                                                       
Query: 244 agagtgtcaggccatgcggtaggaaaaaaaaaaacaactttggtttacctgtatatggaa 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 agagtgtcaggccatgcggtaggaaaaaaaaaaacaactttggtttacctgtatatggaa 522

                                                                       
Query: 304 aaagaaaatactttattttcaagacaggttccaaagaagtatcccatgagttttttagtc 363
           ||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||
Sbjct: 521 aaagaaaatactttattttcaagacaggttccaaagaagtatttcatgagttgtttagtc 462

                                                                       
Query: 364 ttcctaatgataataaagatttcattacttgtagactttgttttgtggattattaccggc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ttcctaatgataataaagatttcattacttgtagactttgttttgtggattattaccggc 402

                                                                       
Query: 424 ccagaacctaagagaacttaggatgtagtagtaggagcatccttaattaatgcctaggta 483
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 401 ccagaacctaagagaacttaggatgtagtagtaggggcatccttaattaatgcctaggta 342

                                                                       
Query: 484 tggaaattcatgacatatattatgaaaaagtaagacagttttctttattttagattgaaa 543
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tgaaaattcatgacatatattatgaaaaagtaagacagttttctttattttagattgaaa 282

                                                                       
Query: 544 atatatcatttagatttagatccaccctagttttaaattgagatcaaaacgatagtcata 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 atatatcatttagatttagatccaccctagttttaaattgagatcaaaacgatagtcata 222

                            
Query: 604 aaatgtaagcttaggca 620
           |||||||||||||||||
Sbjct: 221 aaatgtaagcttaggca 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1021
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1011
Effective search space:   616710
Effective search space used:   616710
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)